RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 LRRC24Q50LG9 513 aa13.15□□□□□ -0.3
SNF8-201ENST00000290330 ZBED3Q96IU2 234 aaPredicted RBP13.15□□□□□ -0.3
SNF8-201ENST00000290330 ZIC5Q96T25 663 aa13.15□□□□□ -0.3
SNF8-201ENST00000290330 NOB1Q9ULX3 412 aaKnown RBP13.15□□□□□ -0.3
SNF8-201ENST00000290330 A0A1B0GUL6 1792 aa13.15□□□□□ -0.31
SNF8-201ENST00000290330 GYG1P46976 350 aa13.14□□□□□ -0.31
SNF8-201ENST00000290330 RARSP54136 660 aaKnown RBP13.14□□□□□ -0.31
SNF8-201ENST00000290330 FKBP1AP62942 108 aaKnown RBP13.14□□□□□ -0.31
SNF8-201ENST00000290330 FKBP1BP68106 108 aa13.14□□□□□ -0.31
SNF8-201ENST00000290330 PRAMEF18Q5VWM3 479 aa13.14□□□□□ -0.31
SNF8-201ENST00000290330 TDRD7Q8NHU6 1098 aaKnown RBP13.14□□□□□ -0.31
SNF8-201ENST00000290330 KLHDC4Q8TBB5 520 aa13.14□□□□□ -0.31
SNF8-201ENST00000290330 CCDC102AQ96A19 550 aa13.14□□□□□ -0.31
SNF8-201ENST00000290330 FAM84BQ96KN1 310 aaPredicted RBP13.14□□□□□ -0.31
SNF8-201ENST00000290330 JAG2Q9Y219 1238 aa13.14□□□□□ -0.31
SNF8-201ENST00000290330 HIBADHP31937 336 aaKnown RBP13.13□□□□□ -0.31
SNF8-201ENST00000290330 ZNF157P51786 506 aaPredicted RBP13.13□□□□□ -0.31
SNF8-201ENST00000290330 DLGAP5Q15398 846 aa13.13□□□□□ -0.31
SNF8-201ENST00000290330 VGLL2Q8N8G2 317 aa13.13□□□□□ -0.31
SNF8-201ENST00000290330 API5Q9BZZ5 524 aaKnown RBP13.13□□□□□ -0.31
SNF8-201ENST00000290330 FAM205AQ6ZU69 1335 aa13.13□□□□□ -0.31
SNF8-201ENST00000290330 F8W031 263 aaPredicted RBP13.12□□□□□ -0.31
SNF8-201ENST00000290330 CA12O43570 354 aa13.12□□□□□ -0.31
SNF8-201ENST00000290330 PDE8BO95263 885 aa13.12□□□□□ -0.31
SNF8-201ENST00000290330 RFX5P48382 616 aaPredicted RBP13.12□□□□□ -0.31
SNF8-201ENST00000290330 METTL24Q5JXM2 366 aa13.12□□□□□ -0.31
SNF8-201ENST00000290330 MTMR14Q8NCE2 650 aa13.12□□□□□ -0.31
SNF8-201ENST00000290330 TSKSQ9UJT2 592 aa13.12□□□□□ -0.31
SNF8-201ENST00000290330 PCDHAC2Q9Y5I4 1007 aa13.12□□□□□ -0.31
SNF8-201ENST00000290330 SLC10A3P09131 477 aa13.11□□□□□ -0.31
SNF8-201ENST00000290330 UBTFL1P0CB47 393 aaPredicted RBP13.11□□□□□ -0.31
SNF8-201ENST00000290330 KIF23Q02241 960 aaPredicted RBP13.11□□□□□ -0.31
SNF8-201ENST00000290330 CFAP100Q494V2 611 aa13.11□□□□□ -0.31
SNF8-201ENST00000290330 MOB2Q70IA6 237 aa13.11□□□□□ -0.31
SNF8-201ENST00000290330 FBXO33Q7Z6M2 555 aa13.11□□□□□ -0.31
SNF8-201ENST00000290330 APOBEC3FQ8IUX4 373 aaKnown RBP13.11□□□□□ -0.31
SNF8-201ENST00000290330 ARHGAP45Q92619 1136 aa13.11□□□□□ -0.31
SNF8-201ENST00000290330 EYA2O00167 538 aa13.1□□□□□ -0.31
SNF8-201ENST00000290330 CAPN15O75808 1086 aa13.1□□□□□ -0.31
SNF8-201ENST00000290330 PTPN12Q05209 780 aaKnown RBP13.1□□□□□ -0.31
SNF8-201ENST00000290330 MFSD14BQ5SR56 506 aa13.1□□□□□ -0.31
SNF8-201ENST00000290330 PRMT6Q96LA8 375 aaPredicted RBP13.1□□□□□ -0.31
SNF8-201ENST00000290330 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
SNF8-201ENST00000290330 KIF16BQ96L93 1317 aa13.1□□□□□ -0.31
SNF8-201ENST00000290330 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
SNF8-201ENST00000290330 UBE2Q2LH0YL09 131 aa13.09□□□□□ -0.31
SNF8-201ENST00000290330 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
SNF8-201ENST00000290330 FGFR2P21802 821 aa13.09□□□□□ -0.31
SNF8-201ENST00000290330 NF2P35240 595 aa13.09□□□□□ -0.31
SNF8-201ENST00000290330 CAVIN4Q5BKX8 364 aa13.09□□□□□ -0.31
SNF8-201ENST00000290330 VPS37DQ86XT2 251 aa13.09□□□□□ -0.31
SNF8-201ENST00000290330 RASAL3Q86YV0 1011 aa13.09□□□□□ -0.31
SNF8-201ENST00000290330 DEFB129Q9H1M3 183 aa13.09□□□□□ -0.31
SNF8-201ENST00000290330 PAPPA2Q9BXP8 1791 aa13.09□□□□□ -0.31
SNF8-201ENST00000290330 MYO1BO43795 1136 aa13.08□□□□□ -0.32
SNF8-201ENST00000290330 BCAMP50895 628 aa13.08□□□□□ -0.32
SNF8-201ENST00000290330 RBM5P52756 815 aaKnown RBP eCLIP13.08□□□□□ -0.32
SNF8-201ENST00000290330 TTLL12Q14166 644 aaPredicted RBP13.08□□□□□ -0.32
SNF8-201ENST00000290330 PUM3Q15397 648 aaKnown RBP13.08□□□□□ -0.32
SNF8-201ENST00000290330 INTS3Q68E01 1043 aaKnown RBP13.08□□□□□ -0.32
SNF8-201ENST00000290330 ATG9AQ7Z3C6 839 aa13.08□□□□□ -0.32
SNF8-201ENST00000290330 CSRNP1Q96S65 589 aa13.08□□□□□ -0.32
SNF8-201ENST00000290330 MEIS3Q99687 375 aa13.08□□□□□ -0.32
SNF8-201ENST00000290330 TTF2Q9UNY4 1162 aaKnown RBP13.08□□□□□ -0.32
SNF8-201ENST00000290330 IQSEC3Q9UPP2 1182 aaPredicted RBP13.08□□□□□ -0.32
SNF8-201ENST00000290330 HDAC5Q9UQL6 1122 aa13.08□□□□□ -0.32
SNF8-201ENST00000290330 LRRFIP2Q9Y608 721 aaKnown RBP13.08□□□□□ -0.32
SNF8-201ENST00000290330 AOX1Q06278 1338 aa13.08□□□□□ -0.32
SNF8-201ENST00000290330 CLRN2A0PK11 232 aa13.07□□□□□ -0.32
SNF8-201ENST00000290330 IFIT1P09914 478 aaKnown RBP13.07□□□□□ -0.32
SNF8-201ENST00000290330 SERPINA10Q9UK55 444 aa13.07□□□□□ -0.32
SNF8-201ENST00000290330 FBXO3Q9UK99 471 aa13.07□□□□□ -0.32
SNF8-201ENST00000290330 PPP2R3BQ9Y5P8 575 aa13.07□□□□□ -0.32
SNF8-201ENST00000290330 COL1A1P02452 1464 aaPredicted RBP13.06□□□□□ -0.32
SNF8-201ENST00000290330 IPO8O15397 1037 aaKnown RBP13.06□□□□□ -0.32
SNF8-201ENST00000290330 FRAT2O75474 233 aaPredicted RBP13.06□□□□□ -0.32
SNF8-201ENST00000290330 BCAR3O75815 825 aa13.06□□□□□ -0.32
SNF8-201ENST00000290330 CIAO1O76071 339 aa13.06□□□□□ -0.32
SNF8-201ENST00000290330 TRIM27P14373 513 aa13.06□□□□□ -0.32
SNF8-201ENST00000290330 HNRNPUQ00839 825 aaKnown RBP eCLIP13.06□□□□□ -0.32
SNF8-201ENST00000290330 CHAF1AQ13111 956 aaPredicted RBP13.06□□□□□ -0.32
SNF8-201ENST00000290330 PRKG1Q13976 671 aa13.06□□□□□ -0.32
SNF8-201ENST00000290330 GRIK5Q16478 980 aa13.06□□□□□ -0.32
SNF8-201ENST00000290330 LDLRAD1Q5T700 205 aa13.06□□□□□ -0.32
SNF8-201ENST00000290330 ARMC9Q7Z3E5 817 aa13.06□□□□□ -0.32
SNF8-201ENST00000290330 REM2Q8IYK8 340 aaPredicted RBP13.06□□□□□ -0.32
SNF8-201ENST00000290330 TBC1D22AQ8WUA7 517 aa13.06□□□□□ -0.32
SNF8-201ENST00000290330 LPIN2Q92539 896 aa13.06□□□□□ -0.32
SNF8-201ENST00000290330 SIL1Q9H173 461 aa13.06□□□□□ -0.32
SNF8-201ENST00000290330 RNF186Q9NXI6 227 aa13.06□□□□□ -0.32
SNF8-201ENST00000290330 SAGE1Q9NXZ1 904 aa13.06□□□□□ -0.32
SNF8-201ENST00000290330 TRPA1O75762 1119 aa13.05□□□□□ -0.32
SNF8-201ENST00000290330 SLC5A1P13866 664 aa13.05□□□□□ -0.32
SNF8-201ENST00000290330 CRKP46108 304 aa13.05□□□□□ -0.32
SNF8-201ENST00000290330 SPDYE2Q495Y8 402 aa13.05□□□□□ -0.32
SNF8-201ENST00000290330 ATF7IPQ6VMQ6 1270 aa13.05□□□□□ -0.32
SNF8-201ENST00000290330 DZIP1LQ8IYY4 767 aaKnown RBP13.05□□□□□ -0.32
SNF8-201ENST00000290330 FRAT1Q92837 279 aaPredicted RBP13.05□□□□□ -0.32
SNF8-201ENST00000290330 TDRD3Q9H7E2 651 aaKnown RBP13.05□□□□□ -0.32
SNF8-201ENST00000290330 VEZTQ9HBM0 779 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms