RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 INF2Q27J81 1249 aa10.24□□□□□ -0.77
SMC2-201ENST00000286398 PPP1R42Q7Z4L9 355 aa10.24□□□□□ -0.77
SMC2-201ENST00000286398 C17orf53Q8N3J3 647 aaPredicted RBP10.24□□□□□ -0.77
SMC2-201ENST00000286398 ZGPATQ8N5A5 531 aaKnown RBP10.24□□□□□ -0.77
SMC2-201ENST00000286398 ERMNQ8TAM6 284 aa10.24□□□□□ -0.77
SMC2-201ENST00000286398 PPFIA1Q13136 1202 aa10.24□□□□□ -0.77
SMC2-201ENST00000286398 WTAPQ15007 396 aa10.24□□□□□ -0.77
SMC2-201ENST00000286398 BICDL1Q6ZP65 573 aa10.24□□□□□ -0.77
SMC2-201ENST00000286398 TSGA10Q9BZW7 698 aa10.24□□□□□ -0.77
SMC2-201ENST00000286398 ATAD2Q6PL18 1390 aa10.24□□□□□ -0.77
SMC2-201ENST00000286398 RNF10Q8N5U6 811 aaKnown RBP10.23□□□□□ -0.77
SMC2-201ENST00000286398 SPATS2LQ9NUQ6 558 aaKnown RBP10.23□□□□□ -0.77
SMC2-201ENST00000286398 PCDHB15Q9Y5E8 787 aa10.23□□□□□ -0.77
SMC2-201ENST00000286398 RBBP5Q15291 538 aaKnown RBP10.23□□□□□ -0.77
SMC2-201ENST00000286398 UTP14CQ5TAP6 766 aaKnown RBP10.23□□□□□ -0.77
SMC2-201ENST00000286398 EPSTI1Q96J88 318 aa10.23□□□□□ -0.77
SMC2-201ENST00000286398 FAM169AQ9Y6X4 670 aa10.23□□□□□ -0.77
SMC2-201ENST00000286398 CETN3O15182 167 aa10.23□□□□□ -0.77
SMC2-201ENST00000286398 STARD3NLO95772 234 aa10.23□□□□□ -0.77
SMC2-201ENST00000286398 BRD2P25440 801 aaKnown RBP10.23□□□□□ -0.77
SMC2-201ENST00000286398 TRIM68Q6AZZ1 485 aa10.23□□□□□ -0.77
SMC2-201ENST00000286398 MRFAP1L1Q96HT8 127 aa10.23□□□□□ -0.77
SMC2-201ENST00000286398 TRIM4Q9C037 500 aa10.23□□□□□ -0.77
SMC2-201ENST00000286398 ACTN4O43707 911 aaKnown RBP10.23□□□□□ -0.77
SMC2-201ENST00000286398 VPS52Q8N1B4 723 aa10.23□□□□□ -0.77
SMC2-201ENST00000286398 GPR161Q8N6U8 529 aaKnown RBP10.23□□□□□ -0.77
SMC2-201ENST00000286398 WDR97A6NE52 1622 aa10.23□□□□□ -0.77
SMC2-201ENST00000286398 PTCD1O75127 700 aaKnown RBP10.23□□□□□ -0.77
SMC2-201ENST00000286398 PDE1AP54750 535 aa10.23□□□□□ -0.77
SMC2-201ENST00000286398 PDE4BQ07343 736 aa10.23□□□□□ -0.77
SMC2-201ENST00000286398 CCDC62Q6P9F0 684 aa10.23□□□□□ -0.77
SMC2-201ENST00000286398 Q6ZUG5 572 aa10.23□□□□□ -0.77
SMC2-201ENST00000286398 XAB2Q9HCS7 855 aaKnown RBP10.23□□□□□ -0.77
SMC2-201ENST00000286398 RHPN1Q8TCX5 695 aa10.22□□□□□ -0.77
SMC2-201ENST00000286398 CAPN7Q9Y6W3 813 aa10.22□□□□□ -0.77
SMC2-201ENST00000286398 UAP1Q16222 522 aaPredicted RBP10.22□□□□□ -0.77
SMC2-201ENST00000286398 RTN1Q16799 776 aa10.22□□□□□ -0.77
SMC2-201ENST00000286398 IFT20Q8IY31 132 aa10.22□□□□□ -0.77
SMC2-201ENST00000286398 BCL2L12Q9HB09 334 aa10.22□□□□□ -0.77
SMC2-201ENST00000286398 TTF2Q9UNY4 1162 aaKnown RBP10.22□□□□□ -0.77
SMC2-201ENST00000286398 CXorf38Q8TB03 319 aa10.22□□□□□ -0.77
SMC2-201ENST00000286398 DACT3Q96B18 629 aaPredicted RBP10.22□□□□□ -0.77
SMC2-201ENST00000286398 INTS4Q96HW7 963 aaKnown RBP10.22□□□□□ -0.77
SMC2-201ENST00000286398 DBF4Q9UBU7 674 aaPredicted RBP10.22□□□□□ -0.77
SMC2-201ENST00000286398 RTEL1-TNFRSF6BF6WH68 1400 aa10.22□□□□□ -0.77
SMC2-201ENST00000286398 VPS41P49754 854 aa10.22□□□□□ -0.77
SMC2-201ENST00000286398 FAF1Q9UNN5 650 aaPredicted RBP10.21□□□□□ -0.77
SMC2-201ENST00000286398 TACC3Q9Y6A5 838 aa10.21□□□□□ -0.77
SMC2-201ENST00000286398 IRX5P78411 483 aaPredicted RBP10.21□□□□□ -0.77
SMC2-201ENST00000286398 SEL1L2Q5TEA6 688 aa10.21□□□□□ -0.77
SMC2-201ENST00000286398 TMTC2Q8N394 836 aa10.21□□□□□ -0.77
SMC2-201ENST00000286398 IGSF22Q8N9C0 903 aa10.21□□□□□ -0.77
SMC2-201ENST00000286398 SEPT8Q92599 483 aa10.21□□□□□ -0.77
SMC2-201ENST00000286398 NCOA2Q15596 1464 aa10.21□□□□□ -0.77
SMC2-201ENST00000286398 E7EVH7 732 aa10.21□□□□□ -0.77
SMC2-201ENST00000286398 SMIM24O75264 130 aa10.21□□□□□ -0.77
SMC2-201ENST00000286398 SH3BGRP55822 239 aaPredicted RBP10.21□□□□□ -0.77
SMC2-201ENST00000286398 PPARDQ03181 441 aa10.21□□□□□ -0.77
SMC2-201ENST00000286398 NAA16Q6N069 864 aaPredicted RBP10.21□□□□□ -0.77
SMC2-201ENST00000286398 CROCCP2Q86T23 111 aa10.21□□□□□ -0.77
SMC2-201ENST00000286398 STX8Q9UNK0 236 aa10.21□□□□□ -0.77
SMC2-201ENST00000286398 SATB1Q01826 763 aa10.21□□□□□ -0.78
SMC2-201ENST00000286398 SF3A3Q12874 501 aaKnown RBP eCLIP10.21□□□□□ -0.78
SMC2-201ENST00000286398 SND1Q7KZF4 910 aaKnown RBP eCLIP10.21□□□□□ -0.78
SMC2-201ENST00000286398 LEO1Q8WVC0 666 aaPredicted RBP10.21□□□□□ -0.78
SMC2-201ENST00000286398 HIP1RO75146 1068 aa10.21□□□□□ -0.78
SMC2-201ENST00000286398 MCM7P33993 719 aa10.21□□□□□ -0.78
SMC2-201ENST00000286398 MGEA5O60502 916 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 MRPS9P82933 396 aaKnown RBP10.2□□□□□ -0.78
SMC2-201ENST00000286398 IMPG2Q9BZV3 1241 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 ZC4H2Q9NQZ6 224 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 ODF2LQ9ULJ1 636 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 PPFIA4O75335 1185 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 AK2P54819 239 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 RNASE9P60153 205 aaKnown RBP10.2□□□□□ -0.78
SMC2-201ENST00000286398 PPP2R5AQ15172 486 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 CCDC14Q49A88 953 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 ABTB1Q969K4 478 aaPredicted RBP10.2□□□□□ -0.78
SMC2-201ENST00000286398 ZNF622Q969S3 477 aaKnown RBP eCLIP10.2□□□□□ -0.785e-7■■■□□ 15.2
SMC2-201ENST00000286398 CCT6AP40227 531 aaKnown RBP10.2□□□□□ -0.78
SMC2-201ENST00000286398 TAOK1Q7L7X3 1001 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 ZNF354CQ86Y25 554 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 TSC1Q92574 1164 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 TBC1D31Q96DN5 1066 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.2□□□□□ -0.78
SMC2-201ENST00000286398 PAK2Q13177 524 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 HS2ST1Q7LGA3 356 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 PIK3R5Q8WYR1 880 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 RIPOR2Q9Y4F9 1068 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 LIG3P49916 1009 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 MUM1Q2TAK8 710 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 KRT23Q9C075 422 aa10.2□□□□□ -0.78
SMC2-201ENST00000286398 ERCC5P28715 1186 aaPredicted RBP10.19□□□□□ -0.78
SMC2-201ENST00000286398 LDHAL6AQ6ZMR3 332 aa10.19□□□□□ -0.78
SMC2-201ENST00000286398 PPP1R1BQ9UD71 204 aaPredicted RBP10.19□□□□□ -0.78
SMC2-201ENST00000286398 STK38LQ9Y2H1 464 aa10.19□□□□□ -0.78
SMC2-201ENST00000286398 RLBP1P12271 317 aa10.19□□□□□ -0.78
SMC2-201ENST00000286398 ZNF75DP51815 510 aa10.19□□□□□ -0.78
SMC2-201ENST00000286398 TBC1D8BQ0IIM8 1120 aa10.19□□□□□ -0.78
SMC2-201ENST00000286398 WDR78Q5VTH9 848 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms