RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 MAP9Q49MG5 647 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 POTEDQ86YR6 584 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 JMYQ8N9B5 988 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 NEK1Q96PY6 1258 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 CARD6Q9BX69 1037 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 PPP2R2CQ9Y2T4 447 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 POLR3GO15318 223 aaPredicted RBP6.2□□□□□ -1.42
USP8-201ENST00000307179 SLC3A2P08195 630 aaKnown RBP6.2□□□□□ -1.42
USP8-201ENST00000307179 AARSP49588 968 aaKnown RBP eCLIP6.2□□□□□ -1.42
USP8-201ENST00000307179 ZNF274Q96GC6 653 aaPredicted RBP6.2□□□□□ -1.42
USP8-201ENST00000307179 GOLPH3LQ9H4A5 285 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 TUBE1Q9UJT0 475 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 WDR19Q8NEZ3 1342 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 SH3TC1Q8TE82 1336 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.2□□□□□ -1.42
USP8-201ENST00000307179 PIP4K2BP78356 416 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 ARID5BQ14865 1188 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 BEND3Q5T5X7 828 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 C10orf67Q8IYJ2 551 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 CCDC51Q96ER9 411 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 DIP2BQ9P265 1576 aa6.2□□□□□ -1.42
USP8-201ENST00000307179 SASH3O75995 380 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 TOP1P11387 765 aaKnown RBP6.19□□□□□ -1.42
USP8-201ENST00000307179 TBX2Q13207 712 aaPredicted RBP6.19□□□□□ -1.42
USP8-201ENST00000307179 OLFM4Q6UX06 510 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 CEP120Q8N960 986 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 NFATC2IPQ8NCF5 419 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 RPGRIP1Q96KN7 1286 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 PANX2Q96RD6 677 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 SDF4Q9BRK5 362 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 A1CFQ9NQ94 594 aaKnown RBP6.19□□□□□ -1.42
USP8-201ENST00000307179 TFIP11Q9UBB9 837 aaKnown RBP6.19□□□□□ -1.42
USP8-201ENST00000307179 CHMP3Q9Y3E7 222 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 CARMIL3Q8ND23 1372 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 PALLDQ8WX93 1383 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 VWA3AA6NCI4 1184 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 CMA1P23946 247 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 ST5P78524 1137 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 RRS1Q15050 365 aaKnown RBP6.19□□□□□ -1.42
USP8-201ENST00000307179 MTHFSDQ2M296 383 aaKnown RBP6.19□□□□□ -1.42
USP8-201ENST00000307179 NSUN7Q8NE18 718 aaKnown RBP6.19□□□□□ -1.42
USP8-201ENST00000307179 KIFC2Q96AC6 838 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 PARD6BQ9BYG5 372 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 MAP3K19Q56UN5 1328 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 LTN1O94822 1766 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 ME1P48163 572 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 GSCP56915 257 aaPredicted RBP6.19□□□□□ -1.42
USP8-201ENST00000307179 CHMP4BP1P59074 171 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 NCAPHQ15003 741 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 GBP6Q6ZN66 633 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 ARHGEF25Q86VW2 580 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 STAG1Q8WVM7 1258 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 KIF1AQ12756 1690 aa6.19□□□□□ -1.42
USP8-201ENST00000307179 HSP90B1P14625 803 aaKnown RBP6.18□□□□□ -1.42
USP8-201ENST00000307179 SETQ01105 290 aaPredicted RBP6.18□□□□□ -1.42
USP8-201ENST00000307179 DNAJC21Q5F1R6 531 aaKnown RBP6.18□□□□□ -1.42
USP8-201ENST00000307179 HDGFL1Q5TGJ6 251 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 WDR93Q6P2C0 686 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 TRIML1Q8N9V2 468 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 FSD1Q9BTV5 496 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 CDC23Q9UJX2 597 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 UBR1Q8IWV7 1749 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 AFDNP55196 1824 aaKnown RBP6.18□□□□□ -1.42
USP8-201ENST00000307179 EIF3CLB5ME19 914 aaKnown RBP6.18□□□□□ -1.42
USP8-201ENST00000307179 CCDC175P0C221 793 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 CPA1P15085 419 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 AMPHP49418 695 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 UBASH3AP57075 661 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 BEND6Q5SZJ8 279 aaPredicted RBP6.18□□□□□ -1.42
USP8-201ENST00000307179 EIF3CQ99613 913 aaKnown RBP6.18□□□□□ -1.42
USP8-201ENST00000307179 BAG1Q99933 345 aaPredicted RBP6.18□□□□□ -1.42
USP8-201ENST00000307179 DSCC1Q9BVC3 393 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 MYH7P12883 1935 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 TMCO5BA8MYB1 307 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 PPP6R2O75170 966 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 TAF5LO75529 589 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 CALRP27797 417 aaKnown RBP6.18□□□□□ -1.42
USP8-201ENST00000307179 STK38Q15208 465 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 DHX32Q7L7V1 743 aaKnown RBP6.18□□□□□ -1.42
USP8-201ENST00000307179 TADA2BQ86TJ2 420 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 TTF2Q9UNY4 1162 aaKnown RBP6.18□□□□□ -1.42
USP8-201ENST00000307179 WDR17Q8IZU2 1322 aa6.18□□□□□ -1.42
USP8-201ENST00000307179 PTPDC1A2A3K4 754 aa6.17□□□□□ -1.42
USP8-201ENST00000307179 TARSL2A2RTX5 802 aaKnown RBP6.17□□□□□ -1.42
USP8-201ENST00000307179 KIF5CO60282 957 aa6.17□□□□□ -1.42
USP8-201ENST00000307179 MAP4K4O95819 1239 aaPredicted RBP6.17□□□□□ -1.42
USP8-201ENST00000307179 G3BP1Q13283 466 aaKnown RBP eCLIP6.17□□□□□ -1.42
USP8-201ENST00000307179 GNL2Q13823 731 aaKnown RBP6.17□□□□□ -1.42
USP8-201ENST00000307179 KIF4BQ2VIQ3 1234 aa6.17□□□□□ -1.42
USP8-201ENST00000307179 TMEM139Q8IV31 216 aa6.17□□□□□ -1.42
USP8-201ENST00000307179 LINC00301Q8NCQ3 95 aa6.17□□□□□ -1.42
USP8-201ENST00000307179 USP28Q96RU2 1077 aa6.17□□□□□ -1.42
USP8-201ENST00000307179 SEMA3EO15041 775 aa6.17□□□□□ -1.42
USP8-201ENST00000307179 CUTAO60888 179 aa6.17□□□□□ -1.42
USP8-201ENST00000307179 SHOX2O60902 331 aaPredicted RBP6.17□□□□□ -1.42
USP8-201ENST00000307179 SEC31AO94979 1220 aaKnown RBP6.17□□□□□ -1.42
USP8-201ENST00000307179 ATP5JP18859 108 aa6.17□□□□□ -1.42
USP8-201ENST00000307179 GNG11P61952 73 aa6.17□□□□□ -1.42
USP8-201ENST00000307179 Q6ZUG5 572 aa6.17□□□□□ -1.42
USP8-201ENST00000307179 AACSQ86V21 672 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms