RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 SPEF2Q9C093 1822 aa21.94■■□□□ 1.1
RNF139-201ENST00000303545 CRKLP46109 303 aaKnown RBP21.94■■□□□ 1.1
RNF139-201ENST00000303545 HS1BP3Q53T59 392 aa21.94■■□□□ 1.1
RNF139-201ENST00000303545 INTS5Q6P9B9 1019 aaKnown RBP21.94■■□□□ 1.1
RNF139-201ENST00000303545 ZNF34Q8IZ26 560 aa21.94■■□□□ 1.1
RNF139-201ENST00000303545 AKAP11Q9UKA4 1901 aa21.94■■□□□ 1.1
RNF139-201ENST00000303545 TNMDQ9H2S6 317 aa21.93■■□□□ 1.1
RNF139-201ENST00000303545 GJB4Q9NTQ9 266 aa21.93■■□□□ 1.1
RNF139-201ENST00000303545 CTNNA3Q9UI47 895 aa21.93■■□□□ 1.1
RNF139-201ENST00000303545 ZNF213O14771 459 aa21.93■■□□□ 1.1
RNF139-201ENST00000303545 KCNQ4P56696 695 aa21.93■■□□□ 1.1
RNF139-201ENST00000303545 MAP3K11Q16584 847 aa21.93■■□□□ 1.1
RNF139-201ENST00000303545 LLPHQ9BRT6 129 aaKnown RBP21.93■■□□□ 1.1
RNF139-201ENST00000303545 INCENPQ9NQS7 918 aa21.93■■□□□ 1.1
RNF139-201ENST00000303545 KLF18A0A0U1RQI7 1052 aa21.93■■□□□ 1.1
RNF139-201ENST00000303545 PDIA4P13667 645 aaKnown RBP21.93■■□□□ 1.1
RNF139-201ENST00000303545 ANTXR2P58335 489 aa21.93■■□□□ 1.1
RNF139-201ENST00000303545 ZNF532Q9HCE3 1301 aa21.93■■□□□ 1.1
RNF139-201ENST00000303545 ANKRD36CQ5JPF3 1778 aa21.92■■□□□ 1.1
RNF139-201ENST00000303545 ADD2P35612 726 aa21.92■■□□□ 1.1
RNF139-201ENST00000303545 MARCH10Q8NA82 808 aaPredicted RBP21.92■■□□□ 1.1
RNF139-201ENST00000303545 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.92■■□□□ 1.1
RNF139-201ENST00000303545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.92■■□□□ 1.1
RNF139-201ENST00000303545 CCDC192P0DO97 292 aa21.92■■□□□ 1.1
RNF139-201ENST00000303545 FDPSP14324 419 aaKnown RBP21.92■■□□□ 1.1
RNF139-201ENST00000303545 ITPK1Q13572 414 aa21.92■■□□□ 1.1
RNF139-201ENST00000303545 SMIM5Q71RC9 77 aa21.92■■□□□ 1.1
RNF139-201ENST00000303545 MYH7P12883 1935 aa21.91■■□□□ 1.1
RNF139-201ENST00000303545 GOLGA8BA8MQT2 603 aa21.91■■□□□ 1.1
RNF139-201ENST00000303545 ERVV-1B6SEH8 477 aa21.91■■□□□ 1.1
RNF139-201ENST00000303545 RXRAP19793 462 aa21.91■■□□□ 1.1
RNF139-201ENST00000303545 UVSSAQ2YD98 709 aa21.91■■□□□ 1.1
RNF139-201ENST00000303545 RALYLQ86SE5 291 aaKnown RBP21.91■■□□□ 1.1
RNF139-201ENST00000303545 NBPF3Q9H094 633 aa21.91■■□□□ 1.1
RNF139-201ENST00000303545 CCDC87Q9NVE4 849 aa21.91■■□□□ 1.1
RNF139-201ENST00000303545 KCNQ2O43526 872 aa21.91■■□□□ 1.1
RNF139-201ENST00000303545 ADD1P35611 737 aaKnown RBP21.91■■□□□ 1.1
RNF139-201ENST00000303545 EIF5P55010 431 aaKnown RBP21.91■■□□□ 1.1
RNF139-201ENST00000303545 MB21D2Q8IYB1 491 aaPredicted RBP21.91■■□□□ 1.1
RNF139-201ENST00000303545 ZNF274Q96GC6 653 aaPredicted RBP21.91■■□□□ 1.1
RNF139-201ENST00000303545 TYRO3Q06418 890 aa21.9■■□□□ 1.1
RNF139-201ENST00000303545 STK11IPQ8N1F8 1099 aa21.9■■□□□ 1.1
RNF139-201ENST00000303545 USP28Q96RU2 1077 aa21.9■■□□□ 1.1
RNF139-201ENST00000303545 ZSCAN16Q9H4T2 348 aaPredicted RBP21.9■■□□□ 1.1
RNF139-201ENST00000303545 MRVI1Q9Y6F6 885 aa21.9■■□□□ 1.1
RNF139-201ENST00000303545 MCM5P33992 734 aa21.9■■□□□ 1.1
RNF139-201ENST00000303545 HMGN5P82970 282 aaKnown RBP21.9■■□□□ 1.1
RNF139-201ENST00000303545 LUZP1Q86V48 1076 aa21.9■■□□□ 1.1
RNF139-201ENST00000303545 TBC1D10CQ8IV04 446 aa21.9■■□□□ 1.1
RNF139-201ENST00000303545 CARMIL3Q8ND23 1372 aa21.89■■□□□ 1.1
RNF139-201ENST00000303545 LOC102724428A0A0B4J2F2 783 aa21.89■■□□□ 1.09
RNF139-201ENST00000303545 PDE6AP16499 860 aa21.89■■□□□ 1.09
RNF139-201ENST00000303545 SIK1P57059 783 aa21.89■■□□□ 1.09
RNF139-201ENST00000303545 NCOA7Q8NI08 942 aa21.89■■□□□ 1.09
RNF139-201ENST00000303545 MPHOSPH8Q99549 860 aa21.89■■□□□ 1.09
RNF139-201ENST00000303545 TTC12Q9H892 705 aaPredicted RBP21.89■■□□□ 1.09
RNF139-201ENST00000303545 IQSEC3Q9UPP2 1182 aaPredicted RBP21.89■■□□□ 1.09
RNF139-201ENST00000303545 SPATA31A1Q5TZJ5 1347 aa21.89■■□□□ 1.09
RNF139-201ENST00000303545 SALL1Q9NSC2 1324 aa21.89■■□□□ 1.09
RNF139-201ENST00000303545 PUM3Q15397 648 aaKnown RBP21.89■■□□□ 1.09
RNF139-201ENST00000303545 ILDR1Q86SU0 546 aaPredicted RBP21.89■■□□□ 1.09
RNF139-201ENST00000303545 SPC24Q8NBT2 197 aa21.88■■□□□ 1.09
RNF139-201ENST00000303545 HPS5Q9UPZ3 1129 aa21.88■■□□□ 1.09
RNF139-201ENST00000303545 NIP7Q9Y221 180 aaKnown RBP eCLIP21.88■■□□□ 1.09
RNF139-201ENST00000303545 A0A087WWV3 80 aa21.88■■□□□ 1.09
RNF139-201ENST00000303545 ANO6Q4KMQ2 910 aa21.88■■□□□ 1.09
RNF139-201ENST00000303545 NAA16Q6N069 864 aaPredicted RBP21.88■■□□□ 1.09
RNF139-201ENST00000303545 CCDC144CPQ8IYA2 1237 aa21.88■■□□□ 1.09
RNF139-201ENST00000303545 UTP14AQ9BVJ6 771 aaKnown RBP21.88■■□□□ 1.09
RNF139-201ENST00000303545 SENP2Q9HC62 589 aa21.88■■□□□ 1.09
RNF139-201ENST00000303545 CFAP45Q9UL16 551 aa21.88■■□□□ 1.09
RNF139-201ENST00000303545 POLR3DP05423 398 aaPredicted RBP21.87■■□□□ 1.09
RNF139-201ENST00000303545 CYB5R4Q7L1T6 521 aa21.87■■□□□ 1.09
RNF139-201ENST00000303545 C17orf53Q8N3J3 647 aaPredicted RBP21.87■■□□□ 1.09
RNF139-201ENST00000303545 LPIN2Q92539 896 aa21.87■■□□□ 1.09
RNF139-201ENST00000303545 BCAMP50895 628 aa21.87■■□□□ 1.09
RNF139-201ENST00000303545 RASGRF1Q13972 1273 aa21.87■■□□□ 1.09
RNF139-201ENST00000303545 TICAM2Q86XR7 235 aa21.87■■□□□ 1.09
RNF139-201ENST00000303545 MAGEB6Q8N7X4 407 aa21.87■■□□□ 1.09
RNF139-201ENST00000303545 CLSTN2Q9H4D0 955 aa21.87■■□□□ 1.09
RNF139-201ENST00000303545 WTIPA6NIX2 430 aaPredicted RBP21.86■■□□□ 1.09
RNF139-201ENST00000303545 PIP4K2BP78356 416 aa21.86■■□□□ 1.09
RNF139-201ENST00000303545 GOLPH3LQ9H4A5 285 aa21.86■■□□□ 1.09
RNF139-201ENST00000303545 B4E1Z4 1266 aa21.86■■□□□ 1.09
RNF139-201ENST00000303545 CAMTA2O94983 1202 aa21.86■■□□□ 1.09
RNF139-201ENST00000303545 TTF1Q15361 905 aaPredicted RBP21.86■■□□□ 1.09
RNF139-201ENST00000303545 ZSCAN25Q6NSZ9 544 aa21.86■■□□□ 1.09
RNF139-201ENST00000303545 CCAR1Q8IX12 1150 aaKnown RBP21.86■■□□□ 1.09
RNF139-201ENST00000303545 SPATA5Q8NB90 893 aa21.86■■□□□ 1.09
RNF139-201ENST00000303545 AIDAQ96BJ3 306 aa21.86■■□□□ 1.09
RNF139-201ENST00000303545 R3HCC1Q9Y3T6 440 aaKnown RBP21.86■■□□□ 1.09
RNF139-201ENST00000303545 ZNF500O60304 480 aaPredicted RBP21.85■■□□□ 1.09
RNF139-201ENST00000303545 OFD1O75665 1012 aa21.85■■□□□ 1.09
RNF139-201ENST00000303545 FGFR2P21802 821 aa21.85■■□□□ 1.09
RNF139-201ENST00000303545 ERCC4Q92889 916 aaPredicted RBP21.85■■□□□ 1.09
RNF139-201ENST00000303545 CPLX1O14810 134 aa21.85■■□□□ 1.09
RNF139-201ENST00000303545 ARID4AP29374 1257 aaPredicted RBP21.85■■□□□ 1.09
RNF139-201ENST00000303545 CTDSPL2Q05D32 466 aa21.85■■□□□ 1.09
RNF139-201ENST00000303545 ARMT1Q9H993 441 aa21.85■■□□□ 1.09
RNF139-201ENST00000303545 DDX19AQ9NUU7 478 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms