RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 UBE2HP62256 183 aa22.79■■□□□ 1.24
BRAF-201ENST00000288602 TTF1Q15361 905 aaPredicted RBP22.79■■□□□ 1.24
BRAF-201ENST00000288602 SPATA5Q8NB90 893 aa22.79■■□□□ 1.24
BRAF-201ENST00000288602 CTNNA3Q9UI47 895 aa22.79■■□□□ 1.24
BRAF-201ENST00000288602 DENND2AQ9ULE3 1009 aa22.79■■□□□ 1.24
BRAF-201ENST00000288602 LRP5O75197 1615 aa22.79■■□□□ 1.24
BRAF-201ENST00000288602 PFKFB2O60825 505 aa22.79■■□□□ 1.24
BRAF-201ENST00000288602 RNF214Q8ND24 703 aa22.79■■□□□ 1.24
BRAF-201ENST00000288602 ZNF652Q9Y2D9 606 aa22.79■■□□□ 1.24
BRAF-201ENST00000288602 CTDNEP1O95476 244 aa22.78■■□□□ 1.24
BRAF-201ENST00000288602 APPP05067 770 aa22.78■■□□□ 1.24
BRAF-201ENST00000288602 PDE6AP16499 860 aa22.78■■□□□ 1.24
BRAF-201ENST00000288602 TFIP11Q9UBB9 837 aaKnown RBP22.78■■□□□ 1.24
BRAF-201ENST00000288602 UQCRFS1P1P0C7P4 283 aa22.77■■□□□ 1.24
BRAF-201ENST00000288602 SYAP1Q96A49 352 aaPredicted RBP22.77■■□□□ 1.24
BRAF-201ENST00000288602 AGXT2Q9BYV1 514 aa22.77■■□□□ 1.24
BRAF-201ENST00000288602 RRAGDQ9NQL2 400 aaPredicted RBP22.77■■□□□ 1.24
BRAF-201ENST00000288602 USP21Q9UK80 565 aa22.77■■□□□ 1.24
BRAF-201ENST00000288602 IQSEC3Q9UPP2 1182 aaPredicted RBP22.77■■□□□ 1.24
BRAF-201ENST00000288602 COL5A3P25940 1745 aaPredicted RBP22.77■■□□□ 1.24
BRAF-201ENST00000288602 ZNF213O14771 459 aa22.77■■□□□ 1.24
BRAF-201ENST00000288602 CHRNDQ07001 517 aa22.77■■□□□ 1.24
BRAF-201ENST00000288602 ZSCAN25Q6NSZ9 544 aa22.77■■□□□ 1.24
BRAF-201ENST00000288602 PDIA3P30101 505 aaKnown RBP22.76■■□□□ 1.23
BRAF-201ENST00000288602 NSUN7Q8NE18 718 aaKnown RBP22.76■■□□□ 1.23
BRAF-201ENST00000288602 NKX2-3Q8TAU0 364 aa22.76■■□□□ 1.23
BRAF-201ENST00000288602 TAF1P21675 1872 aa22.76■■□□□ 1.23
BRAF-201ENST00000288602 TTC6Q86TZ1 520 aa22.76■■□□□ 1.23
BRAF-201ENST00000288602 RAB11FIP4Q86YS3 637 aa22.76■■□□□ 1.23
BRAF-201ENST00000288602 FAM184AQ8NB25 1140 aa22.76■■□□□ 1.23
BRAF-201ENST00000288602 TBC1D9BQ66K14 1250 aa22.75■■□□□ 1.23
BRAF-201ENST00000288602 SRP68Q9UHB9 627 aaKnown RBP22.75■■□□□ 1.23
BRAF-201ENST00000288602 TCRBV5S4A2TA0A5A2 114 aa22.75■■□□□ 1.23
BRAF-201ENST00000288602 FAM43AQ8N2R8 423 aa22.75■■□□□ 1.23
BRAF-201ENST00000288602 CCDC24Q8N4L8 307 aa22.75■■□□□ 1.23
BRAF-201ENST00000288602 MAGEB6Q8N7X4 407 aa22.75■■□□□ 1.23
BRAF-201ENST00000288602 NBPF3Q9H094 633 aa22.75■■□□□ 1.23
BRAF-201ENST00000288602 PTPDC1A2A3K4 754 aa22.74■■□□□ 1.23
BRAF-201ENST00000288602 H3BQV1 296 aa22.74■■□□□ 1.23
BRAF-201ENST00000288602 KRT85P78386 507 aa22.74■■□□□ 1.23
BRAF-201ENST00000288602 UBE3CQ15386 1083 aa22.74■■□□□ 1.23
BRAF-201ENST00000288602 IFFO2Q5TF58 517 aa22.74■■□□□ 1.23
BRAF-201ENST00000288602 SMARCC2Q8TAQ2 1214 aa22.74■■□□□ 1.23
BRAF-201ENST00000288602 PRC1O43663 620 aa22.74■■□□□ 1.23
BRAF-201ENST00000288602 CLEC4GQ6UXB4 293 aa22.74■■□□□ 1.23
BRAF-201ENST00000288602 FNBP4Q8N3X1 1017 aaPredicted RBP22.74■■□□□ 1.23
BRAF-201ENST00000288602 BCL2L12Q9HB09 334 aa22.74■■□□□ 1.23
BRAF-201ENST00000288602 EP400Q96L91 3159 aa22.74■■□□□ 1.23
BRAF-201ENST00000288602 GTF2E1P29083 439 aaPredicted RBP22.73■■□□□ 1.23
BRAF-201ENST00000288602 ANTXR2P58335 489 aa22.73■■□□□ 1.23
BRAF-201ENST00000288602 AMIGO3Q86WK7 504 aa22.73■■□□□ 1.23
BRAF-201ENST00000288602 MB21D2Q8IYB1 491 aaPredicted RBP22.73■■□□□ 1.23
BRAF-201ENST00000288602 CICQ96RK0 1608 aaPredicted RBP22.73■■□□□ 1.23
BRAF-201ENST00000288602 AIDAQ96BJ3 306 aa22.73■■□□□ 1.23
BRAF-201ENST00000288602 TBC1D10CQ8IV04 446 aa22.72■■□□□ 1.23
BRAF-201ENST00000288602 NCOA7Q8NI08 942 aa22.72■■□□□ 1.23
BRAF-201ENST00000288602 ANP32BQ92688 251 aaKnown RBP22.72■■□□□ 1.23
BRAF-201ENST00000288602 INCENPQ9NQS7 918 aa22.72■■□□□ 1.23
BRAF-201ENST00000288602 CSPP1Q1MSJ5 1256 aa22.72■■□□□ 1.23
BRAF-201ENST00000288602 CCDC183Q5T5S1 534 aa22.72■■□□□ 1.23
BRAF-201ENST00000288602 RALYLQ86SE5 291 aaKnown RBP22.72■■□□□ 1.23
BRAF-201ENST00000288602 TSPY26PQ9H489 355 aa22.72■■□□□ 1.23
BRAF-201ENST00000288602 GNPATO15228 680 aa22.71■■□□□ 1.23
BRAF-201ENST00000288602 MCM5P33992 734 aa22.71■■□□□ 1.23
BRAF-201ENST00000288602 ZNF274Q96GC6 653 aaPredicted RBP22.71■■□□□ 1.23
BRAF-201ENST00000288602 LLPHQ9BRT6 129 aaKnown RBP22.71■■□□□ 1.23
BRAF-201ENST00000288602 BCORQ6W2J9 1755 aa22.71■■□□□ 1.23
BRAF-201ENST00000288602 ARAP2Q8WZ64 1704 aa22.71■■□□□ 1.23
BRAF-201ENST00000288602 PDIA4P13667 645 aaKnown RBP22.71■■□□□ 1.23
BRAF-201ENST00000288602 GUCY1B3Q02153 619 aa22.71■■□□□ 1.23
BRAF-201ENST00000288602 CCDC173Q0VFZ6 552 aa22.71■■□□□ 1.23
BRAF-201ENST00000288602 TRIM44Q96DX7 344 aaPredicted RBP22.71■■□□□ 1.23
BRAF-201ENST00000288602 STRBPQ96SI9 672 aaKnown RBP22.71■■□□□ 1.23
BRAF-201ENST00000288602 ARMT1Q9H993 441 aa22.71■■□□□ 1.23
BRAF-201ENST00000288602 MAP3K12Q12852 859 aa22.7■■□□□ 1.22
BRAF-201ENST00000288602 CDC5LQ99459 802 aaKnown RBP22.7■■□□□ 1.22
BRAF-201ENST00000288602 MBD4O95243 580 aa22.7■■□□□ 1.22
BRAF-201ENST00000288602 GYG1P46976 350 aa22.7■■□□□ 1.22
BRAF-201ENST00000288602 RESTQ13127 1097 aa22.7■■□□□ 1.22
BRAF-201ENST00000288602 ANKRD18AQ8IVF6 992 aa22.7■■□□□ 1.22
BRAF-201ENST00000288602 ATRNO75882 1429 aa22.7■■□□□ 1.22
BRAF-201ENST00000288602 RTL9Q8NET4 1388 aa22.69■■□□□ 1.22
BRAF-201ENST00000288602 CNTNAP4Q9C0A0 1308 aa22.69■■□□□ 1.22
BRAF-201ENST00000288602 KLF18A0A0U1RQI7 1052 aa22.69■■□□□ 1.22
BRAF-201ENST00000288602 CELF1Q92879 486 aaKnown RBP22.69■■□□□ 1.22
BRAF-201ENST00000288602 SPATA32Q96LK8 384 aa22.69■■□□□ 1.22
BRAF-201ENST00000288602 PHF14O94880 888 aa22.69■■□□□ 1.22
BRAF-201ENST00000288602 CEBPZQ03701 1054 aaKnown RBP22.69■■□□□ 1.22
BRAF-201ENST00000288602 GIMAP6Q6P9H5 292 aa22.69■■□□□ 1.22
BRAF-201ENST00000288602 PPP1R9BQ96SB3 815 aa22.69■■□□□ 1.22
BRAF-201ENST00000288602 CCNL1Q9UK58 526 aaPredicted RBP22.69■■□□□ 1.22
BRAF-201ENST00000288602 PRKAB2O43741 272 aa22.68■■□□□ 1.22
BRAF-201ENST00000288602 CYB5R4Q7L1T6 521 aa22.68■■□□□ 1.22
BRAF-201ENST00000288602 LAMB2P55268 1798 aa22.68■■□□□ 1.22
BRAF-201ENST00000288602 EPB41L4AQ9HCS5 686 aaPredicted RBP22.68■■□□□ 1.22
BRAF-201ENST00000288602 SALL1Q9NSC2 1324 aa22.67■■□□□ 1.22
BRAF-201ENST00000288602 BTAF1O14981 1849 aa22.67■■□□□ 1.22
BRAF-201ENST00000288602 FDPSP14324 419 aaKnown RBP22.67■■□□□ 1.22
BRAF-201ENST00000288602 MIGA1Q8NAN2 632 aa22.67■■□□□ 1.22
BRAF-201ENST00000288602 LEO1Q8WVC0 666 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms