RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 CAPS2Q9BXY5 557 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 PLCB1Q9NQ66 1216 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 ANKRD44Q8N8A2 993 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 BMP15O95972 392 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 PRPHP41219 470 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 TDRD12Q587J7 1177 aaKnown RBP7.97□□□□□ -1.13
SMC1A-201ENST00000322213 PLVAPQ9BX97 442 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 ODF2LQ9ULJ1 636 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 MAP3K4Q9Y6R4 1608 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 NCBP1Q09161 790 aaKnown RBP7.97□□□□□ -1.13
SMC1A-201ENST00000322213 A0A087WZG4 1122 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 IRX1P78414 480 aaPredicted RBP7.97□□□□□ -1.13
SMC1A-201ENST00000322213 ATP2B3Q16720 1220 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 PDE11AQ9HCR9 933 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 SLC12A7Q9Y666 1083 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 MRC2Q9UBG0 1479 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 FRMPD1Q5SYB0 1578 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 GOLGA8KD6RF30 607 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 MYL5Q02045 173 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 DNA2P51530 1060 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 FKBP4Q02790 459 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMC1A-201ENST00000322213 SULT6B1Q6IMI4 303 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 TCHPQ9BT92 498 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 RIMS2Q9UQ26 1411 aa7.97□□□□□ -1.13
SMC1A-201ENST00000322213 CCT2P78371 535 aaKnown RBP7.96□□□□□ -1.13
SMC1A-201ENST00000322213 WWC2Q6AWC2 1192 aa7.96□□□□□ -1.13
SMC1A-201ENST00000322213 ISM2Q6H9L7 571 aa7.96□□□□□ -1.13
SMC1A-201ENST00000322213 MADDQ8WXG6 1647 aa7.96□□□□□ -1.13
SMC1A-201ENST00000322213 SPTLC2O15270 562 aa7.96□□□□□ -1.13
SMC1A-201ENST00000322213 E2F4Q16254 413 aa7.96□□□□□ -1.13
SMC1A-201ENST00000322213 NEK1Q96PY6 1258 aa7.96□□□□□ -1.13
SMC1A-201ENST00000322213 LARP6Q9BRS8 491 aaKnown RBP7.96□□□□□ -1.13
SMC1A-201ENST00000322213 GADD45BO75293 160 aaPredicted RBP7.96□□□□□ -1.13
SMC1A-201ENST00000322213 TNNC1P63316 161 aa7.96□□□□□ -1.13
SMC1A-201ENST00000322213 UBXN1Q04323 297 aa7.96□□□□□ -1.13
SMC1A-201ENST00000322213 KARSQ15046 597 aaKnown RBP7.96□□□□□ -1.13
SMC1A-201ENST00000322213 KIAA0753Q2KHM9 967 aa7.96□□□□□ -1.13
SMC1A-201ENST00000322213 TSHZ3Q63HK5 1081 aa7.96□□□□□ -1.13
SMC1A-201ENST00000322213 CCDC97Q96F63 343 aaPredicted RBP7.96□□□□□ -1.13
SMC1A-201ENST00000322213 MRFAP1L1Q96HT8 127 aa7.96□□□□□ -1.13
SMC1A-201ENST00000322213 SYNRGQ9UMZ2 1314 aa7.96□□□□□ -1.13
SMC1A-201ENST00000322213 POLR3DP05423 398 aaPredicted RBP7.96□□□□□ -1.14
SMC1A-201ENST00000322213 MTIF2P46199 727 aaKnown RBP7.96□□□□□ -1.14
SMC1A-201ENST00000322213 JPH2Q9BR39 696 aaPredicted RBP7.96□□□□□ -1.14
SMC1A-201ENST00000322213 CXorf56Q9H5V9 222 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 DCTPP1Q9H773 170 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 ALDH3A1P30838 453 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 RUFY4Q6ZNE9 571 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 RNF10Q8N5U6 811 aaKnown RBP7.96□□□□□ -1.14
SMC1A-201ENST00000322213 SH3GL3Q99963 347 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 ECHDC1Q9NTX5 307 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 MORC2Q9Y6X9 1032 aaPredicted RBP7.96□□□□□ -1.14
SMC1A-201ENST00000322213 SOS1Q07889 1333 aaPredicted RBP7.96□□□□□ -1.14
SMC1A-201ENST00000322213 KIF24Q5T7B8 1368 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 RTEL1-TNFRSF6BF6WH68 1400 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 GNAT3A8MTJ3 354 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 NLRP5P59047 1200 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 MXRA7P84157 204 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 PDCD2Q16342 344 aaPredicted RBP7.96□□□□□ -1.14
SMC1A-201ENST00000322213 RPUSD2Q8IZ73 545 aaKnown RBP7.96□□□□□ -1.14
SMC1A-201ENST00000322213 ANKRD24Q8TF21 1146 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 NAP1L3Q99457 506 aaPredicted RBP7.96□□□□□ -1.14
SMC1A-201ENST00000322213 LLPHQ9BRT6 129 aaKnown RBP7.96□□□□□ -1.14
SMC1A-201ENST00000322213 FEZ2Q9UHY8 353 aaPredicted RBP7.96□□□□□ -1.14
SMC1A-201ENST00000322213 E7EVH7 732 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 PNMA6AP0CW24 399 aaPredicted RBP7.96□□□□□ -1.14
SMC1A-201ENST00000322213 IDEP14735 1019 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 AMPD3Q01432 767 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 MAP7Q14244 749 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 CFAP58Q5T655 872 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 TAOK1Q7L7X3 1001 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 SEPT14Q6ZU15 432 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 MICAL1Q8TDZ2 1067 aa7.96□□□□□ -1.14
SMC1A-201ENST00000322213 TRIM6Q9C030 488 aaPredicted RBP7.96□□□□□ -1.14
SMC1A-201ENST00000322213 TMEM132EQ6IEE7 984 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 UBLCP1Q8WVY7 318 aaPredicted RBP7.95□□□□□ -1.14
SMC1A-201ENST00000322213 PPP1R13BQ96KQ4 1090 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 RAB34Q9BZG1 259 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 DONSONQ9NYP3 566 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 RASSF2P50749 326 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 CARD6Q9BX69 1037 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 UTP11Q9Y3A2 253 aaKnown RBP7.95□□□□□ -1.14
SMC1A-201ENST00000322213 DBN1Q16643 649 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 CCDC122Q5T0U0 273 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 C8orf74Q6P047 294 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 JAKMIP2Q96AA8 810 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 EXOC1Q9NV70 894 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 UHRF1BP1LA0JNW5 1464 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 GUCY1B3Q02153 619 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 IFT81Q8WYA0 676 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 CDK19Q9BWU1 502 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 NBPF3Q9H094 633 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 MBIPQ9NS73 344 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 GNL3LQ9NVN8 582 aaKnown RBP7.95□□□□□ -1.14
SMC1A-201ENST00000322213 LIG3P49916 1009 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 IKBKGQ9Y6K9 419 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 A0A087WUV0 522 aaPredicted RBP7.95□□□□□ -1.14
SMC1A-201ENST00000322213 BRD1O95696 1058 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 POTEJP0CG39 1038 aa7.95□□□□□ -1.14
SMC1A-201ENST00000322213 KIF6Q6ZMV9 814 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms