RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 MYH7P12883 1935 aa23.24■■□□□ 1.31
NFIL3-201ENST00000297689 IL6STP40189 918 aaPredicted RBP23.24■■□□□ 1.31
NFIL3-201ENST00000297689 KIAA2012Q0VF49 1180 aa23.24■■□□□ 1.31
NFIL3-201ENST00000297689 GORABQ5T7V8 394 aa23.24■■□□□ 1.31
NFIL3-201ENST00000297689 PUS7LQ9H0K6 701 aaKnown RBP23.24■■□□□ 1.31
NFIL3-201ENST00000297689 NCOA5Q9HCD5 579 aaKnown RBP23.24■■□□□ 1.31
NFIL3-201ENST00000297689 FDPSP14324 419 aaKnown RBP23.23■■□□□ 1.31
NFIL3-201ENST00000297689 CCT2P78371 535 aaKnown RBP23.23■■□□□ 1.31
NFIL3-201ENST00000297689 INTS5Q6P9B9 1019 aaKnown RBP23.23■■□□□ 1.31
NFIL3-201ENST00000297689 PIBF1Q8WXW3 757 aa23.23■■□□□ 1.31
NFIL3-201ENST00000297689 CHMP4CQ96CF2 233 aa23.23■■□□□ 1.31
NFIL3-201ENST00000297689 CCDC85AQ96PX6 553 aaPredicted RBP23.23■■□□□ 1.31
NFIL3-201ENST00000297689 TBC1D2BQ9UPU7 963 aa23.23■■□□□ 1.31
NFIL3-201ENST00000297689 KIF3AQ9Y496 699 aa23.23■■□□□ 1.31
NFIL3-201ENST00000297689 HSP90AB3PQ58FF7 597 aa23.23■■□□□ 1.31
NFIL3-201ENST00000297689 MB21D2Q8IYB1 491 aaPredicted RBP23.23■■□□□ 1.31
NFIL3-201ENST00000297689 GREM2Q9H772 168 aa23.23■■□□□ 1.31
NFIL3-201ENST00000297689 RREB1Q92766 1687 aa23.22■■□□□ 1.31
NFIL3-201ENST00000297689 ITGA6P23229 1130 aa23.22■■□□□ 1.31
NFIL3-201ENST00000297689 VPS72Q15906 364 aa23.22■■□□□ 1.31
NFIL3-201ENST00000297689 ATP2B3Q16720 1220 aa23.22■■□□□ 1.31
NFIL3-201ENST00000297689 CHST3Q7LGC8 479 aa23.22■■□□□ 1.31
NFIL3-201ENST00000297689 R3HCC1Q9Y3T6 440 aaKnown RBP23.22■■□□□ 1.31
NFIL3-201ENST00000297689 MYH3P11055 1940 aa23.22■■□□□ 1.31
NFIL3-201ENST00000297689 MCAMP43121 646 aa23.21■■□□□ 1.31
NFIL3-201ENST00000297689 CTSWP56202 376 aa23.21■■□□□ 1.31
NFIL3-201ENST00000297689 PI16Q6UXB8 463 aa23.21■■□□□ 1.31
NFIL3-201ENST00000297689 DZIP3Q86Y13 1208 aaKnown RBP23.21■■□□□ 1.31
NFIL3-201ENST00000297689 CKAP2LQ8IYA6 745 aa23.21■■□□□ 1.31
NFIL3-201ENST00000297689 ZNF830Q96NB3 372 aaPredicted RBP23.21■■□□□ 1.31
NFIL3-201ENST00000297689 ERVV-1B6SEH8 477 aa23.21■■□□□ 1.31
NFIL3-201ENST00000297689 IMMTQ16891 758 aaKnown RBP23.21■■□□□ 1.31
NFIL3-201ENST00000297689 TAF7LQ5H9L4 462 aa23.21■■□□□ 1.31
NFIL3-201ENST00000297689 FBXO41Q8TF61 875 aa23.21■■□□□ 1.31
NFIL3-201ENST00000297689 TTC12Q9H892 705 aaPredicted RBP23.21■■□□□ 1.31
NFIL3-201ENST00000297689 GPHNQ9NQX3 736 aaPredicted RBP23.21■■□□□ 1.31
NFIL3-201ENST00000297689 A0A0G2JS52 829 aa23.2■■□□□ 1.3
NFIL3-201ENST00000297689 EIF5P55010 431 aaKnown RBP23.2■■□□□ 1.3
NFIL3-201ENST00000297689 WASHC4Q2M389 1173 aa23.2■■□□□ 1.3
NFIL3-201ENST00000297689 LDHAL6AQ6ZMR3 332 aa23.2■■□□□ 1.3
NFIL3-201ENST00000297689 CBX8Q9HC52 389 aa23.2■■□□□ 1.3
NFIL3-201ENST00000297689 WDR19Q8NEZ3 1342 aa23.2■■□□□ 1.3
NFIL3-201ENST00000297689 CARMIL3Q8ND23 1372 aa23.2■■□□□ 1.3
NFIL3-201ENST00000297689 ATRNO75882 1429 aa23.2■■□□□ 1.3
NFIL3-201ENST00000297689 CICQ96RK0 1608 aaPredicted RBP23.2■■□□□ 1.3
NFIL3-201ENST00000297689 ANTXR2P58335 489 aa23.2■■□□□ 1.3
NFIL3-201ENST00000297689 ITPK1Q13572 414 aa23.2■■□□□ 1.3
NFIL3-201ENST00000297689 MPNDQ8N594 471 aa23.2■■□□□ 1.3
NFIL3-201ENST00000297689 BICD2Q8TD16 824 aa23.2■■□□□ 1.3
NFIL3-201ENST00000297689 UBN2Q6ZU65 1347 aa23.2■■□□□ 1.3
NFIL3-201ENST00000297689 METTL24Q5JXM2 366 aa23.19■■□□□ 1.3
NFIL3-201ENST00000297689 ZNF34Q8IZ26 560 aa23.19■■□□□ 1.3
NFIL3-201ENST00000297689 USP28Q96RU2 1077 aa23.19■■□□□ 1.3
NFIL3-201ENST00000297689 SPTLC3Q9NUV7 552 aa23.19■■□□□ 1.3
NFIL3-201ENST00000297689 HPS5Q9UPZ3 1129 aa23.19■■□□□ 1.3
NFIL3-201ENST00000297689 GPAA1O43292 621 aa23.18■■□□□ 1.3
NFIL3-201ENST00000297689 ADD2P35612 726 aa23.18■■□□□ 1.3
NFIL3-201ENST00000297689 ATP6V1AP38606 617 aa23.18■■□□□ 1.3
NFIL3-201ENST00000297689 ANO6Q4KMQ2 910 aa23.18■■□□□ 1.3
NFIL3-201ENST00000297689 LUZP1Q86V48 1076 aa23.18■■□□□ 1.3
NFIL3-201ENST00000297689 CCDC87Q9NVE4 849 aa23.18■■□□□ 1.3
NFIL3-201ENST00000297689 MYH14Q7Z406 1995 aaKnown RBP23.18■■□□□ 1.3
NFIL3-201ENST00000297689 LRP5O75197 1615 aa23.18■■□□□ 1.3
NFIL3-201ENST00000297689 LOC102724428A0A0B4J2F2 783 aa23.18■■□□□ 1.3
NFIL3-201ENST00000297689 ANKRD18BA2A2Z9 1011 aa23.18■■□□□ 1.3
NFIL3-201ENST00000297689 SIK1P57059 783 aa23.18■■□□□ 1.3
NFIL3-201ENST00000297689 TDRD7Q8NHU6 1098 aaKnown RBP23.18■■□□□ 1.3
NFIL3-201ENST00000297689 FTOQ9C0B1 505 aaKnown RBP eCLIP23.18■■□□□ 1.3
NFIL3-201ENST00000297689 USP21Q9UK80 565 aa23.18■■□□□ 1.3
NFIL3-201ENST00000297689 IRS4O14654 1257 aaPredicted RBP23.17■■□□□ 1.3
NFIL3-201ENST00000297689 KCNQ2O43526 872 aa23.17■■□□□ 1.3
NFIL3-201ENST00000297689 CRKLP46109 303 aaKnown RBP23.17■■□□□ 1.3
NFIL3-201ENST00000297689 HAND2P61296 217 aa23.17■■□□□ 1.3
NFIL3-201ENST00000297689 SNW1Q13573 536 aaKnown RBP23.17■■□□□ 1.3
NFIL3-201ENST00000297689 ENGASEQ8NFI3 743 aa23.17■■□□□ 1.3
NFIL3-201ENST00000297689 PDE8BO95263 885 aa23.17■■□□□ 1.3
NFIL3-201ENST00000297689 NOLC1Q14978 699 aaKnown RBP eCLIP23.17■■□□□ 1.3
NFIL3-201ENST00000297689 NBPF3Q9H094 633 aa23.17■■□□□ 1.3
NFIL3-201ENST00000297689 KCNF1Q9H3M0 494 aa23.17■■□□□ 1.3
NFIL3-201ENST00000297689 PRC1O43663 620 aa23.16■■□□□ 1.3
NFIL3-201ENST00000297689 PDE8AO60658 829 aa23.16■■□□□ 1.3
NFIL3-201ENST00000297689 TPM3P06753 285 aa23.16■■□□□ 1.3
NFIL3-201ENST00000297689 ZNF396Q96N95 335 aaPredicted RBP23.16■■□□□ 1.3
NFIL3-201ENST00000297689 TRMT112Q9UI30 125 aaKnown RBP23.16■■□□□ 1.3
NFIL3-201ENST00000297689 CAVIN2O95810 425 aa23.15■■□□□ 1.3
NFIL3-201ENST00000297689 ARID4AP29374 1257 aaPredicted RBP23.15■■□□□ 1.3
NFIL3-201ENST00000297689 RGS22Q8NE09 1264 aa23.15■■□□□ 1.3
NFIL3-201ENST00000297689 NCOA7Q8NI08 942 aa23.15■■□□□ 1.3
NFIL3-201ENST00000297689 GOLPH3LQ9H4A5 285 aa23.15■■□□□ 1.3
NFIL3-201ENST00000297689 RRP9O43818 475 aaKnown RBP23.15■■□□□ 1.3
NFIL3-201ENST00000297689 FGFR2P21802 821 aa23.15■■□□□ 1.3
NFIL3-201ENST00000297689 UBE3CQ15386 1083 aa23.15■■□□□ 1.3
NFIL3-201ENST00000297689 FAM98CQ17RN3 349 aaKnown RBP23.15■■□□□ 1.3
NFIL3-201ENST00000297689 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.15■■□□□ 1.3
NFIL3-201ENST00000297689 TTF1Q15361 905 aaPredicted RBP23.14■■□□□ 1.29
NFIL3-201ENST00000297689 ZSCAN25Q6NSZ9 544 aa23.14■■□□□ 1.29
NFIL3-201ENST00000297689 SASS6Q6UVJ0 657 aa23.14■■□□□ 1.29
NFIL3-201ENST00000297689 MYO5AQ9Y4I1 1855 aaKnown RBP23.14■■□□□ 1.29
NFIL3-201ENST00000297689 ZNF213O14771 459 aa23.13■■□□□ 1.29
NFIL3-201ENST00000297689 CTAGE5O15320 804 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms