RNA–Protein interactions for RNA: ENST00000320895.9

CLPTM1L-201, Transcript of CLPTM1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1L, Length 2,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-201ENST00000320895 CSF1RP07333 972 aa28.48■■■□□ 2.15
CLPTM1L-201ENST00000320895 TYRO3Q06418 890 aa28.48■■■□□ 2.15
CLPTM1L-201ENST00000320895 PTF1AQ7RTS3 328 aa28.48■■■□□ 2.15
CLPTM1L-201ENST00000320895 AKAP2Q9Y2D5 859 aa28.48■■■□□ 2.15
CLPTM1L-201ENST00000320895 MRVI1Q9Y6F6 885 aa28.48■■■□□ 2.15
CLPTM1L-201ENST00000320895 HMGB1P09429 215 aaKnown RBP28.48■■■□□ 2.15
CLPTM1L-201ENST00000320895 ELP1O95163 1332 aa28.48■■■□□ 2.15
CLPTM1L-201ENST00000320895 IRS4O14654 1257 aaPredicted RBP28.47■■■□□ 2.15
CLPTM1L-201ENST00000320895 CYP19A1P11511 503 aaPredicted RBP28.46■■■□□ 2.15
CLPTM1L-201ENST00000320895 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.46■■■□□ 2.15
CLPTM1L-201ENST00000320895 RIPOR2Q9Y4F9 1068 aa28.46■■■□□ 2.15
CLPTM1L-201ENST00000320895 ANO6Q4KMQ2 910 aa28.46■■■□□ 2.15
CLPTM1L-201ENST00000320895 LAMA4Q16363 1823 aa28.45■■■□□ 2.15
CLPTM1L-201ENST00000320895 IDH1O75874 414 aaKnown RBP28.45■■■□□ 2.14
CLPTM1L-201ENST00000320895 KCNQ4P56696 695 aa28.45■■■□□ 2.14
CLPTM1L-201ENST00000320895 TRIM28Q13263 835 aaKnown RBP28.45■■■□□ 2.14
CLPTM1L-201ENST00000320895 ERCC4Q92889 916 aaPredicted RBP28.45■■■□□ 2.14
CLPTM1L-201ENST00000320895 GPAA1O43292 621 aa28.44■■■□□ 2.14
CLPTM1L-201ENST00000320895 ADD1P35611 737 aaKnown RBP28.44■■■□□ 2.14
CLPTM1L-201ENST00000320895 USP28Q96RU2 1077 aa28.44■■■□□ 2.14
CLPTM1L-201ENST00000320895 CTSWP56202 376 aa28.44■■■□□ 2.14
CLPTM1L-201ENST00000320895 TEX13AQ9BXU3 409 aaPredicted RBP28.43■■■□□ 2.14
CLPTM1L-201ENST00000320895 FDPSP14324 419 aaKnown RBP28.43■■■□□ 2.14
CLPTM1L-201ENST00000320895 SLC9C2Q5TAH2 1124 aa28.43■■■□□ 2.14
CLPTM1L-201ENST00000320895 INCENPQ9NQS7 918 aa28.43■■■□□ 2.14
CLPTM1L-201ENST00000320895 RIC1Q4ADV7 1423 aa28.43■■■□□ 2.14
CLPTM1L-201ENST00000320895 PRC1O43663 620 aa28.42■■■□□ 2.14
CLPTM1L-201ENST00000320895 APPP05067 770 aa28.42■■■□□ 2.14
CLPTM1L-201ENST00000320895 RXRAP19793 462 aa28.42■■■□□ 2.14
CLPTM1L-201ENST00000320895 PHKA1P46020 1223 aa28.42■■■□□ 2.14
CLPTM1L-201ENST00000320895 IMMTQ16891 758 aaKnown RBP28.42■■■□□ 2.14
CLPTM1L-201ENST00000320895 FBXW7Q969H0 707 aa28.42■■■□□ 2.14
CLPTM1L-201ENST00000320895 PIH1D3Q9NQM4 214 aaKnown RBP28.42■■■□□ 2.14
CLPTM1L-201ENST00000320895 ANKRD18BA2A2Z9 1011 aa28.42■■■□□ 2.14
CLPTM1L-201ENST00000320895 UBN2Q6ZU65 1347 aa28.42■■■□□ 2.14
CLPTM1L-201ENST00000320895 DZIP3Q86Y13 1208 aaKnown RBP28.41■■■□□ 2.14
CLPTM1L-201ENST00000320895 AGXT2Q9BYV1 514 aa28.41■■■□□ 2.14
CLPTM1L-201ENST00000320895 DNAJC25Q9H1X3 360 aa28.41■■■□□ 2.14
CLPTM1L-201ENST00000320895 KLF18A0A0U1RQI7 1052 aa28.41■■■□□ 2.14
CLPTM1L-201ENST00000320895 ILDR1Q86SU0 546 aaPredicted RBP28.41■■■□□ 2.14
CLPTM1L-201ENST00000320895 VSIG10Q8N0Z9 540 aa28.41■■■□□ 2.14
CLPTM1L-201ENST00000320895 APPBP2Q92624 585 aa28.41■■■□□ 2.14
CLPTM1L-201ENST00000320895 KIAA2012Q0VF49 1180 aa28.4■■■□□ 2.14
CLPTM1L-201ENST00000320895 LLPHQ9BRT6 129 aaKnown RBP28.4■■■□□ 2.14
CLPTM1L-201ENST00000320895 GOLPH3LQ9H4A5 285 aa28.4■■■□□ 2.14
CLPTM1L-201ENST00000320895 CLSTN2Q9H4D0 955 aa28.4■■■□□ 2.14
CLPTM1L-201ENST00000320895 CBX8Q9HC52 389 aa28.4■■■□□ 2.14
CLPTM1L-201ENST00000320895 POLR3DP05423 398 aaPredicted RBP28.4■■■□□ 2.14
CLPTM1L-201ENST00000320895 ANTXR2P58335 489 aa28.4■■■□□ 2.14
CLPTM1L-201ENST00000320895 RBM10P98175 930 aaKnown RBP28.4■■■□□ 2.14
CLPTM1L-201ENST00000320895 PLA2G12BQ9BX93 195 aa28.4■■■□□ 2.14
CLPTM1L-201ENST00000320895 ZSCAN16Q9H4T2 348 aaPredicted RBP28.4■■■□□ 2.14
CLPTM1L-201ENST00000320895 PDIA4P13667 645 aaKnown RBP28.39■■■□□ 2.14
CLPTM1L-201ENST00000320895 DNTTIP2Q5QJE6 756 aaKnown RBP28.39■■■□□ 2.14
CLPTM1L-201ENST00000320895 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.39■■■□□ 2.14
CLPTM1L-201ENST00000320895 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.39■■■□□ 2.14
CLPTM1L-201ENST00000320895 ATP6V1AP38606 617 aa28.39■■■□□ 2.14
CLPTM1L-201ENST00000320895 FAM200AQ8TCP9 573 aa28.39■■■□□ 2.14
CLPTM1L-201ENST00000320895 GOLGA8BA8MQT2 603 aa28.38■■■□□ 2.13
CLPTM1L-201ENST00000320895 ZNF213O14771 459 aa28.38■■■□□ 2.13
CLPTM1L-201ENST00000320895 CCAR1Q8IX12 1150 aaKnown RBP28.38■■■□□ 2.13
CLPTM1L-201ENST00000320895 STK11IPQ8N1F8 1099 aa28.38■■■□□ 2.13
CLPTM1L-201ENST00000320895 CFAP45Q9UL16 551 aa28.38■■■□□ 2.13
CLPTM1L-201ENST00000320895 MCM5P33992 734 aa28.38■■■□□ 2.13
CLPTM1L-201ENST00000320895 GJD4Q96KN9 370 aaPredicted RBP28.38■■■□□ 2.13
CLPTM1L-201ENST00000320895 WWC3Q9ULE0 1092 aa28.38■■■□□ 2.13
CLPTM1L-201ENST00000320895 CARMIL3Q8ND23 1372 aa28.37■■■□□ 2.13
CLPTM1L-201ENST00000320895 HMGN5P82970 282 aaKnown RBP28.37■■■□□ 2.13
CLPTM1L-201ENST00000320895 CCDC144CPQ8IYA2 1237 aa28.37■■■□□ 2.13
CLPTM1L-201ENST00000320895 ZNF274Q96GC6 653 aaPredicted RBP28.37■■■□□ 2.13
CLPTM1L-201ENST00000320895 SEC31BQ9NQW1 1179 aa28.37■■■□□ 2.13
CLPTM1L-201ENST00000320895 DDX19AQ9NUU7 478 aaKnown RBP28.37■■■□□ 2.13
CLPTM1L-201ENST00000320895 SALL1Q9NSC2 1324 aa28.37■■■□□ 2.13
CLPTM1L-201ENST00000320895 CCDC102BQ68D86 513 aa28.36■■■□□ 2.13
CLPTM1L-201ENST00000320895 NBPF3Q9H094 633 aa28.36■■■□□ 2.13
CLPTM1L-201ENST00000320895 SENP2Q9HC62 589 aa28.36■■■□□ 2.13
CLPTM1L-201ENST00000320895 CTNNA3Q9UI47 895 aa28.36■■■□□ 2.13
CLPTM1L-201ENST00000320895 EP400Q96L91 3159 aa28.36■■■□□ 2.13
CLPTM1L-201ENST00000320895 ME1P48163 572 aa28.36■■■□□ 2.13
CLPTM1L-201ENST00000320895 RALYLQ86SE5 291 aaKnown RBP28.36■■■□□ 2.13
CLPTM1L-201ENST00000320895 PDE8BO95263 885 aa28.35■■■□□ 2.13
CLPTM1L-201ENST00000320895 NAA16Q6N069 864 aaPredicted RBP28.35■■■□□ 2.13
CLPTM1L-201ENST00000320895 SASS6Q6UVJ0 657 aa28.35■■■□□ 2.13
CLPTM1L-201ENST00000320895 MB21D2Q8IYB1 491 aaPredicted RBP28.35■■■□□ 2.13
CLPTM1L-201ENST00000320895 VGLL2Q8N8G2 317 aa28.35■■■□□ 2.13
CLPTM1L-201ENST00000320895 HPS5Q9UPZ3 1129 aa28.35■■■□□ 2.13
CLPTM1L-201ENST00000320895 ZFYP08048 801 aaPredicted RBP28.35■■■□□ 2.13
CLPTM1L-201ENST00000320895 ITPK1Q13572 414 aa28.35■■■□□ 2.13
CLPTM1L-201ENST00000320895 AIFM3Q96NN9 605 aa28.35■■■□□ 2.13
CLPTM1L-201ENST00000320895 KCNF1Q9H3M0 494 aa28.35■■■□□ 2.13
CLPTM1L-201ENST00000320895 ZNF532Q9HCE3 1301 aa28.35■■■□□ 2.13
CLPTM1L-201ENST00000320895 LOC102724428A0A0B4J2F2 783 aa28.34■■■□□ 2.13
CLPTM1L-201ENST00000320895 SIK1P57059 783 aa28.34■■■□□ 2.13
CLPTM1L-201ENST00000320895 TBC1D10CQ8IV04 446 aa28.34■■■□□ 2.13
CLPTM1L-201ENST00000320895 ADD2P35612 726 aa28.34■■■□□ 2.13
CLPTM1L-201ENST00000320895 PYCARDQ9ULZ3 195 aa28.34■■■□□ 2.13
CLPTM1L-201ENST00000320895 UQCRHLA0A096LP55 91 aa28.33■■■□□ 2.13
CLPTM1L-201ENST00000320895 UQCRHP07919 91 aa28.33■■■□□ 2.13
CLPTM1L-201ENST00000320895 LRRFIP1Q32MZ4 808 aaKnown RBP28.33■■■□□ 2.13
CLPTM1L-201ENST00000320895 SUSD4Q5VX71 490 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms