RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 MICALL2Q8IY33 904 aa33.15■■■□□ 2.9
SSU72-201ENST00000291386 RHPN1Q8TCX5 695 aa33.15■■■□□ 2.9
SSU72-201ENST00000291386 NEUROD6Q96NK8 337 aa33.15■■■□□ 2.9
SSU72-201ENST00000291386 GNL3LQ9NVN8 582 aaKnown RBP33.15■■■□□ 2.9
SSU72-201ENST00000291386 H7C1D1 291 aa33.14■■■□□ 2.9
SSU72-201ENST00000291386 EXOC6Q8TAG9 804 aa33.14■■■□□ 2.9
SSU72-201ENST00000291386 RBM46Q8TBY0 533 aaKnown RBP33.14■■■□□ 2.9
SSU72-201ENST00000291386 KIF1BPQ96EK5 621 aa33.14■■■□□ 2.9
SSU72-201ENST00000291386 MXD3Q9BW11 206 aa33.14■■■□□ 2.9
SSU72-201ENST00000291386 DCTPP1Q9H773 170 aa33.14■■■□□ 2.9
SSU72-201ENST00000291386 SEMA3EO15041 775 aa33.13■■■□□ 2.89
SSU72-201ENST00000291386 PHKA1P46020 1223 aa33.13■■■□□ 2.89
SSU72-201ENST00000291386 ZNF280AP59817 542 aaPredicted RBP33.13■■■□□ 2.89
SSU72-201ENST00000291386 USP17L8P0C7I0 530 aa33.12■■■□□ 2.89
SSU72-201ENST00000291386 CERS5Q8N5B7 392 aa33.12■■■□□ 2.89
SSU72-201ENST00000291386 IQSEC3Q9UPP2 1182 aaPredicted RBP33.12■■■□□ 2.89
SSU72-201ENST00000291386 SHTN1A0MZ66 631 aa33.11■■■□□ 2.89
SSU72-201ENST00000291386 FRAT2O75474 233 aaPredicted RBP33.11■■■□□ 2.89
SSU72-201ENST00000291386 LDHDQ86WU2 507 aa33.1■■■□□ 2.89
SSU72-201ENST00000291386 TBC1D22AQ8WUA7 517 aa33.1■■■□□ 2.89
SSU72-201ENST00000291386 EAF2Q96CJ1 260 aaPredicted RBP33.1■■■□□ 2.89
SSU72-201ENST00000291386 DENND2AQ9ULE3 1009 aa33.09■■■□□ 2.89
SSU72-201ENST00000291386 JAG2Q9Y219 1238 aa33.09■■■□□ 2.89
SSU72-201ENST00000291386 PDS5AQ29RF7 1337 aaKnown RBP33.08■■■□□ 2.89
SSU72-201ENST00000291386 MFSD14BQ5SR56 506 aa33.08■■■□□ 2.89
SSU72-201ENST00000291386 COL1A1P02452 1464 aaPredicted RBP33.07■■■□□ 2.88
SSU72-201ENST00000291386 POTEIP0CG38 1075 aa33.07■■■□□ 2.88
SSU72-201ENST00000291386 POTEJP0CG39 1038 aa33.07■■■□□ 2.88
SSU72-201ENST00000291386 HDAC1Q13547 482 aaPredicted RBP33.07■■■□□ 2.88
SSU72-201ENST00000291386 EAPPQ56P03 285 aaPredicted RBP33.07■■■□□ 2.88
SSU72-201ENST00000291386 GORABQ5T7V8 394 aa33.07■■■□□ 2.88
SSU72-201ENST00000291386 DBNDD2Q9BQY9 259 aa33.07■■■□□ 2.88
SSU72-201ENST00000291386 ARID4AP29374 1257 aaPredicted RBP33.06■■■□□ 2.88
SSU72-201ENST00000291386 CHAF1AQ13111 956 aaPredicted RBP33.06■■■□□ 2.88
SSU72-201ENST00000291386 CLASRPQ8N2M8 674 aaKnown RBP33.06■■■□□ 2.88
SSU72-201ENST00000291386 OGFOD1Q8N543 542 aa33.06■■■□□ 2.88
SSU72-201ENST00000291386 SMC1BQ8NDV3 1235 aa33.06■■■□□ 2.88
SSU72-201ENST00000291386 WDR66Q8TBY9 1149 aa33.06■■■□□ 2.88
SSU72-201ENST00000291386 TRPM4Q8TD43 1214 aa33.06■■■□□ 2.88
SSU72-201ENST00000291386 DBNLQ9UJU6 430 aaKnown RBP33.06■■■□□ 2.88
SSU72-201ENST00000291386 HIRAP54198 1017 aaPredicted RBP33.05■■■□□ 2.88
SSU72-201ENST00000291386 FSTL1Q12841 308 aa33.05■■■□□ 2.88
SSU72-201ENST00000291386 SAMD7Q7Z3H4 446 aa33.05■■■□□ 2.88
SSU72-201ENST00000291386 KIAA0825Q8IV33 1275 aa33.05■■■□□ 2.88
SSU72-201ENST00000291386 ZNF512BQ96KM6 892 aaPredicted RBP33.05■■■□□ 2.88
SSU72-201ENST00000291386 IL1RAPL2Q9NP60 686 aa33.05■■■□□ 2.88
SSU72-201ENST00000291386 PGAP2Q9UHJ9 254 aa33.05■■■□□ 2.88
SSU72-201ENST00000291386 HDAC9Q9UKV0 1011 aa33.05■■■□□ 2.88
SSU72-201ENST00000291386 SALL1Q9NSC2 1324 aa33.04■■■□□ 2.88
SSU72-201ENST00000291386 UQCRFS1P1P0C7P4 283 aa33.04■■■□□ 2.88
SSU72-201ENST00000291386 RASGRF1Q13972 1273 aa33.04■■■□□ 2.88
SSU72-201ENST00000291386 CCDC158Q5M9N0 1113 aa33.04■■■□□ 2.88
SSU72-201ENST00000291386 CHADLQ6NUI6 762 aa33.04■■■□□ 2.88
SSU72-201ENST00000291386 AACSQ86V21 672 aa33.04■■■□□ 2.88
SSU72-201ENST00000291386 ZC3H15Q8WU90 426 aaKnown RBP33.04■■■□□ 2.88
SSU72-201ENST00000291386 LRRCC1Q9C099 1032 aa33.04■■■□□ 2.88
SSU72-201ENST00000291386 CCDC8Q9H0W5 538 aaPredicted RBP33.04■■■□□ 2.88
SSU72-201ENST00000291386 MYOZ2Q9NPC6 264 aa33.04■■■□□ 2.88
SSU72-201ENST00000291386 SUGT1Q9Y2Z0 365 aa33.04■■■□□ 2.88
SSU72-201ENST00000291386 APBB1O00213 710 aa33.03■■■□□ 2.88
SSU72-201ENST00000291386 EGFRP00533 1210 aa33.03■■■□□ 2.88
SSU72-201ENST00000291386 KIF4BQ2VIQ3 1234 aa33.03■■■□□ 2.88
SSU72-201ENST00000291386 TBC1D10BQ4KMP7 808 aaPredicted RBP33.03■■■□□ 2.88
SSU72-201ENST00000291386 TLR7Q9NYK1 1049 aaKnown RBP33.02■■■□□ 2.88
SSU72-201ENST00000291386 IRX6P78412 446 aaPredicted RBP33.01■■■□□ 2.87
SSU72-201ENST00000291386 CLEC11AQ9Y240 323 aa33.01■■■□□ 2.87
SSU72-201ENST00000291386 C1QTNF8P60827 252 aa33■■■□□ 2.87
SSU72-201ENST00000291386 AKAP11Q9UKA4 1901 aa32.99■■■□□ 2.87
SSU72-201ENST00000291386 TTC39AQ5SRH9 613 aa32.99■■■□□ 2.87
SSU72-201ENST00000291386 RBM26Q5T8P6 1007 aaKnown RBP32.99■■■□□ 2.87
SSU72-201ENST00000291386 MTMR14Q8NCE2 650 aa32.99■■■□□ 2.87
SSU72-201ENST00000291386 HMG20BQ9P0W2 317 aa32.99■■■□□ 2.87
SSU72-201ENST00000291386 GRIK5Q16478 980 aa32.98■■■□□ 2.87
SSU72-201ENST00000291386 ZGPATQ8N5A5 531 aaKnown RBP32.98■■■□□ 2.87
SSU72-201ENST00000291386 SPATA5Q8NB90 893 aa32.98■■■□□ 2.87
SSU72-201ENST00000291386 GCC1Q96CN9 775 aa32.98■■■□□ 2.87
SSU72-201ENST00000291386 ZBED3Q96IU2 234 aaPredicted RBP32.98■■■□□ 2.87
SSU72-201ENST00000291386 MRIQ9BWK5 157 aa32.98■■■□□ 2.87
SSU72-201ENST00000291386 TTF2Q9UNY4 1162 aaKnown RBP32.98■■■□□ 2.87
SSU72-201ENST00000291386 F8W031 263 aaPredicted RBP32.97■■■□□ 2.87
SSU72-201ENST00000291386 MCAMP43121 646 aa32.97■■■□□ 2.87
SSU72-201ENST00000291386 HDLBPQ00341 1268 aaKnown RBP32.97■■■□□ 2.87
SSU72-201ENST00000291386 RWDD1Q9H446 243 aaPredicted RBP32.97■■■□□ 2.87
SSU72-201ENST00000291386 SERPINA10Q9UK55 444 aa32.97■■■□□ 2.87
SSU72-201ENST00000291386 CENPBP07199 599 aaPredicted RBP32.96■■■□□ 2.87
SSU72-201ENST00000291386 IFIT2P09913 472 aaKnown RBP32.96■■■□□ 2.87
SSU72-201ENST00000291386 SCARF1Q14162 830 aa32.95■■■□□ 2.87
SSU72-201ENST00000291386 MAST3O60307 1309 aa32.95■■■□□ 2.86
SSU72-201ENST00000291386 WNT10BO00744 389 aa32.94■■■□□ 2.86
SSU72-201ENST00000291386 SMARCA5O60264 1052 aaPredicted RBP32.93■■■□□ 2.86
SSU72-201ENST00000291386 MAP1SQ66K74 1059 aaPredicted RBP32.93■■■□□ 2.86
SSU72-201ENST00000291386 CNTROBQ8N137 903 aa32.93■■■□□ 2.86
SSU72-201ENST00000291386 ITGBL1O95965 494 aaPredicted RBP32.92■■■□□ 2.86
SSU72-201ENST00000291386 DLGAP5Q15398 846 aa32.92■■■□□ 2.86
SSU72-201ENST00000291386 CFAP100Q494V2 611 aa32.92■■■□□ 2.86
SSU72-201ENST00000291386 PI16Q6UXB8 463 aa32.92■■■□□ 2.86
SSU72-201ENST00000291386 PPIL4Q8WUA2 492 aaKnown RBP eCLIP32.92■■■□□ 2.86
SSU72-201ENST00000291386 ECM29Q5VYK3 1845 aa32.92■■■□□ 2.86
SSU72-201ENST00000291386 POLR2AP24928 1970 aaKnown RBP32.91■■■□□ 2.86
SSU72-201ENST00000291386 LDHBP07195 334 aaKnown RBP32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms