RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 MAP3K19Q56UN5 1328 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 CTDNEP1O95476 244 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 PSMA5P28066 241 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 GNG11P61952 73 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 GUCY1B3Q02153 619 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 SCRN1Q12765 414 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 TOGARAM2Q6ZUX3 1019 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 IRX2Q9BZI1 471 aaPredicted RBP10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 NAT10Q9H0A0 1025 aaKnown RBP10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 ANKZF1Q9H8Y5 726 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 PCDHA7Q9UN72 937 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 PHF8Q9UPP1 1060 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 PA2G4Q9UQ80 394 aaKnown RBP10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 RGPD1P0DJD0 1748 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 CHGBP05060 677 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 IVLP07476 585 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 ME1P48163 572 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 ABTB2Q8N961 1025 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 ALDH8A1Q9H2A2 487 aaPredicted RBP10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 ECHDC1Q9NTX5 307 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 KIAA1468Q9P260 1216 aa10.62□□□□□ -0.71
HMGCLL1-201ENST00000274901 A0A0U1RQJ8 604 aa10.61□□□□□ -0.71
HMGCLL1-201ENST00000274901 TXLNAP40222 546 aa10.61□□□□□ -0.71
HMGCLL1-201ENST00000274901 ANKRD1Q15327 319 aa10.61□□□□□ -0.71
HMGCLL1-201ENST00000274901 PROSER2Q86WR7 435 aaPredicted RBP10.61□□□□□ -0.71
HMGCLL1-201ENST00000274901 ATRIPQ8WXE1 791 aa10.61□□□□□ -0.71
HMGCLL1-201ENST00000274901 SDF4Q9BRK5 362 aa10.61□□□□□ -0.71
HMGCLL1-201ENST00000274901 INTS13Q9NVM9 706 aa10.61□□□□□ -0.71
HMGCLL1-201ENST00000274901 CCDC151A5D8V7 595 aa10.61□□□□□ -0.71
HMGCLL1-201ENST00000274901 PHACTR2O75167 634 aa10.61□□□□□ -0.71
HMGCLL1-201ENST00000274901 PLEKHO1Q53GL0 409 aaPredicted RBP10.61□□□□□ -0.71
HMGCLL1-201ENST00000274901 KAT2BQ92831 832 aa10.61□□□□□ -0.71
HMGCLL1-201ENST00000274901 BPIFA3Q9BQP9 254 aa10.61□□□□□ -0.71
HMGCLL1-201ENST00000274901 BICC1Q9H694 974 aaKnown RBP10.61□□□□□ -0.71
HMGCLL1-201ENST00000274901 TLR7Q9NYK1 1049 aaKnown RBP10.61□□□□□ -0.71
HMGCLL1-201ENST00000274901 MED23Q9ULK4 1368 aa10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 NALCNQ8IZF0 1738 aa10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 OS9Q13438 667 aaPredicted RBP10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 NOM1Q5C9Z4 860 aaKnown RBP10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 Q6ZUG5 572 aa10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 SMARCC2Q8TAQ2 1214 aa10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 GOLGA1Q92805 767 aa10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 EVI5LQ96CN4 794 aa10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 ORAI2Q96SN7 254 aa10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 MPHOSPH8Q99549 860 aa10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 DESI2Q9BSY9 194 aa10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 PXDNLA1KZ92 1463 aa10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 KARSQ15046 597 aaKnown RBP10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 ANKARQ7Z5J8 1434 aa10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 NSUN7Q8NE18 718 aaKnown RBP10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 EDC3Q96F86 508 aaKnown RBP10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 ABCB6Q9NP58 842 aa10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 SNRKQ9NRH2 765 aa10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 PUF60Q9UHX1 559 aaKnown RBP10.6□□□□□ -0.71
HMGCLL1-201ENST00000274901 FMN2Q9NZ56 1722 aa10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 CPP00450 1065 aa10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 HSP90B1P14625 803 aaKnown RBP10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 AMPHP49418 695 aa10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 CNNM3Q8NE01 707 aa10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 PPM1EQ8WY54 764 aa10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 MRPS27Q92552 414 aaKnown RBP10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 CLIC6Q96NY7 704 aa10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 MRPL44Q9H9J2 332 aaKnown RBP10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 CCP110O43303 1012 aa10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 GSCP56915 257 aaPredicted RBP10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 BRD3Q15059 726 aa10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 SKIDA1Q1XH10 827 aa10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 AACSQ86V21 672 aa10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 VSTM4Q8IW00 320 aa10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 SUGP1Q8IWZ8 645 aaKnown RBP10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 L1RE1Q9UN81 338 aa10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 USP31Q70CQ4 1352 aa10.59□□□□□ -0.71
HMGCLL1-201ENST00000274901 UBASH3AP57075 661 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 NLRP12P59046 1061 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 MTF1Q14872 753 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 MCTP2Q6DN12 878 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 CLASRPQ8N2M8 674 aaKnown RBP10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 LTV1Q96GA3 475 aaPredicted RBP10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 CXorf56Q9H5V9 222 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 NCOA5Q9HCD5 579 aaKnown RBP10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 CLIC4Q9Y696 253 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 JCADQ9P266 1359 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 PTPDC1A2A3K4 754 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 NRDCO43847 1150 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 CHMP4BP1P59074 171 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 MTX1Q13505 466 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 HSP90AA4PQ58FG1 418 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 OTUD7BQ6GQQ9 843 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 NAA16Q6N069 864 aaPredicted RBP10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 LMOD2Q6P5Q4 547 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 MMS22LQ6ZRQ5 1243 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 ERC1Q8IUD2 1116 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 CCDC8Q9H0W5 538 aaPredicted RBP10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 BOLA2Q9H3K6 86 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 DEF6Q9H4E7 631 aa10.58□□□□□ -0.72
HMGCLL1-201ENST00000274901 LRRIQ3A6PVS8 624 aaPredicted RBP10.57□□□□□ -0.72
HMGCLL1-201ENST00000274901 ZSCAN12O43309 604 aa10.57□□□□□ -0.72
HMGCLL1-201ENST00000274901 TAF5LO75529 589 aa10.57□□□□□ -0.72
HMGCLL1-201ENST00000274901 USP5P45974 858 aa10.57□□□□□ -0.72
HMGCLL1-201ENST00000274901 VSNL1P62760 191 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms