RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 PI4K2BQ8TCG2 481 aa12.2□□□□□ -0.46
UPF3B-201ENST00000276201 RILPL2Q969X0 211 aa12.2□□□□□ -0.46
UPF3B-201ENST00000276201 RBM17Q96I25 401 aaKnown RBP12.2□□□□□ -0.46
UPF3B-201ENST00000276201 CRAMP1Q96RY5 1269 aa12.2□□□□□ -0.46
UPF3B-201ENST00000276201 SMC3Q9UQE7 1217 aa12.2□□□□□ -0.46
UPF3B-201ENST00000276201 PNMA6EA0A0J9YXQ4 647 aa12.2□□□□□ -0.46
UPF3B-201ENST00000276201 ALDH1B1P30837 517 aa12.2□□□□□ -0.46
UPF3B-201ENST00000276201 RASSF7Q02833 373 aa12.2□□□□□ -0.46
UPF3B-201ENST00000276201 GCKRQ14397 625 aa12.2□□□□□ -0.46
UPF3B-201ENST00000276201 PPP4R3BQ5MIZ7 849 aa12.2□□□□□ -0.46
UPF3B-201ENST00000276201 BEND3Q5T5X7 828 aa12.2□□□□□ -0.46
UPF3B-201ENST00000276201 RBM43Q6ZSC3 357 aaKnown RBP12.2□□□□□ -0.46
UPF3B-201ENST00000276201 RUFY3Q7L099 469 aa12.2□□□□□ -0.46
UPF3B-201ENST00000276201 FAM200AQ8TCP9 573 aa12.2□□□□□ -0.46
UPF3B-201ENST00000276201 UPF3BQ9BZI7 483 aaKnown RBP12.2□□□□□ -0.46
UPF3B-201ENST00000276201 GDPD2Q9HCC8 539 aa12.2□□□□□ -0.46
UPF3B-201ENST00000276201 MTMR6Q9Y217 621 aa12.2□□□□□ -0.46
UPF3B-201ENST00000276201 FER1L6Q2WGJ9 1857 aa12.19□□□□□ -0.46
UPF3B-201ENST00000276201 NFKBIEO00221 500 aa12.19□□□□□ -0.46
UPF3B-201ENST00000276201 OLFM4Q6UX06 510 aa12.19□□□□□ -0.46
UPF3B-201ENST00000276201 SLC51AQ86UW1 340 aa12.19□□□□□ -0.46
UPF3B-201ENST00000276201 ZNF830Q96NB3 372 aaPredicted RBP12.19□□□□□ -0.46
UPF3B-201ENST00000276201 TTC41PQ6P2S7 1318 aa12.19□□□□□ -0.46
UPF3B-201ENST00000276201 CDHR2Q9BYE9 1310 aa12.19□□□□□ -0.46
UPF3B-201ENST00000276201 H7C1W4 665 aa12.19□□□□□ -0.46
UPF3B-201ENST00000276201 RIOK3O14730 519 aaKnown RBP12.19□□□□□ -0.46
UPF3B-201ENST00000276201 CAVIN2O95810 425 aa12.19□□□□□ -0.46
UPF3B-201ENST00000276201 PRELPP51888 382 aa12.19□□□□□ -0.46
UPF3B-201ENST00000276201 AK2P54819 239 aa12.19□□□□□ -0.46
UPF3B-201ENST00000276201 SF3B3Q15393 1217 aaKnown RBP12.19□□□□□ -0.46
UPF3B-201ENST00000276201 ATP2B3Q16720 1220 aa12.19□□□□□ -0.46
UPF3B-201ENST00000276201 CNTROBQ8N137 903 aa12.19□□□□□ -0.46
UPF3B-201ENST00000276201 ALDH8A1Q9H2A2 487 aaPredicted RBP12.19□□□□□ -0.46
UPF3B-201ENST00000276201 OGFRQ9NZT2 677 aa12.19□□□□□ -0.46
UPF3B-201ENST00000276201 COL4A1P02462 1669 aa12.19□□□□□ -0.46
UPF3B-201ENST00000276201 SBF1O95248 1867 aa12.18□□□□□ -0.46
UPF3B-201ENST00000276201 SMTNL1A8MU46 457 aa12.18□□□□□ -0.46
UPF3B-201ENST00000276201 CDC25BP30305 580 aa12.18□□□□□ -0.46
UPF3B-201ENST00000276201 UBE3BQ7Z3V4 1068 aa12.18□□□□□ -0.46
UPF3B-201ENST00000276201 PYCARDQ9ULZ3 195 aa12.18□□□□□ -0.46
UPF3B-201ENST00000276201 TAF1P21675 1872 aa12.18□□□□□ -0.46
UPF3B-201ENST00000276201 SNED1Q8TER0 1413 aa12.18□□□□□ -0.46
UPF3B-201ENST00000276201 AP5Z1O43299 807 aa12.18□□□□□ -0.46
UPF3B-201ENST00000276201 FAM193AP78312 1265 aa12.18□□□□□ -0.46
UPF3B-201ENST00000276201 GABPB1Q06547 395 aaPredicted RBP12.18□□□□□ -0.46
UPF3B-201ENST00000276201 HSP90AB4PQ58FF6 505 aa12.18□□□□□ -0.46
UPF3B-201ENST00000276201 SOGA3Q5TF21 947 aa12.18□□□□□ -0.46
UPF3B-201ENST00000276201 MYH15Q9Y2K3 1946 aa12.17□□□□□ -0.46
UPF3B-201ENST00000276201 PPEF1O14829 653 aaPredicted RBP12.17□□□□□ -0.46
UPF3B-201ENST00000276201 PDE8AO60658 829 aa12.17□□□□□ -0.46
UPF3B-201ENST00000276201 CASP7P55210 303 aa12.17□□□□□ -0.46
UPF3B-201ENST00000276201 CCDC93Q567U6 631 aa12.17□□□□□ -0.46
UPF3B-201ENST00000276201 SLC4A10Q6U841 1118 aa12.17□□□□□ -0.46
UPF3B-201ENST00000276201 DDX46Q7L014 1031 aaKnown RBP12.17□□□□□ -0.46
UPF3B-201ENST00000276201 RUFY2Q8WXA3 655 aa12.17□□□□□ -0.46
UPF3B-201ENST00000276201 KIF1BPQ96EK5 621 aa12.17□□□□□ -0.46
UPF3B-201ENST00000276201 ZSWIM6Q9HCJ5 1215 aa12.17□□□□□ -0.46
UPF3B-201ENST00000276201 PAXBP1Q9Y5B6 917 aa12.17□□□□□ -0.46
UPF3B-201ENST00000276201 HSP90B1P14625 803 aaKnown RBP12.16□□□□□ -0.46
UPF3B-201ENST00000276201 C9orf131Q5VYM1 1079 aa12.16□□□□□ -0.46
UPF3B-201ENST00000276201 IL25Q9H293 177 aa12.16□□□□□ -0.46
UPF3B-201ENST00000276201 SNRKQ9NRH2 765 aa12.16□□□□□ -0.46
UPF3B-201ENST00000276201 LTBP3Q9NS15 1303 aa12.16□□□□□ -0.46
UPF3B-201ENST00000276201 GRAPQ13588 217 aa12.16□□□□□ -0.46
UPF3B-201ENST00000276201 TSHZ3Q63HK5 1081 aa12.16□□□□□ -0.46
UPF3B-201ENST00000276201 TDRD7Q8NHU6 1098 aaKnown RBP12.16□□□□□ -0.46
UPF3B-201ENST00000276201 GRAPLQ8TC17 118 aaPredicted RBP12.16□□□□□ -0.46
UPF3B-201ENST00000276201 USP44Q9H0E7 712 aa12.16□□□□□ -0.46
UPF3B-201ENST00000276201 LRRFIP2Q9Y608 721 aaKnown RBP12.16□□□□□ -0.46
UPF3B-201ENST00000276201 ALDH1L1O75891 902 aa12.15□□□□□ -0.46
UPF3B-201ENST00000276201 CTSWP56202 376 aa12.15□□□□□ -0.46
UPF3B-201ENST00000276201 MAP3K11Q16584 847 aa12.15□□□□□ -0.46
UPF3B-201ENST00000276201 GIMAP6Q6P9H5 292 aa12.15□□□□□ -0.46
UPF3B-201ENST00000276201 PLA2G4DQ86XP0 818 aa12.15□□□□□ -0.46
UPF3B-201ENST00000276201 TAOK3Q9H2K8 898 aa12.15□□□□□ -0.46
UPF3B-201ENST00000276201 DDX19AQ9NUU7 478 aaKnown RBP12.15□□□□□ -0.46
UPF3B-201ENST00000276201 RNF181Q9P0P0 153 aa12.15□□□□□ -0.46
UPF3B-201ENST00000276201 CGNQ9P2M7 1197 aaKnown RBP12.15□□□□□ -0.46
UPF3B-201ENST00000276201 MYH3P11055 1940 aa12.15□□□□□ -0.46
UPF3B-201ENST00000276201 UBTFL1P0CB47 393 aaPredicted RBP12.15□□□□□ -0.46
UPF3B-201ENST00000276201 LMNB1P20700 586 aa12.15□□□□□ -0.46
UPF3B-201ENST00000276201 PDCP20941 246 aa12.15□□□□□ -0.46
UPF3B-201ENST00000276201 NOL8Q76FK4 1167 aaKnown RBP12.15□□□□□ -0.46
UPF3B-201ENST00000276201 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
UPF3B-201ENST00000276201 RHPN1Q8TCX5 695 aa12.15□□□□□ -0.46
UPF3B-201ENST00000276201 PRDM10Q9NQV6 1147 aa12.15□□□□□ -0.46
UPF3B-201ENST00000276201 KCND1Q9NSA2 647 aa12.15□□□□□ -0.46
UPF3B-201ENST00000276201 NEMFO60524 1076 aa12.14□□□□□ -0.47
UPF3B-201ENST00000276201 BBOX1O75936 387 aa12.14□□□□□ -0.47
UPF3B-201ENST00000276201 GJB2P29033 226 aa12.14□□□□□ -0.47
UPF3B-201ENST00000276201 KRT85P78386 507 aa12.14□□□□□ -0.47
UPF3B-201ENST00000276201 CBX1P83916 185 aa12.14□□□□□ -0.47
UPF3B-201ENST00000276201 CCDC152Q4G0S7 254 aa12.14□□□□□ -0.47
UPF3B-201ENST00000276201 RTKN2Q8IZC4 609 aa12.14□□□□□ -0.47
UPF3B-201ENST00000276201 C17orf53Q8N3J3 647 aaPredicted RBP12.14□□□□□ -0.47
UPF3B-201ENST00000276201 ZNF784Q8NCA9 323 aaPredicted RBP12.14□□□□□ -0.47
UPF3B-201ENST00000276201 CELF1Q92879 486 aaKnown RBP12.14□□□□□ -0.47
UPF3B-201ENST00000276201 CCDC85AQ96PX6 553 aaPredicted RBP12.14□□□□□ -0.47
UPF3B-201ENST00000276201 PLA2G12BQ9BX93 195 aa12.14□□□□□ -0.47
UPF3B-201ENST00000276201 SEC31BQ9NQW1 1179 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms