RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 ZKSCAN1P17029 563 aaPredicted RBP8.58□□□□□ -1.04
NPHP1-201ENST00000316534 CASTP20810 708 aaKnown RBP8.58□□□□□ -1.04
NPHP1-201ENST00000316534 ME3Q16798 604 aa8.58□□□□□ -1.04
NPHP1-201ENST00000316534 MB21D2Q8IYB1 491 aaPredicted RBP8.58□□□□□ -1.04
NPHP1-201ENST00000316534 PUS7LQ9H0K6 701 aaKnown RBP8.58□□□□□ -1.04
NPHP1-201ENST00000316534 CNNM1Q9NRU3 951 aa8.58□□□□□ -1.04
NPHP1-201ENST00000316534 SRP68Q9UHB9 627 aaKnown RBP8.58□□□□□ -1.04
NPHP1-201ENST00000316534 NDUFB9Q9Y6M9 179 aa8.58□□□□□ -1.04
NPHP1-201ENST00000316534 SIPA1L1O43166 1804 aa8.58□□□□□ -1.04
NPHP1-201ENST00000316534 GNPATO15228 680 aa8.58□□□□□ -1.04
NPHP1-201ENST00000316534 NEUROD6Q96NK8 337 aa8.58□□□□□ -1.04
NPHP1-201ENST00000316534 DNAJC2Q99543 621 aaKnown RBP8.58□□□□□ -1.04
NPHP1-201ENST00000316534 KAT6BQ8WYB5 2073 aa8.57□□□□□ -1.04
NPHP1-201ENST00000316534 IGHMBP2P38935 993 aaKnown RBP8.57□□□□□ -1.04
NPHP1-201ENST00000316534 NFIXQ14938 502 aa8.57□□□□□ -1.04
NPHP1-201ENST00000316534 TRAPPC3LQ5T215 181 aa8.57□□□□□ -1.04
NPHP1-201ENST00000316534 CCDC129Q6ZRS4 1044 aa8.57□□□□□ -1.04
NPHP1-201ENST00000316534 JAKMIP1Q96N16 626 aaKnown RBP8.57□□□□□ -1.04
NPHP1-201ENST00000316534 LLPHQ9BRT6 129 aaKnown RBP8.57□□□□□ -1.04
NPHP1-201ENST00000316534 ANKRD2Q9GZV1 360 aa8.57□□□□□ -1.04
NPHP1-201ENST00000316534 LMBRD1Q9NUN5 540 aa8.57□□□□□ -1.04
NPHP1-201ENST00000316534 POLRMTO00411 1230 aaKnown RBP8.57□□□□□ -1.04
NPHP1-201ENST00000316534 PFKFB2O60825 505 aa8.57□□□□□ -1.04
NPHP1-201ENST00000316534 NT5C2P49902 561 aa8.57□□□□□ -1.04
NPHP1-201ENST00000316534 PKP1Q13835 747 aa8.57□□□□□ -1.04
NPHP1-201ENST00000316534 MEX3CQ5U5Q3 659 aaKnown RBP8.57□□□□□ -1.04
NPHP1-201ENST00000316534 NEK1Q96PY6 1258 aa8.57□□□□□ -1.04
NPHP1-201ENST00000316534 STRBPQ96SI9 672 aaKnown RBP8.57□□□□□ -1.04
NPHP1-201ENST00000316534 MYH2Q9UKX2 1941 aa8.57□□□□□ -1.04
NPHP1-201ENST00000316534 PDE6AP16499 860 aa8.57□□□□□ -1.04
NPHP1-201ENST00000316534 SKOR2Q2VWA4 1001 aaPredicted RBP8.57□□□□□ -1.04
NPHP1-201ENST00000316534 ZNF384Q8TF68 577 aa8.57□□□□□ -1.04
NPHP1-201ENST00000316534 ZNF274Q96GC6 653 aaPredicted RBP8.57□□□□□ -1.04
NPHP1-201ENST00000316534 SETDB2Q96T68 719 aa8.57□□□□□ -1.04
NPHP1-201ENST00000316534 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.57□□□□□ -1.04
NPHP1-201ENST00000316534 ROBO3Q96MS0 1386 aa8.56□□□□□ -1.04
NPHP1-201ENST00000316534 E7EWF7 191 aa8.56□□□□□ -1.04
NPHP1-201ENST00000316534 TPTE2Q6XPS3 522 aa8.56□□□□□ -1.04
NPHP1-201ENST00000316534 ANKRD18AQ8IVF6 992 aa8.56□□□□□ -1.04
NPHP1-201ENST00000316534 CELF1Q92879 486 aaKnown RBP8.56□□□□□ -1.04
NPHP1-201ENST00000316534 GTF3C6Q969F1 213 aa8.56□□□□□ -1.04
NPHP1-201ENST00000316534 FAM84BQ96KN1 310 aaPredicted RBP8.56□□□□□ -1.04
NPHP1-201ENST00000316534 GBP4Q96PP9 640 aa8.56□□□□□ -1.04
NPHP1-201ENST00000316534 UPF3BQ9BZI7 483 aaKnown RBP8.56□□□□□ -1.04
NPHP1-201ENST00000316534 RGS17Q9UGC6 210 aaPredicted RBP8.56□□□□□ -1.04
NPHP1-201ENST00000316534 ISY1Q9ULR0 285 aaKnown RBP8.56□□□□□ -1.04
NPHP1-201ENST00000316534 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.56□□□□□ -1.04
NPHP1-201ENST00000316534 BAZ2AQ9UIF9 1905 aaKnown RBP8.56□□□□□ -1.04
NPHP1-201ENST00000316534 GRAPQ13588 217 aa8.56□□□□□ -1.04
NPHP1-201ENST00000316534 TAF7LQ5H9L4 462 aa8.56□□□□□ -1.04
NPHP1-201ENST00000316534 PRR5LQ6MZQ0 368 aa8.56□□□□□ -1.04
NPHP1-201ENST00000316534 DHX32Q7L7V1 743 aaKnown RBP8.56□□□□□ -1.04
NPHP1-201ENST00000316534 GRAPLQ8TC17 118 aaPredicted RBP8.56□□□□□ -1.04
NPHP1-201ENST00000316534 CTNNA3Q9UI47 895 aa8.56□□□□□ -1.04
NPHP1-201ENST00000316534 GIMAP6Q6P9H5 292 aa8.56□□□□□ -1.04
NPHP1-201ENST00000316534 BLOC1S2Q6QNY1 142 aa8.56□□□□□ -1.04
NPHP1-201ENST00000316534 CRAMP1Q96RY5 1269 aa8.56□□□□□ -1.04
NPHP1-201ENST00000316534 ZPR1O75312 459 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 GSE1Q14687 1217 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 KLHL40Q2TBA0 621 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 SLFNL1Q499Z3 407 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 PI16Q6UXB8 463 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 RIOK1Q9BRS2 568 aaKnown RBP8.55□□□□□ -1.04
NPHP1-201ENST00000316534 EP400Q96L91 3159 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 GPAA1O43292 621 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 FGAP02671 866 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 GNAT2P19087 354 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 ANTXR2P58335 489 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 TMC4Q7Z404 712 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 EPB41L4AQ9HCS5 686 aaPredicted RBP8.55□□□□□ -1.04
NPHP1-201ENST00000316534 WWC3Q9ULE0 1092 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 LEMD3Q9Y2U8 911 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 ZNF330Q9Y3S2 320 aaPredicted RBP8.55□□□□□ -1.04
NPHP1-201ENST00000316534 PATL2C9JE40 543 aaKnown RBP8.55□□□□□ -1.04
NPHP1-201ENST00000316534 RCAN1P53805 252 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 RPS8P62241 208 aaKnown RBP8.55□□□□□ -1.04
NPHP1-201ENST00000316534 DDR1Q08345 913 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 NLRP3Q96P20 1036 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 MPHOSPH8Q99549 860 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 TACC3Q9Y6A5 838 aa8.55□□□□□ -1.04
NPHP1-201ENST00000316534 ADAMTSL1Q8N6G6 1762 aa8.54□□□□□ -1.04
NPHP1-201ENST00000316534 WDR33Q9C0J8 1336 aaKnown RBP8.54□□□□□ -1.04
NPHP1-201ENST00000316534 ZNF532Q9HCE3 1301 aa8.54□□□□□ -1.04
NPHP1-201ENST00000316534 A0A0G2JLW4 131 aa8.54□□□□□ -1.04
NPHP1-201ENST00000316534 DENND2AQ9ULE3 1009 aa8.54□□□□□ -1.04
NPHP1-201ENST00000316534 MTMR6Q9Y217 621 aa8.54□□□□□ -1.04
NPHP1-201ENST00000316534 IL1R1P14778 569 aa8.54□□□□□ -1.04
NPHP1-201ENST00000316534 KCNQ4P56696 695 aa8.54□□□□□ -1.04
NPHP1-201ENST00000316534 TXNRD1Q16881 649 aa8.54□□□□□ -1.04
NPHP1-201ENST00000316534 MYH1P12882 1939 aa8.54□□□□□ -1.04
NPHP1-201ENST00000316534 GSG1L2A8MUP6 293 aa8.53□□□□□ -1.04
NPHP1-201ENST00000316534 CTDNEP1O95476 244 aa8.53□□□□□ -1.04
NPHP1-201ENST00000316534 CPA1P15085 419 aa8.53□□□□□ -1.04
NPHP1-201ENST00000316534 NBR1Q14596 966 aa8.53□□□□□ -1.04
NPHP1-201ENST00000316534 STAG1Q8WVM7 1258 aa8.53□□□□□ -1.04
NPHP1-201ENST00000316534 MKRN1Q9UHC7 482 aaKnown RBP8.53□□□□□ -1.04
NPHP1-201ENST00000316534 ZSCAN22P10073 491 aaPredicted RBP8.53□□□□□ -1.04
NPHP1-201ENST00000316534 ZNF827Q17R98 1081 aa8.53□□□□□ -1.04
NPHP1-201ENST00000316534 SGMS1Q86VZ5 419 aa8.53□□□□□ -1.04
NPHP1-201ENST00000316534 TDRD7Q8NHU6 1098 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms