RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 LLGL1Q15334 1064 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 CEP85Q6P2H3 762 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 NLRP3Q96P20 1036 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 ORAI2Q96SN7 254 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 CARD14Q9BXL6 1004 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 CCDC175P0C221 793 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 MTERF4Q7Z6M4 381 aaKnown RBP10.04□□□□□ -0.8
SSBP2-201ENST00000320672 VPS36Q86VN1 386 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 BACH1O14867 736 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 JAK2O60674 1132 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 ATP8B2P98198 1209 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 DDB1Q16531 1140 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 KIAA0753Q2KHM9 967 aa10.03□□□□□ -0.8
SSBP2-201ENST00000320672 CCDC114Q96M63 670 aa10.03□□□□□ -0.8
SSBP2-201ENST00000320672 USTQ9Y2C2 406 aa10.03□□□□□ -0.8
SSBP2-201ENST00000320672 MAPKBP1O60336 1514 aa10.03□□□□□ -0.8
SSBP2-201ENST00000320672 HMGB1P09429 215 aaKnown RBP10.03□□□□□ -0.8
SSBP2-201ENST00000320672 UHMK1Q8TAS1 419 aaKnown RBP10.03□□□□□ -0.8
SSBP2-201ENST00000320672 MRPS27Q92552 414 aaKnown RBP10.03□□□□□ -0.8
SSBP2-201ENST00000320672 ALS2CR12Q96Q35 445 aa10.03□□□□□ -0.8
SSBP2-201ENST00000320672 RAB34Q9BZG1 259 aa10.03□□□□□ -0.8
SSBP2-201ENST00000320672 RTL1A6NKG5 1358 aa10.03□□□□□ -0.8
SSBP2-201ENST00000320672 FAM98CQ17RN3 349 aaKnown RBP10.03□□□□□ -0.8
SSBP2-201ENST00000320672 MICALL1Q8N3F8 863 aa10.03□□□□□ -0.8
SSBP2-201ENST00000320672 TYRO3Q06418 890 aa10.03□□□□□ -0.8
SSBP2-201ENST00000320672 EP400NLQ6ZTU2 488 aa10.03□□□□□ -0.8
SSBP2-201ENST00000320672 CCDC169A6NNP5 214 aa10.03□□□□□ -0.8
SSBP2-201ENST00000320672 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.03□□□□□ -0.8
SSBP2-201ENST00000320672 V9GY48 417 aaPredicted RBP10.03□□□□□ -0.8
SSBP2-201ENST00000320672 PLEKHH2Q8IVE3 1493 aa10.03□□□□□ -0.8
SSBP2-201ENST00000320672 CAPN12Q6ZSI9 719 aa10.02□□□□□ -0.8
SSBP2-201ENST00000320672 SPTLC2O15270 562 aa10.02□□□□□ -0.8
SSBP2-201ENST00000320672 HPDP32754 393 aaPredicted RBP10.02□□□□□ -0.8
SSBP2-201ENST00000320672 KIF5BP33176 963 aa10.02□□□□□ -0.8
SSBP2-201ENST00000320672 PSMC4P43686 418 aa10.02□□□□□ -0.8
SSBP2-201ENST00000320672 BMP2KLQ5H9B9 411 aa10.02□□□□□ -0.8
SSBP2-201ENST00000320672 HSF2BPO75031 334 aa10.02□□□□□ -0.81
SSBP2-201ENST00000320672 CCDC65Q8IXS2 484 aa10.02□□□□□ -0.81
SSBP2-201ENST00000320672 ADAT2Q7Z6V5 191 aaKnown RBP10.02□□□□□ -0.81
SSBP2-201ENST00000320672 CD109Q6YHK3 1445 aa10.02□□□□□ -0.81
SSBP2-201ENST00000320672 FSD2A1L4K1 749 aa10.02□□□□□ -0.81
SSBP2-201ENST00000320672 PIK3R4Q99570 1358 aa10.02□□□□□ -0.81
SSBP2-201ENST00000320672 FAM13AO94988 1023 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 GOLGA8HP0CJ92 632 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 NCAPH2Q6IBW4 605 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 MAPKAPK5Q8IW41 473 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 FBF1Q8TES7 1133 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 ZC3H12CQ9C0D7 883 aaKnown RBP10.01□□□□□ -0.81
SSBP2-201ENST00000320672 PNMA6EA0A0J9YXQ4 647 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 VAMP4O75379 141 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 FOXD4Q12950 439 aaPredicted RBP10.01□□□□□ -0.81
SSBP2-201ENST00000320672 CEP57Q86XR8 500 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 TROQ12816 1431 aaPredicted RBP10.01□□□□□ -0.81
SSBP2-201ENST00000320672 PPP1R12AO14974 1030 aaPredicted RBP10.01□□□□□ -0.81
SSBP2-201ENST00000320672 ESR2Q92731 530 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 ANO3Q9BYT9 981 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 RRAGDQ9NQL2 400 aaPredicted RBP10.01□□□□□ -0.81
SSBP2-201ENST00000320672 UFL1O94874 794 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 AMPD3Q01432 767 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 DOK7Q18PE1 504 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 KSR2Q6VAB6 950 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 PTPRCP08575 1304 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 RNF113AO15541 343 aaKnown RBP10.01□□□□□ -0.81
SSBP2-201ENST00000320672 IFRD2Q12894 506 aaPredicted RBP10.01□□□□□ -0.81
SSBP2-201ENST00000320672 PLEKHM2Q8IWE5 1019 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 TTLL3Q9Y4R7 772 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 GCOM1H8Y6P7 765 aaPredicted RBP10.01□□□□□ -0.81
SSBP2-201ENST00000320672 LDHCP07864 332 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 MYZAPP0CAP1 466 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 C10orf67Q8IYJ2 551 aa10.01□□□□□ -0.81
SSBP2-201ENST00000320672 UBLCP1Q8WVY7 318 aaPredicted RBP10.01□□□□□ -0.81
SSBP2-201ENST00000320672 RRP9O43818 475 aaKnown RBP10□□□□□ -0.81
SSBP2-201ENST00000320672 PHLDB2Q86SQ0 1253 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 ANKRD44Q8N8A2 993 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 STAC3Q96MF2 364 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 GRIN2BQ13224 1484 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 MNAT1P51948 309 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 UBXN2AP68543 259 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 MARCH10Q8NA82 808 aaPredicted RBP10□□□□□ -0.81
SSBP2-201ENST00000320672 MAGED2Q9UNF1 606 aaPredicted RBP10□□□□□ -0.81
SSBP2-201ENST00000320672 ITGA6P23229 1130 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 NAA25Q14CX7 972 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 GTPBP4Q9BZE4 634 aaKnown RBP10□□□□□ -0.81
SSBP2-201ENST00000320672 FRMPD2Q68DX3 1309 aaPredicted RBP10□□□□□ -0.81
SSBP2-201ENST00000320672 CTAGE15A4D2H0 777 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 CTAGE8P0CG41 777 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 MKRN3Q13064 507 aaKnown RBP10□□□□□ -0.81
SSBP2-201ENST00000320672 CTAGE6Q86UF2 777 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 CTAGE4Q8IX94 777 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 MSH6P52701 1360 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 A0A1B0GUL7 405 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 KLHL7Q8IXQ5 586 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 SUCLG2Q96I99 432 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 TAB2Q9NYJ8 693 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 MYO1AQ9UBC5 1043 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 NBPF7P0C2Y1 421 aaPredicted RBP10□□□□□ -0.81
SSBP2-201ENST00000320672 PSMD6Q15008 389 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 TOP2BQ02880 1626 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 PLEKHH1Q9ULM0 1364 aa10□□□□□ -0.81
SSBP2-201ENST00000320672 CCDC6Q16204 474 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms