RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 ZNF608Q9ULD9 1512 aaPredicted RBP13.47□□□□□ -0.25
SHPRH-201ENST00000275233 CREB3L3Q68CJ9 461 aa13.47□□□□□ -0.25
SHPRH-201ENST00000275233 MBD4O95243 580 aa13.46□□□□□ -0.25
SHPRH-201ENST00000275233 AK2P54819 239 aa13.46□□□□□ -0.25
SHPRH-201ENST00000275233 POLKQ9UBT6 870 aa13.46□□□□□ -0.25
SHPRH-201ENST00000275233 DNAI1Q9UI46 699 aa13.46□□□□□ -0.25
SHPRH-201ENST00000275233 ASXL1Q8IXJ9 1541 aa13.46□□□□□ -0.25
SHPRH-201ENST00000275233 CTAGE1Q96RT6 745 aa13.46□□□□□ -0.25
SHPRH-201ENST00000275233 UHRF1BP1LA0JNW5 1464 aa13.46□□□□□ -0.25
SHPRH-201ENST00000275233 LAMC3Q9Y6N6 1575 aa13.46□□□□□ -0.25
SHPRH-201ENST00000275233 CPA1P15085 419 aa13.46□□□□□ -0.25
SHPRH-201ENST00000275233 ZNF174Q15697 407 aa13.46□□□□□ -0.25
SHPRH-201ENST00000275233 LMTK3Q96Q04 1460 aa13.46□□□□□ -0.25
SHPRH-201ENST00000275233 SPTLC2O15270 562 aa13.46□□□□□ -0.26
SHPRH-201ENST00000275233 KARSQ15046 597 aaKnown RBP13.46□□□□□ -0.26
SHPRH-201ENST00000275233 LRSAM1Q6UWE0 723 aa13.46□□□□□ -0.26
SHPRH-201ENST00000275233 F13A1P00488 732 aa13.46□□□□□ -0.26
SHPRH-201ENST00000275233 HDAC1Q13547 482 aaPredicted RBP13.46□□□□□ -0.26
SHPRH-201ENST00000275233 FCHSD1Q86WN1 690 aa13.46□□□□□ -0.26
SHPRH-201ENST00000275233 PLCH2O75038 1416 aa13.46□□□□□ -0.26
SHPRH-201ENST00000275233 POTEB2H3BUK9 544 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 CCDC155Q8N6L0 562 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 SELENOOQ9BVL4 669 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 PARP1P09874 1014 aaKnown RBP13.45□□□□□ -0.26
SHPRH-201ENST00000275233 MICALCLQ6ZW33 695 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 MAEAQ7L5Y9 396 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 RNMTO43148 476 aaKnown RBP13.45□□□□□ -0.26
SHPRH-201ENST00000275233 SYT1P21579 422 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 MXRA7P84157 204 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 ZNF594Q96JF6 807 aaPredicted RBP13.45□□□□□ -0.26
SHPRH-201ENST00000275233 GOLGA6L9A6NEM1 432 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 GCP02774 474 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 SKILP12757 684 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 GNAT2P19087 354 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 LETM2Q2VYF4 491 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 EYA1Q99502 592 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 BMP15O95972 392 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 CKAP4Q07065 602 aaKnown RBP13.45□□□□□ -0.26
SHPRH-201ENST00000275233 RAPGEF1Q13905 1077 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 CCDC186Q7Z3E2 898 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 TEX11Q8IYF3 940 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 DDX17Q92841 729 aaKnown RBP13.45□□□□□ -0.26
SHPRH-201ENST00000275233 IQCGQ9H095 443 aaKnown RBP13.45□□□□□ -0.26
SHPRH-201ENST00000275233 ARMT1Q9H993 441 aa13.45□□□□□ -0.26
SHPRH-201ENST00000275233 KRT5P13647 590 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 TIMM10P62072 90 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 FNBP4Q8N3X1 1017 aaPredicted RBP13.44□□□□□ -0.26
SHPRH-201ENST00000275233 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.44□□□□□ -0.26
SHPRH-201ENST00000275233 V9GYY5 206 aaPredicted RBP13.44□□□□□ -0.26
SHPRH-201ENST00000275233 PTPDC1A2A3K4 754 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 CEP85Q6P2H3 762 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 DTHD1Q6ZMT9 781 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 ABCC1P33527 1531 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 RPRD2Q5VT52 1461 aaKnown RBP13.44□□□□□ -0.26
SHPRH-201ENST00000275233 VWA3AA6NCI4 1184 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 DDX39AO00148 427 aaKnown RBP13.44□□□□□ -0.26
SHPRH-201ENST00000275233 TRAF1Q13077 416 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 KLHDC4Q8TBB5 520 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 ANKRD2Q9GZV1 360 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 FAM170AA1A519 330 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 CNBD1Q8NA66 436 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 PHACTR3Q96KR7 559 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 EYA3Q99504 573 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 PLCG2P16885 1265 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 EHBP1Q8NDI1 1231 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 TTC12Q9H892 705 aaPredicted RBP13.44□□□□□ -0.26
SHPRH-201ENST00000275233 CCNL1Q9UK58 526 aaPredicted RBP13.44□□□□□ -0.26
SHPRH-201ENST00000275233 GINS2Q9Y248 185 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 B4E1Z4 1266 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 BBXQ8WY36 941 aaPredicted RBP13.44□□□□□ -0.26
SHPRH-201ENST00000275233 PLVAPQ9BX97 442 aa13.44□□□□□ -0.26
SHPRH-201ENST00000275233 RALGAPBQ86X10 1494 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 TAF5LO75529 589 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 ITGA6P23229 1130 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 HOXC9P31274 260 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 NEK11Q8NG66 645 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 PPM1EQ8WY54 764 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 ARHGAP45Q92619 1136 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 LINS1Q8NG48 757 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 LRRC45Q96CN5 670 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 DTNBO60941 627 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 GUCA1BQ9UMX6 200 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 PCDH11XQ9BZA7 1347 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 PCDH11YQ9BZA8 1340 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 CALML3P27482 149 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 CCDC25Q86WR0 208 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 SELENOSQ9BQE4 189 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 MCM6Q14566 821 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 LZTFL1Q9NQ48 299 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 PICK1Q9NRD5 415 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 RASAL2Q9UJF2 1139 aa13.43□□□□□ -0.26
SHPRH-201ENST00000275233 TCP10Q12799 353 aa13.42□□□□□ -0.26
SHPRH-201ENST00000275233 KRT9P35527 623 aa13.42□□□□□ -0.26
SHPRH-201ENST00000275233 KLHL40Q2TBA0 621 aa13.42□□□□□ -0.26
SHPRH-201ENST00000275233 SPECC1LQ69YQ0 1117 aa13.42□□□□□ -0.26
SHPRH-201ENST00000275233 CCDC171Q6TFL3 1326 aa13.42□□□□□ -0.26
SHPRH-201ENST00000275233 MYCLP12524 364 aaPredicted RBP13.42□□□□□ -0.26
SHPRH-201ENST00000275233 FAM98CQ17RN3 349 aaKnown RBP13.42□□□□□ -0.26
SHPRH-201ENST00000275233 RUFY3Q7L099 469 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms