RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 PTCH2Q9Y6C5 1203 aa12.99□□□□□ -0.33
COL4A3-201ENST00000304990 UNCXA6NJT0 531 aa12.98□□□□□ -0.33
COL4A3-201ENST00000304990 F8W031 263 aaPredicted RBP12.98□□□□□ -0.33
COL4A3-201ENST00000304990 ELL2O00472 640 aaPredicted RBP12.98□□□□□ -0.33
COL4A3-201ENST00000304990 DLL1O00548 723 aa12.98□□□□□ -0.33
COL4A3-201ENST00000304990 RBM5P52756 815 aaKnown RBP eCLIP12.98□□□□□ -0.33
COL4A3-201ENST00000304990 KIF22Q14807 665 aa12.98□□□□□ -0.33
COL4A3-201ENST00000304990 TAF1CQ15572 869 aaPredicted RBP12.98□□□□□ -0.33
COL4A3-201ENST00000304990 CHRDL2Q6WN34 429 aa12.98□□□□□ -0.33
COL4A3-201ENST00000304990 TXNRD3Q86VQ6 643 aa12.98□□□□□ -0.33
COL4A3-201ENST00000304990 DPF3Q92784 378 aa12.98□□□□□ -0.33
COL4A3-201ENST00000304990 MPHOSPH8Q99549 860 aa12.98□□□□□ -0.33
COL4A3-201ENST00000304990 METTL22Q9BUU2 404 aaPredicted RBP12.98□□□□□ -0.33
COL4A3-201ENST00000304990 ZFYVE28Q9HCC9 887 aa12.98□□□□□ -0.33
COL4A3-201ENST00000304990 KIAA0100Q14667 2235 aaKnown RBP12.98□□□□□ -0.33
COL4A3-201ENST00000304990 NEXNQ0ZGT2 675 aa12.97□□□□□ -0.33
COL4A3-201ENST00000304990 WDR43Q15061 677 aaKnown RBP eCLIP12.97□□□□□ -0.33
COL4A3-201ENST00000304990 NBPF12Q5TAG4 269 aaPredicted RBP12.97□□□□□ -0.33
COL4A3-201ENST00000304990 SLC17A8Q8NDX2 589 aa12.97□□□□□ -0.33
COL4A3-201ENST00000304990 TTLL11Q8NHH1 800 aa12.97□□□□□ -0.33
COL4A3-201ENST00000304990 OPTNQ96CV9 577 aa12.97□□□□□ -0.33
COL4A3-201ENST00000304990 ZBED3Q96IU2 234 aaPredicted RBP12.97□□□□□ -0.33
COL4A3-201ENST00000304990 ELP3Q9H9T3 547 aa12.97□□□□□ -0.33
COL4A3-201ENST00000304990 TRIM35Q9UPQ4 493 aa12.97□□□□□ -0.33
COL4A3-201ENST00000304990 MAP3K2Q9Y2U5 619 aa12.97□□□□□ -0.33
COL4A3-201ENST00000304990 OTOFQ9HC10 1997 aa12.97□□□□□ -0.33
COL4A3-201ENST00000304990 SSC5DA1L4H1 1573 aa12.97□□□□□ -0.33
COL4A3-201ENST00000304990 CFAP100Q494V2 611 aa12.96□□□□□ -0.33
COL4A3-201ENST00000304990 RUNDC1Q96C34 613 aa12.96□□□□□ -0.33
COL4A3-201ENST00000304990 PTPN18Q99952 460 aa12.96□□□□□ -0.33
COL4A3-201ENST00000304990 MBIPQ9NS73 344 aa12.96□□□□□ -0.33
COL4A3-201ENST00000304990 USP2O75604 605 aaPredicted RBP12.95□□□□□ -0.34
COL4A3-201ENST00000304990 KLRK1P26718 216 aa12.95□□□□□ -0.34
COL4A3-201ENST00000304990 GJA5P36382 358 aa12.95□□□□□ -0.34
COL4A3-201ENST00000304990 SH3TC2Q8TF17 1288 aa12.95□□□□□ -0.34
COL4A3-201ENST00000304990 OTUD5Q96G74 571 aa12.95□□□□□ -0.34
COL4A3-201ENST00000304990 CHMP4AQ9BY43 222 aa12.95□□□□□ -0.34
COL4A3-201ENST00000304990 CD209Q9NNX6 404 aa12.95□□□□□ -0.34
COL4A3-201ENST00000304990 CCL15-CCL14A0A0B4J2E2 113 aa12.94□□□□□ -0.34
COL4A3-201ENST00000304990 TESPA1A2RU30 521 aaPredicted RBP12.94□□□□□ -0.34
COL4A3-201ENST00000304990 ECM2O94769 699 aaPredicted RBP12.94□□□□□ -0.34
COL4A3-201ENST00000304990 GTF2A2P52657 109 aa12.94□□□□□ -0.34
COL4A3-201ENST00000304990 TNFAIP1Q13829 316 aa12.94□□□□□ -0.34
COL4A3-201ENST00000304990 RASA3Q14644 834 aa12.94□□□□□ -0.34
COL4A3-201ENST00000304990 CCL15Q16663 113 aa12.94□□□□□ -0.34
COL4A3-201ENST00000304990 CCDC30Q5VVM6 783 aa12.94□□□□□ -0.34
COL4A3-201ENST00000304990 MTMR14Q8NCE2 650 aa12.94□□□□□ -0.34
COL4A3-201ENST00000304990 PCDHAC2Q9Y5I4 1007 aa12.94□□□□□ -0.34
COL4A3-201ENST00000304990 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
COL4A3-201ENST00000304990 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
COL4A3-201ENST00000304990 ITGA6P23229 1130 aa12.93□□□□□ -0.34
COL4A3-201ENST00000304990 CAP1Q01518 475 aa12.93□□□□□ -0.34
COL4A3-201ENST00000304990 UBE3BQ7Z3V4 1068 aa12.93□□□□□ -0.34
COL4A3-201ENST00000304990 ZNF804AQ7Z570 1209 aa12.93□□□□□ -0.34
COL4A3-201ENST00000304990 PRMT6Q96LA8 375 aaPredicted RBP12.93□□□□□ -0.34
COL4A3-201ENST00000304990 RBM27Q9P2N5 1060 aaKnown RBP12.93□□□□□ -0.34
COL4A3-201ENST00000304990 CSADQ9Y600 493 aa12.93□□□□□ -0.34
COL4A3-201ENST00000304990 ZSWIM8A7E2V4 1837 aa12.92□□□□□ -0.34
COL4A3-201ENST00000304990 CHRNDQ07001 517 aa12.92□□□□□ -0.34
COL4A3-201ENST00000304990 RALBP1Q15311 655 aa12.92□□□□□ -0.34
COL4A3-201ENST00000304990 KSR2Q6VAB6 950 aa12.92□□□□□ -0.34
COL4A3-201ENST00000304990 CERS5Q8N5B7 392 aa12.92□□□□□ -0.34
COL4A3-201ENST00000304990 BRI3BPQ8WY22 251 aa12.92□□□□□ -0.34
COL4A3-201ENST00000304990 HTATIP2Q9BUP3 242 aa12.92□□□□□ -0.34
COL4A3-201ENST00000304990 JAG2Q9Y219 1238 aa12.92□□□□□ -0.34
COL4A3-201ENST00000304990 PI4KAP2A4QPH2 592 aa12.91□□□□□ -0.34
COL4A3-201ENST00000304990 GNAI1P63096 354 aa12.91□□□□□ -0.34
COL4A3-201ENST00000304990 CALD1Q05682 793 aaKnown RBP12.91□□□□□ -0.34
COL4A3-201ENST00000304990 CWF19L2Q2TBE0 894 aaKnown RBP12.91□□□□□ -0.34
COL4A3-201ENST00000304990 PI4KAP1Q8N8J0 262 aa12.91□□□□□ -0.34
COL4A3-201ENST00000304990 MS4A4AQ96JQ5 239 aa12.91□□□□□ -0.34
COL4A3-201ENST00000304990 ANKRD18BA2A2Z9 1011 aa12.9□□□□□ -0.34
COL4A3-201ENST00000304990 TAF5LO75529 589 aa12.9□□□□□ -0.34
COL4A3-201ENST00000304990 GNRH1P01148 92 aa12.9□□□□□ -0.34
COL4A3-201ENST00000304990 IGKV5-2P06315 115 aa12.9□□□□□ -0.34
COL4A3-201ENST00000304990 TNNI2P48788 182 aa12.9□□□□□ -0.34
COL4A3-201ENST00000304990 PRMT2P55345 433 aa12.9□□□□□ -0.34
COL4A3-201ENST00000304990 MAP3K9P80192 1104 aa12.9□□□□□ -0.34
COL4A3-201ENST00000304990 LACTBP83111 547 aaPredicted RBP12.9□□□□□ -0.34
COL4A3-201ENST00000304990 FAM43AQ8N2R8 423 aa12.9□□□□□ -0.34
COL4A3-201ENST00000304990 HELBQ8NG08 1087 aaPredicted RBP12.9□□□□□ -0.34
COL4A3-201ENST00000304990 NKX2-3Q8TAU0 364 aa12.9□□□□□ -0.34
COL4A3-201ENST00000304990 STK31Q9BXU1 1019 aa12.9□□□□□ -0.34
COL4A3-201ENST00000304990 ARHGAP39Q9C0H5 1083 aa12.9□□□□□ -0.34
COL4A3-201ENST00000304990 IFT57Q9NWB7 429 aa12.9□□□□□ -0.34
COL4A3-201ENST00000304990 CHMP3Q9Y3E7 222 aa12.9□□□□□ -0.34
COL4A3-201ENST00000304990 NR2E3Q9Y5X4 410 aa12.9□□□□□ -0.34
COL4A3-201ENST00000304990 A0A1B0GUL6 1792 aa12.89□□□□□ -0.35
COL4A3-201ENST00000304990 NEURL1BA8MQ27 555 aa12.89□□□□□ -0.35
COL4A3-201ENST00000304990 TCP10L2B9ZVM9 353 aa12.89□□□□□ -0.35
COL4A3-201ENST00000304990 CETPP11597 493 aa12.89□□□□□ -0.35
COL4A3-201ENST00000304990 FKBP1AP62942 108 aaKnown RBP12.89□□□□□ -0.35
COL4A3-201ENST00000304990 VGLL4Q14135 290 aa12.89□□□□□ -0.35
COL4A3-201ENST00000304990 RAET1EQ8TD07 263 aa12.89□□□□□ -0.35
COL4A3-201ENST00000304990 TDRD3Q9H7E2 651 aaKnown RBP12.89□□□□□ -0.35
COL4A3-201ENST00000304990 BIN2Q9UBW5 565 aaPredicted RBP12.89□□□□□ -0.35
COL4A3-201ENST00000304990 ZNF70Q9UC06 446 aaPredicted RBP12.89□□□□□ -0.35
COL4A3-201ENST00000304990 MKI67P46013 3256 aaKnown RBP12.89□□□□□ -0.35
COL4A3-201ENST00000304990 ARAP2Q8WZ64 1704 aa12.88□□□□□ -0.35
COL4A3-201ENST00000304990 H7C1W4 665 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms