RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 KIAA1551Q9HCM1 1747 aa10.95□□□□□ -0.66
PRDM9-201ENST00000296682 MAP3K15Q6ZN16 1313 aa10.95□□□□□ -0.66
PRDM9-201ENST00000296682 TCHHQ07283 1943 aa10.95□□□□□ -0.66
PRDM9-201ENST00000296682 E7EWF7 191 aa10.95□□□□□ -0.66
PRDM9-201ENST00000296682 GPAA1O43292 621 aa10.95□□□□□ -0.66
PRDM9-201ENST00000296682 TDO2P48775 406 aa10.95□□□□□ -0.66
PRDM9-201ENST00000296682 TOB2Q14106 344 aaPredicted RBP10.95□□□□□ -0.66
PRDM9-201ENST00000296682 ISM2Q6H9L7 571 aa10.95□□□□□ -0.66
PRDM9-201ENST00000296682 STOX1Q6ZVD7 989 aa10.95□□□□□ -0.66
PRDM9-201ENST00000296682 DHX32Q7L7V1 743 aaKnown RBP10.95□□□□□ -0.66
PRDM9-201ENST00000296682 TTLL11Q8NHH1 800 aa10.95□□□□□ -0.66
PRDM9-201ENST00000296682 TNMDQ9H2S6 317 aa10.95□□□□□ -0.66
PRDM9-201ENST00000296682 MAST3O60307 1309 aa10.95□□□□□ -0.66
PRDM9-201ENST00000296682 FGAP02671 866 aa10.95□□□□□ -0.66
PRDM9-201ENST00000296682 MAGEB6Q8N7X4 407 aa10.95□□□□□ -0.66
PRDM9-201ENST00000296682 SLC4A9Q96Q91 983 aa10.95□□□□□ -0.66
PRDM9-201ENST00000296682 HMG20BQ9P0W2 317 aa10.95□□□□□ -0.66
PRDM9-201ENST00000296682 BCAMP50895 628 aa10.94□□□□□ -0.66
PRDM9-201ENST00000296682 UBE2HP62256 183 aa10.94□□□□□ -0.66
PRDM9-201ENST00000296682 DENND2AQ9ULE3 1009 aa10.94□□□□□ -0.66
PRDM9-201ENST00000296682 PTPDC1A2A3K4 754 aa10.94□□□□□ -0.66
PRDM9-201ENST00000296682 PRC1O43663 620 aa10.94□□□□□ -0.66
PRDM9-201ENST00000296682 CRKLP46109 303 aaKnown RBP10.94□□□□□ -0.66
PRDM9-201ENST00000296682 CTSWP56202 376 aa10.94□□□□□ -0.66
PRDM9-201ENST00000296682 SUSD4Q5VX71 490 aa10.94□□□□□ -0.66
PRDM9-201ENST00000296682 TTC6Q86TZ1 520 aa10.94□□□□□ -0.66
PRDM9-201ENST00000296682 SDF4Q9BRK5 362 aa10.94□□□□□ -0.66
PRDM9-201ENST00000296682 R3HCC1Q9Y3T6 440 aaKnown RBP10.94□□□□□ -0.66
PRDM9-201ENST00000296682 LOC102724428A0A0B4J2F2 783 aa10.94□□□□□ -0.66
PRDM9-201ENST00000296682 B4E1Z4 1266 aa10.94□□□□□ -0.66
PRDM9-201ENST00000296682 PCCAP05165 728 aaPredicted RBP10.94□□□□□ -0.66
PRDM9-201ENST00000296682 LIG1P18858 919 aa10.94□□□□□ -0.66
PRDM9-201ENST00000296682 SIK1P57059 783 aa10.94□□□□□ -0.66
PRDM9-201ENST00000296682 SCRN1Q12765 414 aa10.94□□□□□ -0.66
PRDM9-201ENST00000296682 WTIPA6NIX2 430 aaPredicted RBP10.93□□□□□ -0.66
PRDM9-201ENST00000296682 CYP19A1P11511 503 aaPredicted RBP10.93□□□□□ -0.66
PRDM9-201ENST00000296682 CCDC183Q5T5S1 534 aa10.93□□□□□ -0.66
PRDM9-201ENST00000296682 USPL1Q5W0Q7 1092 aa10.93□□□□□ -0.66
PRDM9-201ENST00000296682 CMTR1Q8N1G2 835 aaKnown RBP10.93□□□□□ -0.66
PRDM9-201ENST00000296682 NAPBQ9H115 298 aa10.93□□□□□ -0.66
PRDM9-201ENST00000296682 NUP62CLQ9H1M0 184 aa10.93□□□□□ -0.66
PRDM9-201ENST00000296682 ARMT1Q9H993 441 aa10.93□□□□□ -0.66
PRDM9-201ENST00000296682 CCDC102BQ68D86 513 aa10.93□□□□□ -0.66
PRDM9-201ENST00000296682 UTP14AQ9BVJ6 771 aaKnown RBP10.93□□□□□ -0.66
PRDM9-201ENST00000296682 CTNNA3Q9UI47 895 aa10.93□□□□□ -0.66
PRDM9-201ENST00000296682 CTDSPL2Q05D32 466 aa10.93□□□□□ -0.66
PRDM9-201ENST00000296682 SASS6Q6UVJ0 657 aa10.93□□□□□ -0.66
PRDM9-201ENST00000296682 PPP1R9BQ96SB3 815 aa10.93□□□□□ -0.66
PRDM9-201ENST00000296682 ISCA1Q9BUE6 129 aa10.93□□□□□ -0.66
PRDM9-201ENST00000296682 ORC3Q9UBD5 711 aaPredicted RBP10.93□□□□□ -0.66
PRDM9-201ENST00000296682 SH3TC1Q8TE82 1336 aa10.92□□□□□ -0.66
PRDM9-201ENST00000296682 ZNF532Q9HCE3 1301 aa10.92□□□□□ -0.66
PRDM9-201ENST00000296682 MCAMP43121 646 aa10.92□□□□□ -0.66
PRDM9-201ENST00000296682 SYNE3Q6ZMZ3 975 aa10.92□□□□□ -0.66
PRDM9-201ENST00000296682 C17orf53Q8N3J3 647 aaPredicted RBP10.92□□□□□ -0.66
PRDM9-201ENST00000296682 WWC3Q9ULE0 1092 aa10.92□□□□□ -0.66
PRDM9-201ENST00000296682 KIF3AQ9Y496 699 aa10.92□□□□□ -0.66
PRDM9-201ENST00000296682 ZNF609O15014 1411 aa10.92□□□□□ -0.66
PRDM9-201ENST00000296682 C4AP0C0L4 1744 aa10.92□□□□□ -0.66
PRDM9-201ENST00000296682 C4BP0C0L5 1744 aa10.92□□□□□ -0.66
PRDM9-201ENST00000296682 PDE8AO60658 829 aa10.92□□□□□ -0.66
PRDM9-201ENST00000296682 GYG1P46976 350 aa10.92□□□□□ -0.66
PRDM9-201ENST00000296682 ST3GAL1Q11201 340 aa10.92□□□□□ -0.66
PRDM9-201ENST00000296682 TTC12Q9H892 705 aaPredicted RBP10.92□□□□□ -0.66
PRDM9-201ENST00000296682 CCDC87Q9NVE4 849 aa10.92□□□□□ -0.66
PRDM9-201ENST00000296682 BIN1O00499 593 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 PRDM1O75626 825 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 MBD4O95243 580 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 SLC5A1P13866 664 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 STK38Q15208 465 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 ECM29Q5VYK3 1845 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 DOT1LQ8TEK3 1739 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 PRKAB2O43741 272 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 KIAA2012Q0VF49 1180 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 ZMYM1Q5SVZ6 1142 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 PTF1AQ7RTS3 328 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 PHKBQ93100 1093 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 C8orf76Q96K31 380 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 TFCP2L1Q9NZI6 479 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 ADD1P35611 737 aaKnown RBP10.91□□□□□ -0.66
PRDM9-201ENST00000296682 CCDC73Q6ZRK6 1079 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 PIH1D3Q9NQM4 214 aaKnown RBP10.91□□□□□ -0.66
PRDM9-201ENST00000296682 HELLSQ9NRZ9 838 aa10.91□□□□□ -0.66
PRDM9-201ENST00000296682 hCG_1642624A0A1W2PR95 340 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 BECN2A8MW95 431 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 IFIT3O14879 490 aaKnown RBP10.9□□□□□ -0.66
PRDM9-201ENST00000296682 PDE8BO95263 885 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 ADCY5O95622 1261 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 MARCKSP29966 332 aaPredicted RBP10.9□□□□□ -0.66
PRDM9-201ENST00000296682 MAP3K12Q12852 859 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 NCOA7Q8NI08 942 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 TRIM5Q9C035 493 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 GPR108Q9NPR9 543 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 TIAM2Q8IVF5 1701 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 PALLDQ8WX93 1383 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 MCM5P33992 734 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 MAP3K11Q16584 847 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 LUZP1Q86V48 1076 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 MARCH10Q8NA82 808 aaPredicted RBP10.9□□□□□ -0.66
PRDM9-201ENST00000296682 GTF3C6Q969F1 213 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms