RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ZAP70P43403 619 aa25.06■■□□□ 1.6
YBX3-202ENST00000279550 LARGE1O95461 756 aa25.05■■□□□ 1.6
YBX3-202ENST00000279550 VPS53Q5VIR6 699 aa25.05■■□□□ 1.6
YBX3-202ENST00000279550 TICAM2Q86XR7 235 aa25.05■■□□□ 1.6
YBX3-202ENST00000279550 LIMCH1Q9UPQ0 1083 aa25.05■■□□□ 1.6
YBX3-202ENST00000279550 MAST3O60307 1309 aa25.04■■□□□ 1.6
YBX3-202ENST00000279550 CCDC102BQ68D86 513 aa25.04■■□□□ 1.6
YBX3-202ENST00000279550 ILDR2Q71H61 639 aa25.04■■□□□ 1.6
YBX3-202ENST00000279550 C2CD5Q86YS7 1000 aa25.04■■□□□ 1.6
YBX3-202ENST00000279550 AKAP11Q9UKA4 1901 aa25.04■■□□□ 1.6
YBX3-202ENST00000279550 C10orf71Q711Q0 1435 aa25.04■■□□□ 1.6
YBX3-202ENST00000279550 WTIPA6NIX2 430 aaPredicted RBP25.03■■□□□ 1.6
YBX3-202ENST00000279550 H0YIN7 160 aa25.03■■□□□ 1.6
YBX3-202ENST00000279550 BAG4O95429 457 aaKnown RBP25.03■■□□□ 1.6
YBX3-202ENST00000279550 ALDH1B1P30837 517 aa25.03■■□□□ 1.6
YBX3-202ENST00000279550 RNF20Q5VTR2 975 aa25.03■■□□□ 1.6
YBX3-202ENST00000279550 TMC4Q7Z404 712 aa25.03■■□□□ 1.6
YBX3-202ENST00000279550 SLC51AQ86UW1 340 aa25.03■■□□□ 1.6
YBX3-202ENST00000279550 ZNF512BQ96KM6 892 aaPredicted RBP25.03■■□□□ 1.6
YBX3-202ENST00000279550 U3KPZ7 1027 aaPredicted RBP25.03■■□□□ 1.6
YBX3-202ENST00000279550 M0R2C6 588 aa25.03■■□□□ 1.6
YBX3-202ENST00000279550 TRAK2O60296 914 aa25.03■■□□□ 1.6
YBX3-202ENST00000279550 MCAMP43121 646 aa25.03■■□□□ 1.6
YBX3-202ENST00000279550 PHKA1P46020 1223 aa25.03■■□□□ 1.6
YBX3-202ENST00000279550 TSGA10IPQ3SY00 556 aa25.03■■□□□ 1.6
YBX3-202ENST00000279550 HMG20BQ9P0W2 317 aa25.03■■□□□ 1.6
YBX3-202ENST00000279550 ANKIB1Q9P2G1 1089 aa25.03■■□□□ 1.6
YBX3-202ENST00000279550 PPEF1O14829 653 aaPredicted RBP25.02■■□□□ 1.6
YBX3-202ENST00000279550 ATF5Q9Y2D1 282 aaPredicted RBP25.02■■□□□ 1.6
YBX3-202ENST00000279550 XDHP47989 1333 aa25.01■■□□□ 1.59
YBX3-202ENST00000279550 PSDA5PKW4 1024 aaPredicted RBP25■■□□□ 1.59
YBX3-202ENST00000279550 PSMA5P28066 241 aa25■■□□□ 1.59
YBX3-202ENST00000279550 ARID4AP29374 1257 aaPredicted RBP25■■□□□ 1.59
YBX3-202ENST00000279550 STYK1Q6J9G0 422 aa25■■□□□ 1.59
YBX3-202ENST00000279550 OSBP2Q969R2 916 aa25■■□□□ 1.59
YBX3-202ENST00000279550 ZNF622Q969S3 477 aaKnown RBP eCLIP25■■□□□ 1.592e-15■□□□□ 9.4
YBX3-202ENST00000279550 ZNF804BA4D1E1 1349 aa25■■□□□ 1.59
YBX3-202ENST00000279550 UQCRFS1P1P0C7P4 283 aa24.99■■□□□ 1.59
YBX3-202ENST00000279550 RPS6KB1P23443 525 aa24.99■■□□□ 1.59
YBX3-202ENST00000279550 POLD1P28340 1107 aa24.99■■□□□ 1.59
YBX3-202ENST00000279550 CHRNA5P30532 468 aa24.99■■□□□ 1.59
YBX3-202ENST00000279550 BCAMP50895 628 aa24.99■■□□□ 1.59
YBX3-202ENST00000279550 BLOC1S2Q6QNY1 142 aa24.99■■□□□ 1.59
YBX3-202ENST00000279550 SP8Q8IXZ3 490 aa24.99■■□□□ 1.59
YBX3-202ENST00000279550 TCEANC2Q96MN5 208 aa24.99■■□□□ 1.59
YBX3-202ENST00000279550 LEMD3Q9Y2U8 911 aa24.99■■□□□ 1.59
YBX3-202ENST00000279550 ATP6V0A2Q9Y487 856 aa24.99■■□□□ 1.59
YBX3-202ENST00000279550 LRRC37AA6NMS7 1700 aa24.98■■□□□ 1.59
YBX3-202ENST00000279550 CYP21A2P08686 494 aa24.98■■□□□ 1.59
YBX3-202ENST00000279550 GPSM2P81274 684 aa24.98■■□□□ 1.59
YBX3-202ENST00000279550 ST3GAL1Q11201 340 aa24.98■■□□□ 1.59
YBX3-202ENST00000279550 DSCC1Q9BVC3 393 aa24.98■■□□□ 1.59
YBX3-202ENST00000279550 BRD1O95696 1058 aa24.98■■□□□ 1.59
YBX3-202ENST00000279550 FOXD4L5Q5VV16 416 aaPredicted RBP24.98■■□□□ 1.59
YBX3-202ENST00000279550 FOXD4L4Q8WXT5 416 aaPredicted RBP24.98■■□□□ 1.59
YBX3-202ENST00000279550 PIH1D3Q9NQM4 214 aaKnown RBP24.98■■□□□ 1.59
YBX3-202ENST00000279550 NSFL1CQ9UNZ2 370 aaKnown RBP24.98■■□□□ 1.59
YBX3-202ENST00000279550 MYH7P12883 1935 aa24.97■■□□□ 1.59
YBX3-202ENST00000279550 A0A0G2JLW4 131 aa24.97■■□□□ 1.59
YBX3-202ENST00000279550 CAVIN4Q5BKX8 364 aa24.97■■□□□ 1.59
YBX3-202ENST00000279550 PODXL2Q9NZ53 605 aa24.97■■□□□ 1.59
YBX3-202ENST00000279550 HSPD1P10809 573 aaKnown RBP24.96■■□□□ 1.59
YBX3-202ENST00000279550 KLRK1P26718 216 aa24.96■■□□□ 1.59
YBX3-202ENST00000279550 GYG1P46976 350 aa24.96■■□□□ 1.59
YBX3-202ENST00000279550 STOX1Q6ZVD7 989 aa24.96■■□□□ 1.59
YBX3-202ENST00000279550 CHAMP1Q96JM3 812 aa24.96■■□□□ 1.59
YBX3-202ENST00000279550 TPCN1Q9ULQ1 816 aa24.96■■□□□ 1.59
YBX3-202ENST00000279550 ME3Q16798 604 aa24.95■■□□□ 1.59
YBX3-202ENST00000279550 CCDC83Q8IWF9 413 aa24.95■■□□□ 1.59
YBX3-202ENST00000279550 CNKSR1Q969H4 720 aa24.95■■□□□ 1.59
YBX3-202ENST00000279550 FAM84BQ96KN1 310 aaPredicted RBP24.95■■□□□ 1.59
YBX3-202ENST00000279550 ZSCAN31Q96LW9 406 aaPredicted RBP24.95■■□□□ 1.59
YBX3-202ENST00000279550 ALDH8A1Q9H2A2 487 aaPredicted RBP24.95■■□□□ 1.59
YBX3-202ENST00000279550 FOXP2O15409 715 aa24.95■■□□□ 1.58
YBX3-202ENST00000279550 ZFYP08048 801 aaPredicted RBP24.95■■□□□ 1.58
YBX3-202ENST00000279550 RASGRF1Q13972 1273 aa24.95■■□□□ 1.58
YBX3-202ENST00000279550 TOB2Q14106 344 aaPredicted RBP24.95■■□□□ 1.58
YBX3-202ENST00000279550 KRT32Q14532 448 aa24.95■■□□□ 1.58
YBX3-202ENST00000279550 WASHC4Q2M389 1173 aa24.95■■□□□ 1.58
YBX3-202ENST00000279550 SGIP1Q9BQI5 828 aa24.95■■□□□ 1.58
YBX3-202ENST00000279550 GGA1Q9UJY5 639 aa24.95■■□□□ 1.58
YBX3-202ENST00000279550 IRS2Q9Y4H2 1338 aa24.94■■□□□ 1.58
YBX3-202ENST00000279550 MYO5AQ9Y4I1 1855 aaKnown RBP24.94■■□□□ 1.58
YBX3-202ENST00000279550 DTNBO60941 627 aa24.94■■□□□ 1.58
YBX3-202ENST00000279550 UFL1O94874 794 aa24.94■■□□□ 1.58
YBX3-202ENST00000279550 ATP2B4P23634 1241 aa24.94■■□□□ 1.58
YBX3-202ENST00000279550 LRRFIP1Q32MZ4 808 aaKnown RBP24.94■■□□□ 1.58
YBX3-202ENST00000279550 FBXO33Q7Z6M2 555 aa24.94■■□□□ 1.58
YBX3-202ENST00000279550 VPS37DQ86XT2 251 aa24.94■■□□□ 1.58
YBX3-202ENST00000279550 MCTP1Q6DN14 999 aa24.93■■□□□ 1.58
YBX3-202ENST00000279550 SPATA5Q8NB90 893 aa24.93■■□□□ 1.58
YBX3-202ENST00000279550 APPBP2Q92624 585 aa24.93■■□□□ 1.58
YBX3-202ENST00000279550 NEK1Q96PY6 1258 aa24.93■■□□□ 1.58
YBX3-202ENST00000279550 GZF1Q9H116 711 aaPredicted RBP24.93■■□□□ 1.58
YBX3-202ENST00000279550 SH2B1Q9NRF2 756 aaPredicted RBP24.93■■□□□ 1.58
YBX3-202ENST00000279550 GNL3LQ9NVN8 582 aaKnown RBP24.93■■□□□ 1.58
YBX3-202ENST00000279550 KIF13BQ9NQT8 1826 aa24.93■■□□□ 1.58
YBX3-202ENST00000279550 TXNRD3Q86VQ6 643 aa24.92■■□□□ 1.58
YBX3-202ENST00000279550 NECAB1Q8N987 351 aa24.92■■□□□ 1.58
YBX3-202ENST00000279550 PUS7LQ9H0K6 701 aaKnown RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms