RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 PCMTD2Q9NV79 361 aa7.06□□□□□ -1.28
CKS1B-201ENST00000308987 ZNF232Q9UNY5 417 aa7.06□□□□□ -1.28
CKS1B-201ENST00000308987 ADGRL3Q9HAR2 1447 aa7.06□□□□□ -1.28
CKS1B-201ENST00000308987 ARID1BQ8NFD5 2236 aaPredicted RBP7.05□□□□□ -1.28
CKS1B-201ENST00000308987 PPLO60437 1756 aa7.05□□□□□ -1.28
CKS1B-201ENST00000308987 IREB2P48200 963 aaKnown RBP7.05□□□□□ -1.28
CKS1B-201ENST00000308987 AFF1P51825 1210 aaKnown RBP7.05□□□□□ -1.28
CKS1B-201ENST00000308987 KCNQ4P56696 695 aa7.05□□□□□ -1.28
CKS1B-201ENST00000308987 TBC1D8BQ0IIM8 1120 aa7.05□□□□□ -1.28
CKS1B-201ENST00000308987 BHMTQ93088 406 aa7.05□□□□□ -1.28
CKS1B-201ENST00000308987 IGFLR1Q9H665 355 aa7.05□□□□□ -1.28
CKS1B-201ENST00000308987 BRD7Q9NPI1 651 aa7.05□□□□□ -1.28
CKS1B-201ENST00000308987 SLC6A14Q9UN76 642 aa7.05□□□□□ -1.28
CKS1B-201ENST00000308987 KCNH4Q9UQ05 1017 aa7.05□□□□□ -1.28
CKS1B-201ENST00000308987 BRWD3Q6RI45 1802 aa7.05□□□□□ -1.28
CKS1B-201ENST00000308987 C1orf167Q5SNV9 1468 aa7.04□□□□□ -1.28
CKS1B-201ENST00000308987 SFI1A8K8P3 1242 aa7.04□□□□□ -1.28
CKS1B-201ENST00000308987 VAC14Q08AM6 782 aa7.04□□□□□ -1.28
CKS1B-201ENST00000308987 TBCELQ5QJ74 424 aa7.04□□□□□ -1.28
CKS1B-201ENST00000308987 SH3PXD2AQ5TCZ1 1133 aa7.04□□□□□ -1.28
CKS1B-201ENST00000308987 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.04□□□□□ -1.28
CKS1B-201ENST00000308987 RHPN1Q8TCX5 695 aa7.04□□□□□ -1.28
CKS1B-201ENST00000308987 UBE2OQ9C0C9 1292 aaKnown RBP7.04□□□□□ -1.28
CKS1B-201ENST00000308987 QTRT2Q9H974 415 aaKnown RBP7.04□□□□□ -1.28
CKS1B-201ENST00000308987 RGPD8O14715 1765 aaPredicted RBP7.04□□□□□ -1.28
CKS1B-201ENST00000308987 COL22A1Q8NFW1 1626 aaPredicted RBP7.04□□□□□ -1.28
CKS1B-201ENST00000308987 SLC9A9Q8IVB4 645 aa7.03□□□□□ -1.28
CKS1B-201ENST00000308987 C8orf37Q96NL8 207 aa7.03□□□□□ -1.28
CKS1B-201ENST00000308987 ZNF358Q9NW07 568 aa7.03□□□□□ -1.28
CKS1B-201ENST00000308987 ROBO2Q9HCK4 1378 aa7.03□□□□□ -1.28
CKS1B-201ENST00000308987 SERTM1A2A2V5 107 aa7.02□□□□□ -1.29
CKS1B-201ENST00000308987 NOS3P29474 1203 aa7.02□□□□□ -1.29
CKS1B-201ENST00000308987 SSTR4P31391 388 aa7.02□□□□□ -1.29
CKS1B-201ENST00000308987 ITGAEP38570 1179 aa7.02□□□□□ -1.29
CKS1B-201ENST00000308987 EPHA4P54764 986 aa7.02□□□□□ -1.29
CKS1B-201ENST00000308987 RBM6P78332 1123 aaKnown RBP7.02□□□□□ -1.29
CKS1B-201ENST00000308987 PSAPL1Q6NUJ1 521 aa7.02□□□□□ -1.29
CKS1B-201ENST00000308987 LRRC59Q96AG4 307 aaKnown RBP7.02□□□□□ -1.29
CKS1B-201ENST00000308987 HSH2DQ96JZ2 352 aa7.02□□□□□ -1.29
CKS1B-201ENST00000308987 ORAI2Q96SN7 254 aa7.02□□□□□ -1.29
CKS1B-201ENST00000308987 PTCH1Q13635 1447 aa7.01□□□□□ -1.29
CKS1B-201ENST00000308987 PRAG1Q86YV5 1406 aa7.01□□□□□ -1.29
CKS1B-201ENST00000308987 IFT172Q9UG01 1749 aa7.01□□□□□ -1.29
CKS1B-201ENST00000308987 ABL2P42684 1182 aa7.01□□□□□ -1.29
CKS1B-201ENST00000308987 BRPF1P55201 1214 aaPredicted RBP7.01□□□□□ -1.29
CKS1B-201ENST00000308987 ZNF326Q5BKZ1 582 aaKnown RBP7.01□□□□□ -1.29
CKS1B-201ENST00000308987 PRR23CQ6ZRP0 262 aa7.01□□□□□ -1.29
CKS1B-201ENST00000308987 TNS4Q8IZW8 715 aa7.01□□□□□ -1.29
CKS1B-201ENST00000308987 MEGF10Q96KG7 1140 aa7.01□□□□□ -1.29
CKS1B-201ENST00000308987 ANKIB1Q9P2G1 1089 aa7.01□□□□□ -1.29
CKS1B-201ENST00000308987 ATRNO75882 1429 aa7.01□□□□□ -1.29
CKS1B-201ENST00000308987 MYOM2P54296 1465 aa7□□□□□ -1.29
CKS1B-201ENST00000308987 BCL9LQ86UU0 1499 aa7□□□□□ -1.29
CKS1B-201ENST00000308987 PXDNQ92626 1479 aa7□□□□□ -1.29
CKS1B-201ENST00000308987 RGS9O75916 674 aaPredicted RBP7□□□□□ -1.29
CKS1B-201ENST00000308987 IRAK1P51617 712 aa7□□□□□ -1.29
CKS1B-201ENST00000308987 TYRO3Q06418 890 aa7□□□□□ -1.29
CKS1B-201ENST00000308987 FBXO11Q86XK2 927 aa7□□□□□ -1.29
CKS1B-201ENST00000308987 ZNF280CQ8ND82 737 aa7□□□□□ -1.29
CKS1B-201ENST00000308987 HCN4Q9Y3Q4 1203 aa7□□□□□ -1.29
CKS1B-201ENST00000308987 TNKS1BP1Q9C0C2 1729 aaKnown RBP7□□□□□ -1.29
CKS1B-201ENST00000308987 NAIPQ13075 1403 aa7□□□□□ -1.29
CKS1B-201ENST00000308987 GLI3P10071 1580 aa6.99□□□□□ -1.29
CKS1B-201ENST00000308987 TAL1P17542 331 aaPredicted RBP6.99□□□□□ -1.29
CKS1B-201ENST00000308987 GTF2IP78347 998 aa6.99□□□□□ -1.29
CKS1B-201ENST00000308987 C1orf53Q5VUE5 145 aa6.99□□□□□ -1.29
CKS1B-201ENST00000308987 FNBP4Q8N3X1 1017 aaPredicted RBP6.99□□□□□ -1.29
CKS1B-201ENST00000308987 NGLY1Q96IV0 654 aa6.99□□□□□ -1.29
CKS1B-201ENST00000308987 DNAJB12Q9NXW2 375 aaKnown RBP6.99□□□□□ -1.29
CKS1B-201ENST00000308987 NAGPAQ9UK23 515 aa6.99□□□□□ -1.29
CKS1B-201ENST00000308987 CDC42BPGQ6DT37 1551 aa6.99□□□□□ -1.29
CKS1B-201ENST00000308987 FMN2Q9NZ56 1722 aa6.98□□□□□ -1.29
CKS1B-201ENST00000308987 PIK3CDO00329 1044 aa6.98□□□□□ -1.29
CKS1B-201ENST00000308987 PSME1Q06323 249 aa6.98□□□□□ -1.29
CKS1B-201ENST00000308987 SEMA3FQ13275 785 aa6.98□□□□□ -1.29
CKS1B-201ENST00000308987 MSL1Q68DK7 614 aa6.98□□□□□ -1.29
CKS1B-201ENST00000308987 SLC51AQ86UW1 340 aa6.98□□□□□ -1.29
CKS1B-201ENST00000308987 DTWD1Q8N5C7 304 aa6.98□□□□□ -1.29
CKS1B-201ENST00000308987 SUSD3Q96L08 255 aa6.98□□□□□ -1.29
CKS1B-201ENST00000308987 NOD1Q9Y239 953 aa6.98□□□□□ -1.29
CKS1B-201ENST00000308987 KNDC1Q76NI1 1749 aa6.98□□□□□ -1.29
CKS1B-201ENST00000308987 ABCA3Q99758 1704 aa6.98□□□□□ -1.29
CKS1B-201ENST00000308987 FSTP19883 344 aa6.97□□□□□ -1.29
CKS1B-201ENST00000308987 CD97P48960 835 aa6.97□□□□□ -1.29
CKS1B-201ENST00000308987 FZD5Q13467 585 aa6.97□□□□□ -1.29
CKS1B-201ENST00000308987 EML3Q32P44 896 aa6.97□□□□□ -1.29
CKS1B-201ENST00000308987 IGF2-ASQ6U949 168 aa6.97□□□□□ -1.29
CKS1B-201ENST00000308987 PHACTR1Q9C0D0 580 aa6.97□□□□□ -1.29
CKS1B-201ENST00000308987 ATAD2Q6PL18 1390 aa6.96□□□□□ -1.29
CKS1B-201ENST00000308987 HFM1A2PYH4 1435 aa6.96□□□□□ -1.3
CKS1B-201ENST00000308987 RRBP1Q9P2E9 1410 aaKnown RBP6.96□□□□□ -1.3
CKS1B-201ENST00000308987 XPCQ01831 940 aaPredicted RBP6.96□□□□□ -1.3
CKS1B-201ENST00000308987 GDPD2Q9HCC8 539 aa6.96□□□□□ -1.3
CKS1B-201ENST00000308987 GTF3C3Q9Y5Q9 886 aa6.96□□□□□ -1.3
CKS1B-201ENST00000308987 OAS3Q9Y6K5 1087 aaKnown RBP6.96□□□□□ -1.3
CKS1B-201ENST00000308987 PLCH1Q4KWH8 1693 aa6.96□□□□□ -1.3
CKS1B-201ENST00000308987 ADGRF5Q8IZF2 1346 aa6.96□□□□□ -1.3
CKS1B-201ENST00000308987 PLEKHH1Q9ULM0 1364 aa6.95□□□□□ -1.3
CKS1B-201ENST00000308987 USP32Q8NFA0 1604 aa6.95□□□□□ -1.3
CKS1B-201ENST00000308987 MED26O95402 600 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms