RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 SAMD7Q7Z3H4 446 aa24.53■■□□□ 1.52
TIMP4-201ENST00000287814 TRPM4Q8TD43 1214 aa24.53■■□□□ 1.52
TIMP4-201ENST00000287814 GPR108Q9NPR9 543 aa24.53■■□□□ 1.52
TIMP4-201ENST00000287814 H7C1D1 291 aa24.52■■□□□ 1.52
TIMP4-201ENST00000287814 IRX6P78412 446 aaPredicted RBP24.52■■□□□ 1.52
TIMP4-201ENST00000287814 APBB1O00213 710 aa24.51■■□□□ 1.51
TIMP4-201ENST00000287814 PNMA8AQ86V59 439 aaPredicted RBP24.51■■□□□ 1.51
TIMP4-201ENST00000287814 RBM46Q8TBY0 533 aaKnown RBP24.51■■□□□ 1.51
TIMP4-201ENST00000287814 RHPN1Q8TCX5 695 aa24.51■■□□□ 1.51
TIMP4-201ENST00000287814 FRAT2O75474 233 aaPredicted RBP24.5■■□□□ 1.51
TIMP4-201ENST00000287814 USP17L8P0C7I0 530 aa24.5■■□□□ 1.51
TIMP4-201ENST00000287814 ZNF280AP59817 542 aaPredicted RBP24.5■■□□□ 1.51
TIMP4-201ENST00000287814 CHAF1AQ13111 956 aaPredicted RBP24.5■■□□□ 1.51
TIMP4-201ENST00000287814 HSP90AB4PQ58FF6 505 aa24.5■■□□□ 1.51
TIMP4-201ENST00000287814 USP50Q70EL3 339 aaPredicted RBP24.5■■□□□ 1.51
TIMP4-201ENST00000287814 KIAA0825Q8IV33 1275 aa24.5■■□□□ 1.51
TIMP4-201ENST00000287814 EAF2Q96CJ1 260 aaPredicted RBP24.5■■□□□ 1.51
TIMP4-201ENST00000287814 TBC1D10BQ4KMP7 808 aaPredicted RBP24.5■■□□□ 1.51
TIMP4-201ENST00000287814 RBM26Q5T8P6 1007 aaKnown RBP24.5■■□□□ 1.51
TIMP4-201ENST00000287814 ERC1Q8IUD2 1116 aa24.5■■□□□ 1.51
TIMP4-201ENST00000287814 IL1RAPL2Q9NP60 686 aa24.5■■□□□ 1.51
TIMP4-201ENST00000287814 MYO3BQ8WXR4 1341 aa24.49■■□□□ 1.51
TIMP4-201ENST00000287814 COL1A1P02452 1464 aaPredicted RBP24.49■■□□□ 1.51
TIMP4-201ENST00000287814 GRIK5Q16478 980 aa24.49■■□□□ 1.51
TIMP4-201ENST00000287814 DBNDD2Q9BQY9 259 aa24.49■■□□□ 1.51
TIMP4-201ENST00000287814 ARAP2Q8WZ64 1704 aa24.49■■□□□ 1.51
TIMP4-201ENST00000287814 C1QTNF8P60827 252 aa24.48■■□□□ 1.51
TIMP4-201ENST00000287814 FKBP1AP62942 108 aaKnown RBP24.48■■□□□ 1.51
TIMP4-201ENST00000287814 MFSD14BQ5SR56 506 aa24.48■■□□□ 1.51
TIMP4-201ENST00000287814 LDHDQ86WU2 507 aa24.48■■□□□ 1.51
TIMP4-201ENST00000287814 CCDC8Q9H0W5 538 aaPredicted RBP24.48■■□□□ 1.51
TIMP4-201ENST00000287814 TLR7Q9NYK1 1049 aaKnown RBP24.48■■□□□ 1.51
TIMP4-201ENST00000287814 DCTPP1Q9H773 170 aa24.47■■□□□ 1.51
TIMP4-201ENST00000287814 DBNLQ9UJU6 430 aaKnown RBP24.47■■□□□ 1.51
TIMP4-201ENST00000287814 CLEC11AQ9Y240 323 aa24.47■■□□□ 1.51
TIMP4-201ENST00000287814 ADAMTSL1Q8N6G6 1762 aa24.47■■□□□ 1.51
TIMP4-201ENST00000287814 F8W031 263 aaPredicted RBP24.46■■□□□ 1.51
TIMP4-201ENST00000287814 RAB11FIP3O75154 756 aa24.46■■□□□ 1.51
TIMP4-201ENST00000287814 KIF1BPQ96EK5 621 aa24.46■■□□□ 1.51
TIMP4-201ENST00000287814 GNL3LQ9NVN8 582 aaKnown RBP24.46■■□□□ 1.51
TIMP4-201ENST00000287814 RASGRF1Q13972 1273 aa24.46■■□□□ 1.51
TIMP4-201ENST00000287814 CHADLQ6NUI6 762 aa24.46■■□□□ 1.51
TIMP4-201ENST00000287814 SMC1BQ8NDV3 1235 aa24.46■■□□□ 1.51
TIMP4-201ENST00000287814 MYOZ2Q9NPC6 264 aa24.46■■□□□ 1.51
TIMP4-201ENST00000287814 KIF4BQ2VIQ3 1234 aa24.45■■□□□ 1.5
TIMP4-201ENST00000287814 GORABQ5T7V8 394 aa24.45■■□□□ 1.5
TIMP4-201ENST00000287814 MAP1SQ66K74 1059 aaPredicted RBP24.45■■□□□ 1.5
TIMP4-201ENST00000287814 ZBTB22O15209 634 aa24.44■■□□□ 1.5
TIMP4-201ENST00000287814 OGFOD1Q8N543 542 aa24.44■■□□□ 1.5
TIMP4-201ENST00000287814 ASTN2O75129 1339 aaPredicted RBP24.44■■□□□ 1.5
TIMP4-201ENST00000287814 SEMA3EO15041 775 aa24.43■■□□□ 1.5
TIMP4-201ENST00000287814 AAMPQ13685 434 aa24.43■■□□□ 1.5
TIMP4-201ENST00000287814 SCARF1Q14162 830 aa24.43■■□□□ 1.5
TIMP4-201ENST00000287814 AACSQ86V21 672 aa24.43■■□□□ 1.5
TIMP4-201ENST00000287814 BCL11AQ9H165 835 aa24.43■■□□□ 1.5
TIMP4-201ENST00000287814 DENND2AQ9ULE3 1009 aa24.43■■□□□ 1.5
TIMP4-201ENST00000287814 SMARCA5O60264 1052 aaPredicted RBP24.43■■□□□ 1.5
TIMP4-201ENST00000287814 FSTL1Q12841 308 aa24.43■■□□□ 1.5
TIMP4-201ENST00000287814 PI16Q6UXB8 463 aa24.43■■□□□ 1.5
TIMP4-201ENST00000287814 TBC1D22AQ8WUA7 517 aa24.43■■□□□ 1.5
TIMP4-201ENST00000287814 PGAP2Q9UHJ9 254 aa24.43■■□□□ 1.5
TIMP4-201ENST00000287814 PCDHAC2Q9Y5I4 1007 aa24.43■■□□□ 1.5
TIMP4-201ENST00000287814 ARID4AP29374 1257 aaPredicted RBP24.42■■□□□ 1.5
TIMP4-201ENST00000287814 HMG20BQ9P0W2 317 aa24.42■■□□□ 1.5
TIMP4-201ENST00000287814 CLASRPQ8N2M8 674 aaKnown RBP24.41■■□□□ 1.5
TIMP4-201ENST00000287814 WDR66Q8TBY9 1149 aa24.41■■□□□ 1.5
TIMP4-201ENST00000287814 HDAC9Q9UKV0 1011 aa24.41■■□□□ 1.5
TIMP4-201ENST00000287814 TTF2Q9UNY4 1162 aaKnown RBP24.41■■□□□ 1.5
TIMP4-201ENST00000287814 MCAMP43121 646 aa24.4■■□□□ 1.5
TIMP4-201ENST00000287814 NBPF9Q3BBW0 867 aa24.4■■□□□ 1.5
TIMP4-201ENST00000287814 CNTROBQ8N137 903 aa24.4■■□□□ 1.5
TIMP4-201ENST00000287814 ZC3H15Q8WU90 426 aaKnown RBP24.4■■□□□ 1.5
TIMP4-201ENST00000287814 LRRCC1Q9C099 1032 aa24.4■■□□□ 1.5
TIMP4-201ENST00000287814 ITGBL1O95965 494 aaPredicted RBP24.4■■□□□ 1.5
TIMP4-201ENST00000287814 HDAC1Q13547 482 aaPredicted RBP24.4■■□□□ 1.5
TIMP4-201ENST00000287814 CCDC158Q5M9N0 1113 aa24.4■■□□□ 1.5
TIMP4-201ENST00000287814 ZBED3Q96IU2 234 aaPredicted RBP24.4■■□□□ 1.5
TIMP4-201ENST00000287814 WNT10BO00744 389 aa24.39■■□□□ 1.49
TIMP4-201ENST00000287814 MMP14P50281 582 aa24.39■■□□□ 1.49
TIMP4-201ENST00000287814 TTC39AQ5SRH9 613 aa24.39■■□□□ 1.49
TIMP4-201ENST00000287814 UQCRFS1P1P0C7P4 283 aa24.38■■□□□ 1.49
TIMP4-201ENST00000287814 PRDX5P30044 214 aa24.38■■□□□ 1.49
TIMP4-201ENST00000287814 SPATA5Q8NB90 893 aa24.38■■□□□ 1.49
TIMP4-201ENST00000287814 SNRKQ9NRH2 765 aa24.38■■□□□ 1.49
TIMP4-201ENST00000287814 AOX1Q06278 1338 aa24.38■■□□□ 1.49
TIMP4-201ENST00000287814 PDS5AQ29RF7 1337 aaKnown RBP24.38■■□□□ 1.49
TIMP4-201ENST00000287814 SALL1Q9NSC2 1324 aa24.38■■□□□ 1.49
TIMP4-201ENST00000287814 FMR1Q06787 632 aaKnown RBP eCLIP24.37■■□□□ 1.49
TIMP4-201ENST00000287814 CFAP100Q494V2 611 aa24.37■■□□□ 1.49
TIMP4-201ENST00000287814 ZNF512BQ96KM6 892 aaPredicted RBP24.37■■□□□ 1.49
TIMP4-201ENST00000287814 MYH13Q9UKX3 1938 aa24.37■■□□□ 1.49
TIMP4-201ENST00000287814 IGHDP01880 384 aa24.37■■□□□ 1.49
TIMP4-201ENST00000287814 PRMT6Q96LA8 375 aaPredicted RBP24.37■■□□□ 1.49
TIMP4-201ENST00000287814 SUGT1Q9Y2Z0 365 aa24.37■■□□□ 1.49
TIMP4-201ENST00000287814 IFIT2P09913 472 aaKnown RBP24.36■■□□□ 1.49
TIMP4-201ENST00000287814 DLGAP5Q15398 846 aa24.36■■□□□ 1.49
TIMP4-201ENST00000287814 DLK2Q6UY11 383 aa24.36■■□□□ 1.49
TIMP4-201ENST00000287814 TBC1D9Q6ZT07 1266 aa24.36■■□□□ 1.49
TIMP4-201ENST00000287814 MTMR14Q8NCE2 650 aa24.36■■□□□ 1.49
TIMP4-201ENST00000287814 GLIS2Q9BZE0 524 aaPredicted RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms