RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 PPP1R12AO14974 1030 aaPredicted RBP11.14□□□□□ -0.63
RBFOX1-201ENST00000311745 ZNF445P59923 1031 aa11.14□□□□□ -0.63
RBFOX1-201ENST00000311745 OTUD6BQ8N6M0 293 aa11.14□□□□□ -0.63
RBFOX1-201ENST00000311745 LARP6Q9BRS8 491 aaKnown RBP11.14□□□□□ -0.63
RBFOX1-201ENST00000311745 MED4Q9NPJ6 270 aa11.14□□□□□ -0.63
RBFOX1-201ENST00000311745 IRAK4Q9NWZ3 460 aa11.14□□□□□ -0.63
RBFOX1-201ENST00000311745 ATP5JP18859 108 aa11.14□□□□□ -0.63
RBFOX1-201ENST00000311745 MCM2P49736 904 aa11.14□□□□□ -0.63
RBFOX1-201ENST00000311745 USPL1Q5W0Q7 1092 aa11.14□□□□□ -0.63
RBFOX1-201ENST00000311745 PIGBQ92521 554 aa11.14□□□□□ -0.63
RBFOX1-201ENST00000311745 RIC1Q4ADV7 1423 aa11.14□□□□□ -0.63
RBFOX1-201ENST00000311745 A0A087WZG4 1122 aa11.13□□□□□ -0.63
RBFOX1-201ENST00000311745 DTNBO60941 627 aa11.13□□□□□ -0.63
RBFOX1-201ENST00000311745 IFIT2P09913 472 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-201ENST00000311745 ATG3Q9NT62 314 aa11.13□□□□□ -0.63
RBFOX1-201ENST00000311745 ZNF831Q5JPB2 1677 aa11.13□□□□□ -0.63
RBFOX1-201ENST00000311745 SLFNL1Q499Z3 407 aa11.13□□□□□ -0.63
RBFOX1-201ENST00000311745 NOM1Q5C9Z4 860 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-201ENST00000311745 BOLA2Q9H3K6 86 aa11.13□□□□□ -0.63
RBFOX1-201ENST00000311745 ASAP1Q9ULH1 1129 aa11.13□□□□□ -0.63
RBFOX1-201ENST00000311745 RFX7Q2KHR2 1363 aa11.13□□□□□ -0.63
RBFOX1-201ENST00000311745 CAND2O75155 1236 aa11.13□□□□□ -0.63
RBFOX1-201ENST00000311745 PRPF40AO75400 957 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-201ENST00000311745 DBNDD2Q9BQY9 259 aa11.13□□□□□ -0.63
RBFOX1-201ENST00000311745 ECM29Q5VYK3 1845 aa11.12□□□□□ -0.63
RBFOX1-201ENST00000311745 G3BP1Q13283 466 aaKnown RBP eCLIP11.12□□□□□ -0.63
RBFOX1-201ENST00000311745 NOL8Q76FK4 1167 aaKnown RBP11.12□□□□□ -0.63
RBFOX1-201ENST00000311745 TM6SF1Q9BZW5 370 aa11.12□□□□□ -0.63
RBFOX1-201ENST00000311745 SLC27A2O14975 620 aa11.12□□□□□ -0.63
RBFOX1-201ENST00000311745 NEXNQ0ZGT2 675 aa11.12□□□□□ -0.63
RBFOX1-201ENST00000311745 TEX35Q5T0J7 233 aa11.12□□□□□ -0.63
RBFOX1-201ENST00000311745 CREB3L3Q68CJ9 461 aa11.12□□□□□ -0.63
RBFOX1-201ENST00000311745 PRPF40BQ6NWY9 871 aaKnown RBP11.12□□□□□ -0.63
RBFOX1-201ENST00000311745 LMBR1LQ6UX01 489 aa11.12□□□□□ -0.63
RBFOX1-201ENST00000311745 PACS2Q86VP3 889 aa11.12□□□□□ -0.63
RBFOX1-201ENST00000311745 RBM8AQ9Y5S9 174 aaKnown RBP11.12□□□□□ -0.63
RBFOX1-201ENST00000311745 PALLDQ8WX93 1383 aa11.12□□□□□ -0.63
RBFOX1-201ENST00000311745 FOXP2O15409 715 aa11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 TAF5LO75529 589 aa11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 NPM3O75607 178 aaKnown RBP11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 ZSCAN26Q16670 478 aa11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 TSGA10IPQ3SY00 556 aa11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 LRRC24Q50LG9 513 aa11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 HAUS7Q99871 368 aa11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 TMEM63CQ9P1W3 806 aa11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 CWC15Q9P013 229 aaKnown RBP11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 USP25Q9UHP3 1055 aa11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 RRP15Q9Y3B9 282 aaKnown RBP11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 C4AP0C0L4 1744 aa11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 C4BP0C0L5 1744 aa11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 SCP2P22307 547 aa11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 TOB2Q14106 344 aaPredicted RBP11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 DDX54Q8TDD1 881 aaKnown RBP11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 TPCN1Q9ULQ1 816 aa11.11□□□□□ -0.63
RBFOX1-201ENST00000311745 A0A0G2JLW4 131 aa11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 ANKRD65E5RJM6 399 aa11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 NEBLO76041 1014 aa11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 ME3Q16798 604 aa11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 VPS53Q5VIR6 699 aa11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 ZNF594Q96JF6 807 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 C16orf45Q96MC5 204 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 SEC62Q99442 399 aaKnown RBP11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 PUS3Q9BZE2 481 aaKnown RBP11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 ALDH8A1Q9H2A2 487 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 STRN4Q9NRL3 753 aa11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 CASTP20810 708 aaKnown RBP11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 CCT2P78371 535 aaKnown RBP11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 BMS1Q14692 1282 aaKnown RBP11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 FOXD4L5Q5VV16 416 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 SYNE4Q8N205 404 aa11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 FOXD4L4Q8WXT5 416 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 ZBTB3Q9H5J0 574 aa11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 CTIFO43310 598 aaKnown RBP11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 NAIF1Q69YI7 327 aaPredicted RBP11.1□□□□□ -0.63
RBFOX1-201ENST00000311745 GADD45BO75293 160 aaPredicted RBP11.09□□□□□ -0.63
RBFOX1-201ENST00000311745 TXLNBQ8N3L3 684 aa11.09□□□□□ -0.63
RBFOX1-201ENST00000311745 FAM184AQ8NB25 1140 aa11.09□□□□□ -0.63
RBFOX1-201ENST00000311745 TMEM87AQ8NBN3 555 aa11.09□□□□□ -0.63
RBFOX1-201ENST00000311745 CWC25Q9NXE8 425 aaPredicted RBP11.09□□□□□ -0.63
RBFOX1-201ENST00000311745 BTG4Q9NY30 223 aa11.09□□□□□ -0.63
RBFOX1-201ENST00000311745 POLD1P28340 1107 aa11.09□□□□□ -0.63
RBFOX1-201ENST00000311745 HLFQ16534 295 aa11.09□□□□□ -0.63
RBFOX1-201ENST00000311745 KMT5BQ4FZB7 885 aa11.09□□□□□ -0.63
RBFOX1-201ENST00000311745 CCDC129Q6ZRS4 1044 aa11.09□□□□□ -0.63
RBFOX1-201ENST00000311745 DNAJC10Q8IXB1 793 aa11.09□□□□□ -0.63
RBFOX1-201ENST00000311745 CCDC112Q8NEF3 446 aa11.09□□□□□ -0.63
RBFOX1-201ENST00000311745 PLA2G12BQ9BX93 195 aa11.09□□□□□ -0.63
RBFOX1-201ENST00000311745 CSF1RP07333 972 aa11.08□□□□□ -0.64
RBFOX1-201ENST00000311745 TRIM28Q13263 835 aaKnown RBP11.08□□□□□ -0.64
RBFOX1-201ENST00000311745 ZKSCAN8Q15776 578 aaPredicted RBP11.08□□□□□ -0.64
RBFOX1-201ENST00000311745 STOX1Q6ZVD7 989 aa11.08□□□□□ -0.64
RBFOX1-201ENST00000311745 SPC24Q8NBT2 197 aa11.08□□□□□ -0.64
RBFOX1-201ENST00000311745 GPR108Q9NPR9 543 aa11.08□□□□□ -0.64
RBFOX1-201ENST00000311745 BIN2Q9UBW5 565 aaPredicted RBP11.08□□□□□ -0.64
RBFOX1-201ENST00000311745 LIMCH1Q9UPQ0 1083 aa11.08□□□□□ -0.64
RBFOX1-201ENST00000311745 MNAT1P51948 309 aa11.08□□□□□ -0.64
RBFOX1-201ENST00000311745 JAKMIP1Q96N16 626 aaKnown RBP11.08□□□□□ -0.64
RBFOX1-201ENST00000311745 TPM3P06753 285 aa11.08□□□□□ -0.64
RBFOX1-201ENST00000311745 CYP19A1P11511 503 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms