RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 TDRD7Q8NHU6 1098 aaKnown RBP33.01■■■□□ 2.87
CDKN2A-201ENST00000304494 FBXO3Q9UK99 471 aa33.01■■■□□ 2.87
CDKN2A-201ENST00000304494 WNT10BO00744 389 aa33■■■□□ 2.87
CDKN2A-201ENST00000304494 PUM3Q15397 648 aaKnown RBP33■■■□□ 2.87
CDKN2A-201ENST00000304494 ZKSCAN2Q63HK3 967 aa33■■■□□ 2.87
CDKN2A-201ENST00000304494 CERS5Q8N5B7 392 aa33■■■□□ 2.87
CDKN2A-201ENST00000304494 FAM205AQ6ZU69 1335 aa33■■■□□ 2.87
CDKN2A-201ENST00000304494 CYP4F22Q6NT55 531 aa32.99■■■□□ 2.87
CDKN2A-201ENST00000304494 POLR2AP24928 1970 aaKnown RBP32.99■■■□□ 2.87
CDKN2A-201ENST00000304494 C2orf69Q8N8R5 385 aa32.98■■■□□ 2.87
CDKN2A-201ENST00000304494 CDCA5Q96FF9 252 aa32.98■■■□□ 2.87
CDKN2A-201ENST00000304494 CIAO1O76071 339 aa32.97■■■□□ 2.87
CDKN2A-201ENST00000304494 IFIT1P09914 478 aaKnown RBP32.97■■■□□ 2.87
CDKN2A-201ENST00000304494 FBXO33Q7Z6M2 555 aa32.97■■■□□ 2.87
CDKN2A-201ENST00000304494 GBA2Q9HCG7 927 aaPredicted RBP32.97■■■□□ 2.87
CDKN2A-201ENST00000304494 GRM1Q13255 1194 aa32.96■■■□□ 2.87
CDKN2A-201ENST00000304494 CLUAP1Q96AJ1 413 aa32.96■■■□□ 2.87
CDKN2A-201ENST00000304494 JAG2Q9Y219 1238 aa32.96■■■□□ 2.87
CDKN2A-201ENST00000304494 HUNKP57058 714 aa32.95■■■□□ 2.87
CDKN2A-201ENST00000304494 MAP2K1Q02750 393 aaPredicted RBP32.95■■■□□ 2.87
CDKN2A-201ENST00000304494 DLGAP5Q15398 846 aa32.95■■■□□ 2.87
CDKN2A-201ENST00000304494 ATG9AQ7Z3C6 839 aa32.95■■■□□ 2.87
CDKN2A-201ENST00000304494 AIDAQ96BJ3 306 aa32.95■■■□□ 2.87
CDKN2A-201ENST00000304494 F8W031 263 aaPredicted RBP32.94■■■□□ 2.86
CDKN2A-201ENST00000304494 FGFR2P21802 821 aa32.94■■■□□ 2.86
CDKN2A-201ENST00000304494 MTMR14Q8NCE2 650 aa32.94■■■□□ 2.86
CDKN2A-201ENST00000304494 ZBED3Q96IU2 234 aaPredicted RBP32.94■■■□□ 2.86
CDKN2A-201ENST00000304494 SIL1Q9H173 461 aa32.94■■■□□ 2.86
CDKN2A-201ENST00000304494 TNNQ9UQP3 1299 aa32.94■■■□□ 2.86
CDKN2A-201ENST00000304494 THSD7BQ9C0I4 1608 aa32.93■■■□□ 2.86
CDKN2A-201ENST00000304494 FRAT2O75474 233 aaPredicted RBP32.93■■■□□ 2.86
CDKN2A-201ENST00000304494 SLC5A1P13866 664 aa32.93■■■□□ 2.86
CDKN2A-201ENST00000304494 MFSD14BQ5SR56 506 aa32.93■■■□□ 2.86
CDKN2A-201ENST00000304494 APOBEC3FQ8IUX4 373 aaKnown RBP32.93■■■□□ 2.86
CDKN2A-201ENST00000304494 LPIN2Q92539 896 aa32.93■■■□□ 2.86
CDKN2A-201ENST00000304494 COPRSQ9NQ92 184 aa32.92■■■□□ 2.86
CDKN2A-201ENST00000304494 WBP1LQ9NX94 342 aa32.92■■■□□ 2.86
CDKN2A-201ENST00000304494 MAP2K2P36507 400 aa32.91■■■□□ 2.86
CDKN2A-201ENST00000304494 IL15P40933 162 aaPredicted RBP32.91■■■□□ 2.86
CDKN2A-201ENST00000304494 CEP126Q9P2H0 1117 aa32.91■■■□□ 2.86
CDKN2A-201ENST00000304494 SRGAP3O43295 1099 aa32.9■■■□□ 2.86
CDKN2A-201ENST00000304494 GNAI2P04899 355 aa32.9■■■□□ 2.86
CDKN2A-201ENST00000304494 FKBP1BP68106 108 aa32.9■■■□□ 2.86
CDKN2A-201ENST00000304494 MTX1Q13505 466 aa32.9■■■□□ 2.86
CDKN2A-201ENST00000304494 MYO1BO43795 1136 aa32.89■■■□□ 2.86
CDKN2A-201ENST00000304494 BCAMP50895 628 aa32.89■■■□□ 2.86
CDKN2A-201ENST00000304494 CFAP100Q494V2 611 aa32.89■■■□□ 2.86
CDKN2A-201ENST00000304494 FTSJ3Q8IY81 847 aaKnown RBP32.89■■■□□ 2.86
CDKN2A-201ENST00000304494 TMEM57Q8N5G2 664 aa32.89■■■□□ 2.86
CDKN2A-201ENST00000304494 TBC1D22AQ8WUA7 517 aa32.89■■■□□ 2.86
CDKN2A-201ENST00000304494 SCAF8Q9UPN6 1271 aaKnown RBP32.89■■■□□ 2.86
CDKN2A-201ENST00000304494 IQSEC3Q9UPP2 1182 aaPredicted RBP32.89■■■□□ 2.86
CDKN2A-201ENST00000304494 RGMBQ6NW40 437 aa32.88■■■□□ 2.85
CDKN2A-201ENST00000304494 PA2G4Q9UQ80 394 aaKnown RBP32.88■■■□□ 2.85
CDKN2A-201ENST00000304494 FOXN1O15353 648 aa32.87■■■□□ 2.85
CDKN2A-201ENST00000304494 TTF2Q9UNY4 1162 aaKnown RBP32.87■■■□□ 2.85
CDKN2A-201ENST00000304494 ARAP2Q8WZ64 1704 aa32.86■■■□□ 2.85
CDKN2A-201ENST00000304494 SPDYE2BA6NHP3 402 aa32.86■■■□□ 2.85
CDKN2A-201ENST00000304494 SPDYE6P0CI01 402 aa32.86■■■□□ 2.85
CDKN2A-201ENST00000304494 NF2P35240 595 aa32.86■■■□□ 2.85
CDKN2A-201ENST00000304494 RBM5P52756 815 aaKnown RBP eCLIP32.86■■■□□ 2.85
CDKN2A-201ENST00000304494 CHAF1AQ13111 956 aaPredicted RBP32.86■■■□□ 2.85
CDKN2A-201ENST00000304494 ATP2B3Q16720 1220 aa32.86■■■□□ 2.85
CDKN2A-201ENST00000304494 SERPINA10Q9UK55 444 aa32.86■■■□□ 2.85
CDKN2A-201ENST00000304494 COL1A1P02452 1464 aaPredicted RBP32.86■■■□□ 2.85
CDKN2A-201ENST00000304494 AOC2O75106 756 aa32.85■■■□□ 2.85
CDKN2A-201ENST00000304494 NOGQ13253 232 aa32.85■■■□□ 2.85
CDKN2A-201ENST00000304494 DZIP1LQ8IYY4 767 aaKnown RBP32.85■■■□□ 2.85
CDKN2A-201ENST00000304494 BEGAINQ9BUH8 593 aa32.85■■■□□ 2.85
CDKN2A-201ENST00000304494 PAPPA2Q9BXP8 1791 aa32.84■■■□□ 2.85
CDKN2A-201ENST00000304494 CTCFP49711 727 aaPredicted RBP32.84■■■□□ 2.85
CDKN2A-201ENST00000304494 CCDC102AQ96A19 550 aa32.84■■■□□ 2.85
CDKN2A-201ENST00000304494 ZNF157P51786 506 aaPredicted RBP32.83■■■□□ 2.85
CDKN2A-201ENST00000304494 COL13A1Q5TAT6 717 aaPredicted RBP32.83■■■□□ 2.85
CDKN2A-201ENST00000304494 PRAMEF18Q5VWM3 479 aa32.83■■■□□ 2.85
CDKN2A-201ENST00000304494 PRMT6Q96LA8 375 aaPredicted RBP32.83■■■□□ 2.85
CDKN2A-201ENST00000304494 PCDHAC2Q9Y5I4 1007 aa32.82■■■□□ 2.84
CDKN2A-201ENST00000304494 PPP2R3BQ9Y5P8 575 aa32.82■■■□□ 2.84
CDKN2A-201ENST00000304494 DEFB129Q9H1M3 183 aa32.81■■■□□ 2.84
CDKN2A-201ENST00000304494 GNL3LQ9NVN8 582 aaKnown RBP32.81■■■□□ 2.84
CDKN2A-201ENST00000304494 ECM29Q5VYK3 1845 aa32.81■■■□□ 2.84
CDKN2A-201ENST00000304494 ITPRIPQ8IWB1 547 aa32.8■■■□□ 2.84
CDKN2A-201ENST00000304494 SUGT1Q9Y2Z0 365 aa32.8■■■□□ 2.84
CDKN2A-201ENST00000304494 CLRN2A0PK11 232 aa32.78■■■□□ 2.84
CDKN2A-201ENST00000304494 FAM155AB1AL88 458 aaPredicted RBP32.78■■■□□ 2.84
CDKN2A-201ENST00000304494 CRKP46108 304 aa32.78■■■□□ 2.84
CDKN2A-201ENST00000304494 HDLBPQ00341 1268 aaKnown RBP32.78■■■□□ 2.84
CDKN2A-201ENST00000304494 TTLL12Q14166 644 aaPredicted RBP32.78■■■□□ 2.84
CDKN2A-201ENST00000304494 WDR66Q8TBY9 1149 aa32.78■■■□□ 2.84
CDKN2A-201ENST00000304494 VEZTQ9HBM0 779 aa32.78■■■□□ 2.84
CDKN2A-201ENST00000304494 PRDM10Q9NQV6 1147 aa32.78■■■□□ 2.84
CDKN2A-201ENST00000304494 AKAP2Q9Y2D5 859 aa32.78■■■□□ 2.84
CDKN2A-201ENST00000304494 MAST3O60307 1309 aa32.77■■■□□ 2.84
CDKN2A-201ENST00000304494 PNMA6EA0A0J9YXQ4 647 aa32.76■■■□□ 2.83
CDKN2A-201ENST00000304494 SLC10A3P09131 477 aa32.76■■■□□ 2.83
CDKN2A-201ENST00000304494 SEMA3EO15041 775 aa32.75■■■□□ 2.83
CDKN2A-201ENST00000304494 CA12O43570 354 aa32.75■■■□□ 2.83
CDKN2A-201ENST00000304494 RLBP1P12271 317 aa32.75■■■□□ 2.83
CDKN2A-201ENST00000304494 TNFAIP1Q13829 316 aa32.75■■■□□ 2.83
CDKN2A-201ENST00000304494 GRIK5Q16478 980 aa32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms