RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 LDHDQ86WU2 507 aa11.83□□□□□ -0.52
KARS-202ENST00000319410 RTFDC1Q9BY42 306 aaPredicted RBP11.83□□□□□ -0.52
KARS-202ENST00000319410 CXCL9Q07325 125 aa11.82□□□□□ -0.52
KARS-202ENST00000319410 CEP83Q9Y592 693 aa11.82□□□□□ -0.52
KARS-202ENST00000319410 C6orf229H3BNL8 230 aa11.82□□□□□ -0.52
KARS-202ENST00000319410 PDE8AO60658 829 aa11.82□□□□□ -0.52
KARS-202ENST00000319410 MFAP1P55081 439 aaKnown RBP11.82□□□□□ -0.52
KARS-202ENST00000319410 CASP7P55210 303 aa11.82□□□□□ -0.52
KARS-202ENST00000319410 KIAA2012Q0VF49 1180 aa11.82□□□□□ -0.52
KARS-202ENST00000319410 SUPT20HQ8NEM7 779 aa11.82□□□□□ -0.52
KARS-202ENST00000319410 PRIMPOLQ96LW4 560 aa11.82□□□□□ -0.52
KARS-202ENST00000319410 POLLQ9UGP5 575 aa11.82□□□□□ -0.52
KARS-202ENST00000319410 ZNRF3Q9ULT6 936 aa11.82□□□□□ -0.52
KARS-202ENST00000319410 YDJCA8MPS7 323 aa11.81□□□□□ -0.52
KARS-202ENST00000319410 GRM8O00222 908 aa11.81□□□□□ -0.52
KARS-202ENST00000319410 LMOD1P29536 600 aaPredicted RBP11.81□□□□□ -0.52
KARS-202ENST00000319410 RPS8P62241 208 aaKnown RBP11.81□□□□□ -0.52
KARS-202ENST00000319410 SATB1Q01826 763 aa11.81□□□□□ -0.52
KARS-202ENST00000319410 FMR1Q06787 632 aaKnown RBP eCLIP11.81□□□□□ -0.52
KARS-202ENST00000319410 SLC4A10Q6U841 1118 aa11.81□□□□□ -0.52
KARS-202ENST00000319410 DBNDD1Q9H9R9 158 aa11.81□□□□□ -0.52
KARS-202ENST00000319410 LRRC37AA6NMS7 1700 aa11.81□□□□□ -0.52
KARS-202ENST00000319410 TRIM27P14373 513 aa11.81□□□□□ -0.52
KARS-202ENST00000319410 GTF2F1P35269 517 aaKnown RBP eCLIP11.81□□□□□ -0.52
KARS-202ENST00000319410 MKRN1Q9UHC7 482 aaKnown RBP11.81□□□□□ -0.52
KARS-202ENST00000319410 SHTN1A0MZ66 631 aa11.8□□□□□ -0.52
KARS-202ENST00000319410 ITGBL1O95965 494 aaPredicted RBP11.8□□□□□ -0.52
KARS-202ENST00000319410 PRR29P0C7W0 189 aa11.8□□□□□ -0.52
KARS-202ENST00000319410 CAPN2P17655 700 aa11.8□□□□□ -0.52
KARS-202ENST00000319410 GMPSP49915 693 aaPredicted RBP11.8□□□□□ -0.52
KARS-202ENST00000319410 DOK7Q18PE1 504 aa11.8□□□□□ -0.52
KARS-202ENST00000319410 WASHC4Q2M389 1173 aa11.8□□□□□ -0.52
KARS-202ENST00000319410 UBE3BQ7Z3V4 1068 aa11.8□□□□□ -0.52
KARS-202ENST00000319410 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.8□□□□□ -0.52
KARS-202ENST00000319410 KCNQ5Q9NR82 932 aa11.8□□□□□ -0.52
KARS-202ENST00000319410 WTIPA6NIX2 430 aaPredicted RBP11.8□□□□□ -0.52
KARS-202ENST00000319410 OS9Q13438 667 aaPredicted RBP11.8□□□□□ -0.52
KARS-202ENST00000319410 SKOR2Q2VWA4 1001 aaPredicted RBP11.8□□□□□ -0.52
KARS-202ENST00000319410 CCDC152Q4G0S7 254 aa11.8□□□□□ -0.52
KARS-202ENST00000319410 PNMA8AQ86V59 439 aaPredicted RBP11.8□□□□□ -0.52
KARS-202ENST00000319410 CNTROBQ8N137 903 aa11.8□□□□□ -0.52
KARS-202ENST00000319410 ADAMTSL1Q8N6G6 1762 aa11.8□□□□□ -0.52
KARS-202ENST00000319410 RTL9Q8NET4 1388 aa11.8□□□□□ -0.52
KARS-202ENST00000319410 C9orf78Q9NZ63 289 aaPredicted RBP11.8□□□□□ -0.52
KARS-202ENST00000319410 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
KARS-202ENST00000319410 NASPP49321 788 aaPredicted RBP11.79□□□□□ -0.52
KARS-202ENST00000319410 CIAPIN1Q6FI81 312 aa11.79□□□□□ -0.52
KARS-202ENST00000319410 TMC4Q7Z404 712 aa11.79□□□□□ -0.52
KARS-202ENST00000319410 NCAPGQ9BPX3 1015 aa11.79□□□□□ -0.52
KARS-202ENST00000319410 ANKIB1Q9P2G1 1089 aa11.79□□□□□ -0.52
KARS-202ENST00000319410 PASKQ96RG2 1323 aa11.79□□□□□ -0.52
KARS-202ENST00000319410 RBM25P49756 843 aaKnown RBP11.79□□□□□ -0.52
KARS-202ENST00000319410 CTSWP56202 376 aa11.79□□□□□ -0.52
KARS-202ENST00000319410 DZIP1LQ8IYY4 767 aaKnown RBP11.79□□□□□ -0.52
KARS-202ENST00000319410 TBC1D16Q8TBP0 767 aa11.79□□□□□ -0.52
KARS-202ENST00000319410 GREM2Q9H772 168 aa11.79□□□□□ -0.52
KARS-202ENST00000319410 UPF2Q9HAU5 1272 aaKnown RBP11.79□□□□□ -0.52
KARS-202ENST00000319410 GPRC5DQ9NZD1 345 aa11.79□□□□□ -0.52
KARS-202ENST00000319410 OGFRQ9NZT2 677 aa11.79□□□□□ -0.52
KARS-202ENST00000319410 IGSF3O75054 1194 aa11.78□□□□□ -0.52
KARS-202ENST00000319410 CSF1RP07333 972 aa11.78□□□□□ -0.52
KARS-202ENST00000319410 CCDC172P0C7W6 258 aa11.78□□□□□ -0.52
KARS-202ENST00000319410 GTF2A1P52655 376 aaPredicted RBP11.78□□□□□ -0.52
KARS-202ENST00000319410 USP44Q9H0E7 712 aa11.78□□□□□ -0.52
KARS-202ENST00000319410 VPS33BQ9H267 617 aa11.78□□□□□ -0.52
KARS-202ENST00000319410 UFL1O94874 794 aa11.78□□□□□ -0.52
KARS-202ENST00000319410 PDE3AQ14432 1141 aa11.78□□□□□ -0.52
KARS-202ENST00000319410 TTLL11Q8NHH1 800 aa11.78□□□□□ -0.52
KARS-202ENST00000319410 ZBTB9Q96C00 473 aa11.78□□□□□ -0.52
KARS-202ENST00000319410 CREBZFQ9NS37 354 aa11.78□□□□□ -0.52
KARS-202ENST00000319410 SH3BP1Q9Y3L3 701 aa11.78□□□□□ -0.52
KARS-202ENST00000319410 SPEF2Q9C093 1822 aa11.77□□□□□ -0.52
KARS-202ENST00000319410 TRAF5O00463 557 aa11.77□□□□□ -0.52
KARS-202ENST00000319410 ANKRD18AQ8IVF6 992 aa11.77□□□□□ -0.52
KARS-202ENST00000319410 PDCL2Q8N4E4 241 aa11.77□□□□□ -0.52
KARS-202ENST00000319410 JMYQ8N9B5 988 aa11.77□□□□□ -0.52
KARS-202ENST00000319410 RAI14Q9P0K7 980 aa11.77□□□□□ -0.52
KARS-202ENST00000319410 ZKSCAN5Q9Y2L8 839 aa11.77□□□□□ -0.52
KARS-202ENST00000319410 PSMD14O00487 310 aa11.77□□□□□ -0.53
KARS-202ENST00000319410 ECE2O60344 883 aa11.77□□□□□ -0.53
KARS-202ENST00000319410 GNAI3P08754 354 aa11.77□□□□□ -0.53
KARS-202ENST00000319410 CENPQQ7L2Z9 268 aaPredicted RBP11.77□□□□□ -0.53
KARS-202ENST00000319410 ZNF710Q8N1W2 664 aa11.77□□□□□ -0.53
KARS-202ENST00000319410 FOXO4P98177 505 aa11.76□□□□□ -0.53
KARS-202ENST00000319410 TRPM4Q8TD43 1214 aa11.76□□□□□ -0.53
KARS-202ENST00000319410 BRMS1Q9HCU9 246 aa11.76□□□□□ -0.53
KARS-202ENST00000319410 CHMP5Q9NZZ3 219 aa11.76□□□□□ -0.53
KARS-202ENST00000319410 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
KARS-202ENST00000319410 TMEM88BA6NKF7 163 aa11.76□□□□□ -0.53
KARS-202ENST00000319410 GOLIM4O00461 696 aa11.76□□□□□ -0.53
KARS-202ENST00000319410 MAP2K1Q02750 393 aaPredicted RBP11.76□□□□□ -0.53
KARS-202ENST00000319410 TNIP1Q15025 636 aa11.76□□□□□ -0.53
KARS-202ENST00000319410 RABL6Q3YEC7 729 aaPredicted RBP11.76□□□□□ -0.53
KARS-202ENST00000319410 NBPF11Q86T75 865 aa11.76□□□□□ -0.53
KARS-202ENST00000319410 ZC3H12CQ9C0D7 883 aaKnown RBP11.76□□□□□ -0.53
KARS-202ENST00000319410 ADARB2Q9NS39 739 aaKnown RBP11.76□□□□□ -0.53
KARS-202ENST00000319410 GGA1Q9UJY5 639 aa11.76□□□□□ -0.53
KARS-202ENST00000319410 MYH3P11055 1940 aa11.75□□□□□ -0.53
KARS-202ENST00000319410 SPDYE4A6NLX3 237 aa11.75□□□□□ -0.53
KARS-202ENST00000319410 EGFRP00533 1210 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms