RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 SSH3Q8TE77 659 aa14.95□□□□□ -0.02
HMGB2-201ENST00000296503 ZC3H15Q8WU90 426 aaKnown RBP14.95□□□□□ -0.02
HMGB2-201ENST00000296503 SURF6O75683 361 aaKnown RBP14.95□□□□□ -0.02
HMGB2-201ENST00000296503 ITGBL1O95965 494 aaPredicted RBP14.95□□□□□ -0.02
HMGB2-201ENST00000296503 EGFRP00533 1210 aa14.95□□□□□ -0.02
HMGB2-201ENST00000296503 ZNF280AP59817 542 aaPredicted RBP14.95□□□□□ -0.02
HMGB2-201ENST00000296503 POLA2Q14181 598 aa14.95□□□□□ -0.02
HMGB2-201ENST00000296503 KIF4BQ2VIQ3 1234 aa14.95□□□□□ -0.02
HMGB2-201ENST00000296503 MYOZ2Q9NPC6 264 aa14.95□□□□□ -0.02
HMGB2-201ENST00000296503 HDAC9Q9UKV0 1011 aa14.95□□□□□ -0.02
HMGB2-201ENST00000296503 AKAP2Q9Y2D5 859 aa14.95□□□□□ -0.02
HMGB2-201ENST00000296503 TIMM10P62072 90 aa14.94□□□□□ -0.02
HMGB2-201ENST00000296503 CHAF1AQ13111 956 aaPredicted RBP14.94□□□□□ -0.02
HMGB2-201ENST00000296503 CEP85Q6P2H3 762 aa14.94□□□□□ -0.02
HMGB2-201ENST00000296503 F8W031 263 aaPredicted RBP14.93□□□□□ -0.02
HMGB2-201ENST00000296503 NEUROD6Q96NK8 337 aa14.93□□□□□ -0.02
HMGB2-201ENST00000296503 ZBTB40Q9NUA8 1239 aa14.93□□□□□ -0.02
HMGB2-201ENST00000296503 PGAP2Q9UHJ9 254 aa14.93□□□□□ -0.02
HMGB2-201ENST00000296503 PSME4Q14997 1843 aa14.93□□□□□ -0.02
HMGB2-201ENST00000296503 HTRA3P83110 453 aa14.93□□□□□ -0.02
HMGB2-201ENST00000296503 SCARF1Q14162 830 aa14.93□□□□□ -0.02
HMGB2-201ENST00000296503 CERS5Q8N5B7 392 aa14.93□□□□□ -0.02
HMGB2-201ENST00000296503 DCPSQ96C86 337 aaKnown RBP14.93□□□□□ -0.02
HMGB2-201ENST00000296503 GNL3LQ9NVN8 582 aaKnown RBP14.93□□□□□ -0.02
HMGB2-201ENST00000296503 FAM205AQ6ZU69 1335 aa14.93□□□□□ -0.02
HMGB2-201ENST00000296503 MMP14P50281 582 aa14.92□□□□□ -0.02
HMGB2-201ENST00000296503 FKBP1AP62942 108 aaKnown RBP14.92□□□□□ -0.02
HMGB2-201ENST00000296503 MFSD14BQ5SR56 506 aa14.92□□□□□ -0.02
HMGB2-201ENST00000296503 CDC37L1Q7L3B6 337 aa14.92□□□□□ -0.02
HMGB2-201ENST00000296503 RPAP2Q8IXW5 612 aaPredicted RBP14.92□□□□□ -0.02
HMGB2-201ENST00000296503 A0A1B0GUL7 405 aa14.91□□□□□ -0.02
HMGB2-201ENST00000296503 ZNF609O15014 1411 aa14.91□□□□□ -0.02
HMGB2-201ENST00000296503 RRP1P56182 461 aaKnown RBP14.91□□□□□ -0.02
HMGB2-201ENST00000296503 USP48Q86UV5 1035 aa14.91□□□□□ -0.02
HMGB2-201ENST00000296503 PASKQ96RG2 1323 aa14.91□□□□□ -0.02
HMGB2-201ENST00000296503 GLIS2Q9BZE0 524 aaPredicted RBP14.91□□□□□ -0.02
HMGB2-201ENST00000296503 ADAMTSL1Q8N6G6 1762 aa14.91□□□□□ -0.02
HMGB2-201ENST00000296503 TRAF5O00463 557 aa14.91□□□□□ -0.02
HMGB2-201ENST00000296503 ADORA1P30542 326 aa14.91□□□□□ -0.02
HMGB2-201ENST00000296503 GORABQ5T7V8 394 aa14.91□□□□□ -0.02
HMGB2-201ENST00000296503 RBM5P52756 815 aaKnown RBP eCLIP14.9□□□□□ -0.02
HMGB2-201ENST00000296503 FMR1Q06787 632 aaKnown RBP eCLIP14.9□□□□□ -0.02
HMGB2-201ENST00000296503 NBPF9Q3BBW0 867 aa14.9□□□□□ -0.02
HMGB2-201ENST00000296503 TBC1D22AQ8WUA7 517 aa14.9□□□□□ -0.02
HMGB2-201ENST00000296503 XAGE2Q96GT9 111 aa14.9□□□□□ -0.02
HMGB2-201ENST00000296503 NOP58Q9Y2X3 529 aaKnown RBP14.9□□□□□ -0.02
HMGB2-201ENST00000296503 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.9□□□□□ -0.02
HMGB2-201ENST00000296503 ASTN2O75129 1339 aaPredicted RBP14.89□□□□□ -0.03
HMGB2-201ENST00000296503 TMEM88BA6NKF7 163 aa14.89□□□□□ -0.03
HMGB2-201ENST00000296503 HMMRO75330 724 aa14.89□□□□□ -0.03
HMGB2-201ENST00000296503 PHKA1P46020 1223 aa14.89□□□□□ -0.03
HMGB2-201ENST00000296503 DLGAP5Q15398 846 aa14.89□□□□□ -0.03
HMGB2-201ENST00000296503 ANGEL2Q5VTE6 544 aaKnown RBP14.89□□□□□ -0.03
HMGB2-201ENST00000296503 KRT26Q7Z3Y9 468 aa14.89□□□□□ -0.03
HMGB2-201ENST00000296503 GGA3Q9NZ52 723 aa14.89□□□□□ -0.03
HMGB2-201ENST00000296503 TTF2Q9UNY4 1162 aaKnown RBP14.89□□□□□ -0.03
HMGB2-201ENST00000296503 WNT10BO00744 389 aa14.89□□□□□ -0.03
HMGB2-201ENST00000296503 CCDC102BQ68D86 513 aa14.89□□□□□ -0.03
HMGB2-201ENST00000296503 SULF1Q8IWU6 871 aa14.89□□□□□ -0.03
HMGB2-201ENST00000296503 ERICH6Q7L0X2 663 aa14.88□□□□□ -0.03
HMGB2-201ENST00000296503 WDR66Q8TBY9 1149 aa14.88□□□□□ -0.03
HMGB2-201ENST00000296503 ZNF408Q9H9D4 720 aa14.88□□□□□ -0.03
HMGB2-201ENST00000296503 CREBZFQ9NS37 354 aa14.88□□□□□ -0.03
HMGB2-201ENST00000296503 PPP4R2Q9NY27 417 aa14.88□□□□□ -0.03
HMGB2-201ENST00000296503 EXOC6BQ9Y2D4 811 aa14.88□□□□□ -0.03
HMGB2-201ENST00000296503 POLR2AP24928 1970 aaKnown RBP14.87□□□□□ -0.03
HMGB2-201ENST00000296503 CFAP100Q494V2 611 aa14.87□□□□□ -0.03
HMGB2-201ENST00000296503 HSP90AB4PQ58FF6 505 aa14.87□□□□□ -0.03
HMGB2-201ENST00000296503 GPR108Q9NPR9 543 aa14.87□□□□□ -0.03
HMGB2-201ENST00000296503 DENND2AQ9ULE3 1009 aa14.87□□□□□ -0.03
HMGB2-201ENST00000296503 CELF2O95319 508 aaKnown RBP14.86□□□□□ -0.03
HMGB2-201ENST00000296503 DLK2Q6UY11 383 aa14.86□□□□□ -0.03
HMGB2-201ENST00000296503 SIRT2Q8IXJ6 389 aa14.86□□□□□ -0.03
HMGB2-201ENST00000296503 ZNF646O15015 1829 aaPredicted RBP14.86□□□□□ -0.03
HMGB2-201ENST00000296503 ADM5C9JUS6 153 aa14.86□□□□□ -0.03
HMGB2-201ENST00000296503 APBB1O00213 710 aa14.86□□□□□ -0.03
HMGB2-201ENST00000296503 SEMA3EO15041 775 aa14.86□□□□□ -0.03
HMGB2-201ENST00000296503 GRIK5Q16478 980 aa14.86□□□□□ -0.03
HMGB2-201ENST00000296503 TNNI3KQ59H18 835 aa14.86□□□□□ -0.03
HMGB2-201ENST00000296503 ERC1Q8IUD2 1116 aa14.86□□□□□ -0.03
HMGB2-201ENST00000296503 SCAF8Q9UPN6 1271 aaKnown RBP14.86□□□□□ -0.03
HMGB2-201ENST00000296503 FPGT-TNNI3KV9GXZ4 949 aa14.86□□□□□ -0.03
HMGB2-201ENST00000296503 MYO1BO43795 1136 aa14.85□□□□□ -0.03
HMGB2-201ENST00000296503 CST9Q5W186 159 aa14.85□□□□□ -0.03
HMGB2-201ENST00000296503 DNAJC5GQ8N7S2 189 aa14.85□□□□□ -0.03
HMGB2-201ENST00000296503 MTMR14Q8NCE2 650 aa14.85□□□□□ -0.03
HMGB2-201ENST00000296503 PRMT6Q96LA8 375 aaPredicted RBP14.85□□□□□ -0.03
HMGB2-201ENST00000296503 ABT1Q9ULW3 272 aaKnown RBP14.85□□□□□ -0.03
HMGB2-201ENST00000296503 PCDHAC2Q9Y5I4 1007 aa14.85□□□□□ -0.03
HMGB2-201ENST00000296503 CCDC158Q5M9N0 1113 aa14.84□□□□□ -0.03
HMGB2-201ENST00000296503 ZBED3Q96IU2 234 aaPredicted RBP14.84□□□□□ -0.03
HMGB2-201ENST00000296503 CCDC8Q9H0W5 538 aaPredicted RBP14.84□□□□□ -0.03
HMGB2-201ENST00000296503 SERPINA10Q9UK55 444 aa14.84□□□□□ -0.03
HMGB2-201ENST00000296503 SUGT1Q9Y2Z0 365 aa14.84□□□□□ -0.03
HMGB2-201ENST00000296503 PITPNM2Q9BZ72 1349 aa14.84□□□□□ -0.03
HMGB2-201ENST00000296503 CRKP46108 304 aa14.84□□□□□ -0.03
HMGB2-201ENST00000296503 TTC39AQ5SRH9 613 aa14.84□□□□□ -0.03
HMGB2-201ENST00000296503 CRBNQ96SW2 442 aa14.84□□□□□ -0.03
HMGB2-201ENST00000296503 MKRN1Q9UHC7 482 aaKnown RBP14.84□□□□□ -0.03
HMGB2-201ENST00000296503 SPDYE2BA6NHP3 402 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms