RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 RNF181Q9P0P0 153 aa15.47■□□□□ 0.07
CHMP2A-201ENST00000312547 HMG20BQ9P0W2 317 aa15.47■□□□□ 0.07
CHMP2A-201ENST00000312547 AOX1Q06278 1338 aa15.46■□□□□ 0.07
CHMP2A-201ENST00000312547 G3V3G9 751 aa15.46■□□□□ 0.07
CHMP2A-201ENST00000312547 DCAF8Q5TAQ9 597 aa15.46■□□□□ 0.07
CHMP2A-201ENST00000312547 TSHZ3Q63HK5 1081 aa15.46■□□□□ 0.07
CHMP2A-201ENST00000312547 SKAP1Q86WV1 359 aa15.46■□□□□ 0.07
CHMP2A-201ENST00000312547 DENND2AQ9ULE3 1009 aa15.46■□□□□ 0.07
CHMP2A-201ENST00000312547 IQSEC3Q9UPP2 1182 aaPredicted RBP15.46■□□□□ 0.07
CHMP2A-201ENST00000312547 CXCL9Q07325 125 aa15.45■□□□□ 0.06
CHMP2A-201ENST00000312547 STRIP1Q5VSL9 837 aa15.45■□□□□ 0.06
CHMP2A-201ENST00000312547 PI16Q6UXB8 463 aa15.45■□□□□ 0.06
CHMP2A-201ENST00000312547 SPATA5Q8NB90 893 aa15.45■□□□□ 0.06
CHMP2A-201ENST00000312547 HAUS7Q99871 368 aa15.45■□□□□ 0.06
CHMP2A-201ENST00000312547 ZC3H4Q9UPT8 1303 aaKnown RBP15.44■□□□□ 0.06
CHMP2A-201ENST00000312547 USP17L3A6NCW0 530 aa15.44■□□□□ 0.06
CHMP2A-201ENST00000312547 USP17L4A6NCW7 530 aa15.44■□□□□ 0.06
CHMP2A-201ENST00000312547 ERC2O15083 957 aa15.44■□□□□ 0.06
CHMP2A-201ENST00000312547 RAD17O75943 681 aa15.44■□□□□ 0.06
CHMP2A-201ENST00000312547 GLRX3O76003 335 aaKnown RBP15.44■□□□□ 0.06
CHMP2A-201ENST00000312547 GTF2IP78347 998 aa15.44■□□□□ 0.06
CHMP2A-201ENST00000312547 DACT2Q5SW24 774 aa15.44■□□□□ 0.06
CHMP2A-201ENST00000312547 USP17L1Q7RTZ2 530 aa15.44■□□□□ 0.06
CHMP2A-201ENST00000312547 BOLA2Q9H3K6 86 aa15.44■□□□□ 0.06
CHMP2A-201ENST00000312547 SBF1O95248 1867 aa15.44■□□□□ 0.06
CHMP2A-201ENST00000312547 SALL1Q9NSC2 1324 aa15.43■□□□□ 0.06
CHMP2A-201ENST00000312547 FRAT2O75474 233 aaPredicted RBP15.43■□□□□ 0.06
CHMP2A-201ENST00000312547 VIL1P09327 827 aaKnown RBP15.43■□□□□ 0.06
CHMP2A-201ENST00000312547 ZAP70P43403 619 aa15.43■□□□□ 0.06
CHMP2A-201ENST00000312547 FKBP1AP62942 108 aaKnown RBP15.43■□□□□ 0.06
CHMP2A-201ENST00000312547 CHAF1AQ13111 956 aaPredicted RBP15.43■□□□□ 0.06
CHMP2A-201ENST00000312547 TTLL5Q6EMB2 1281 aa15.43■□□□□ 0.06
CHMP2A-201ENST00000312547 CIAPIN1Q6FI81 312 aa15.43■□□□□ 0.06
CHMP2A-201ENST00000312547 WDR66Q8TBY9 1149 aa15.43■□□□□ 0.06
CHMP2A-201ENST00000312547 SNRKQ9NRH2 765 aa15.43■□□□□ 0.06
CHMP2A-201ENST00000312547 ZNF541Q9H0D2 1346 aa15.43■□□□□ 0.06
CHMP2A-201ENST00000312547 PSMD14O00487 310 aa15.42■□□□□ 0.06
CHMP2A-201ENST00000312547 CYP2E1P05181 493 aaPredicted RBP15.42■□□□□ 0.06
CHMP2A-201ENST00000312547 EIF6P56537 245 aaKnown RBP15.42■□□□□ 0.06
CHMP2A-201ENST00000312547 CERS5Q8N5B7 392 aa15.42■□□□□ 0.06
CHMP2A-201ENST00000312547 JAG2Q9Y219 1238 aa15.42■□□□□ 0.06
CHMP2A-201ENST00000312547 NDUFB9Q9Y6M9 179 aa15.42■□□□□ 0.06
CHMP2A-201ENST00000312547 SCN9AQ15858 1988 aa15.42■□□□□ 0.06
CHMP2A-201ENST00000312547 TNIP1Q15025 636 aa15.41■□□□□ 0.06
CHMP2A-201ENST00000312547 RSBN1LQ6PCB5 846 aaPredicted RBP15.41■□□□□ 0.06
CHMP2A-201ENST00000312547 TBC1D22AQ8WUA7 517 aa15.41■□□□□ 0.06
CHMP2A-201ENST00000312547 GMLQ99445 158 aa15.41■□□□□ 0.06
CHMP2A-201ENST00000312547 MXD3Q9BW11 206 aa15.41■□□□□ 0.06
CHMP2A-201ENST00000312547 DICER1Q9UPY3 1922 aaKnown RBP15.41■□□□□ 0.06
CHMP2A-201ENST00000312547 MFSD14BQ5SR56 506 aa15.4■□□□□ 0.06
CHMP2A-201ENST00000312547 TTC22Q5TAA0 569 aa15.4■□□□□ 0.06
CHMP2A-201ENST00000312547 EDC3Q96F86 508 aaKnown RBP15.4■□□□□ 0.06
CHMP2A-201ENST00000312547 DNAJC2Q99543 621 aaKnown RBP15.4■□□□□ 0.06
CHMP2A-201ENST00000312547 ANTXR1Q9H6X2 564 aa15.4■□□□□ 0.06
CHMP2A-201ENST00000312547 PIH1D3Q9NQM4 214 aaKnown RBP15.4■□□□□ 0.06
CHMP2A-201ENST00000312547 SUGT1Q9Y2Z0 365 aa15.4■□□□□ 0.06
CHMP2A-201ENST00000312547 ZNF646O15015 1829 aaPredicted RBP15.4■□□□□ 0.06
CHMP2A-201ENST00000312547 AKAP11Q9UKA4 1901 aa15.39■□□□□ 0.05
CHMP2A-201ENST00000312547 GOLIM4O00461 696 aa15.39■□□□□ 0.05
CHMP2A-201ENST00000312547 IGSF3O75054 1194 aa15.39■□□□□ 0.05
CHMP2A-201ENST00000312547 GSPT1P15170 499 aaKnown RBP15.39■□□□□ 0.05
CHMP2A-201ENST00000312547 RGS3P49796 1198 aa15.39■□□□□ 0.05
CHMP2A-201ENST00000312547 GRIK5Q16478 980 aa15.39■□□□□ 0.05
CHMP2A-201ENST00000312547 TBC1D9Q6ZT07 1266 aa15.39■□□□□ 0.05
CHMP2A-201ENST00000312547 GPC2Q8N158 579 aa15.39■□□□□ 0.05
CHMP2A-201ENST00000312547 ZGPATQ8N5A5 531 aaKnown RBP15.39■□□□□ 0.05
CHMP2A-201ENST00000312547 PAG1Q9NWQ8 432 aa15.39■□□□□ 0.05
CHMP2A-201ENST00000312547 TIAM2Q8IVF5 1701 aa15.39■□□□□ 0.05
CHMP2A-201ENST00000312547 MYO3BQ8WXR4 1341 aa15.39■□□□□ 0.05
CHMP2A-201ENST00000312547 CCDC88AQ3V6T2 1871 aa15.38■□□□□ 0.05
CHMP2A-201ENST00000312547 RPS12P25398 132 aaKnown RBP15.38■□□□□ 0.05
CHMP2A-201ENST00000312547 TTF1Q15361 905 aaPredicted RBP15.38■□□□□ 0.05
CHMP2A-201ENST00000312547 AGBL3Q8NEM8 1001 aa15.38■□□□□ 0.05
CHMP2A-201ENST00000312547 FBXW7Q969H0 707 aa15.38■□□□□ 0.05
CHMP2A-201ENST00000312547 ZBTB12Q9Y330 459 aaPredicted RBP15.38■□□□□ 0.05
CHMP2A-201ENST00000312547 GLTPD2A6NH11 291 aa15.37■□□□□ 0.05
CHMP2A-201ENST00000312547 PRDX5P30044 214 aa15.37■□□□□ 0.05
CHMP2A-201ENST00000312547 KBTBD3Q8NAB2 608 aa15.37■□□□□ 0.05
CHMP2A-201ENST00000312547 DPF2Q92785 391 aa15.37■□□□□ 0.05
CHMP2A-201ENST00000312547 GJA3Q9Y6H8 435 aa15.37■□□□□ 0.05
CHMP2A-201ENST00000312547 PSME4Q14997 1843 aa15.37■□□□□ 0.05
CHMP2A-201ENST00000312547 DDNO94850 711 aaPredicted RBP15.36■□□□□ 0.05
CHMP2A-201ENST00000312547 MAP4K4O95819 1239 aaPredicted RBP15.36■□□□□ 0.05
CHMP2A-201ENST00000312547 LDHBP07195 334 aaKnown RBP15.36■□□□□ 0.05
CHMP2A-201ENST00000312547 GMPSP49915 693 aaPredicted RBP15.36■□□□□ 0.05
CHMP2A-201ENST00000312547 SPTY2D1Q68D10 685 aaPredicted RBP15.36■□□□□ 0.05
CHMP2A-201ENST00000312547 ZNF384Q8TF68 577 aa15.36■□□□□ 0.05
CHMP2A-201ENST00000312547 EVI5LQ96CN4 794 aa15.36■□□□□ 0.05
CHMP2A-201ENST00000312547 L3MBTL3Q96JM7 780 aaPredicted RBP15.36■□□□□ 0.05
CHMP2A-201ENST00000312547 ABCF2Q9UG63 623 aa15.36■□□□□ 0.05
CHMP2A-201ENST00000312547 SDSP20132 328 aa15.35■□□□□ 0.05
CHMP2A-201ENST00000312547 SCNN1DP51172 638 aa15.35■□□□□ 0.05
CHMP2A-201ENST00000312547 ZNF280AP59817 542 aaPredicted RBP15.35■□□□□ 0.05
CHMP2A-201ENST00000312547 BMP2KLQ5H9B9 411 aa15.35■□□□□ 0.05
CHMP2A-201ENST00000312547 DPY19L2Q6NUT2 758 aa15.35■□□□□ 0.05
CHMP2A-201ENST00000312547 ERICH6Q7L0X2 663 aa15.35■□□□□ 0.05
CHMP2A-201ENST00000312547 KIAA0825Q8IV33 1275 aa15.35■□□□□ 0.05
CHMP2A-201ENST00000312547 NSUN4Q96CB9 384 aaKnown RBP15.35■□□□□ 0.05
CHMP2A-201ENST00000312547 MRIQ9BWK5 157 aa15.35■□□□□ 0.05
CHMP2A-201ENST00000312547 LRP2BPQ9P2M1 347 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms