RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 EXOSC10Q01780 885 aaKnown RBP19.76■□□□□ 0.75
CCDC40-201ENST00000269318 KLHL40Q2TBA0 621 aa19.76■□□□□ 0.75
CCDC40-201ENST00000269318 TPTE2Q6XPS3 522 aa19.76■□□□□ 0.75
CCDC40-201ENST00000269318 Q6ZUG5 572 aa19.76■□□□□ 0.75
CCDC40-201ENST00000269318 CELF1Q92879 486 aaKnown RBP19.76■□□□□ 0.75
CCDC40-201ENST00000269318 ZNF804BA4D1E1 1349 aa19.75■□□□□ 0.75
CCDC40-201ENST00000269318 FGAP02671 866 aa19.75■□□□□ 0.75
CCDC40-201ENST00000269318 RFC4P35249 363 aa19.75■□□□□ 0.75
CCDC40-201ENST00000269318 NLRP3Q96P20 1036 aa19.75■□□□□ 0.75
CCDC40-201ENST00000269318 ZNF532Q9HCE3 1301 aa19.75■□□□□ 0.75
CCDC40-201ENST00000269318 MINPP1Q9UNW1 487 aa19.75■□□□□ 0.75
CCDC40-201ENST00000269318 BRWD3Q6RI45 1802 aa19.75■□□□□ 0.75
CCDC40-201ENST00000269318 STX6O43752 255 aa19.75■□□□□ 0.75
CCDC40-201ENST00000269318 AGXT2Q9BYV1 514 aa19.75■□□□□ 0.75
CCDC40-201ENST00000269318 PHF14O94880 888 aa19.74■□□□□ 0.75
CCDC40-201ENST00000269318 ZSCAN22P10073 491 aaPredicted RBP19.74■□□□□ 0.75
CCDC40-201ENST00000269318 ADRA2BP18089 450 aa19.74■□□□□ 0.75
CCDC40-201ENST00000269318 UBE4AQ14139 1066 aa19.74■□□□□ 0.75
CCDC40-201ENST00000269318 KRT27Q7Z3Y8 459 aa19.74■□□□□ 0.75
CCDC40-201ENST00000269318 PRPF40AO75400 957 aaKnown RBP19.73■□□□□ 0.75
CCDC40-201ENST00000269318 IMMTQ16891 758 aaKnown RBP19.73■□□□□ 0.75
CCDC40-201ENST00000269318 GTF3C6Q969F1 213 aa19.73■□□□□ 0.75
CCDC40-201ENST00000269318 DDX49Q9Y6V7 483 aaKnown RBP19.73■□□□□ 0.75
CCDC40-201ENST00000269318 UBR3Q6ZT12 1888 aa19.73■□□□□ 0.75
CCDC40-201ENST00000269318 TNRC6CQ9HCJ0 1690 aaKnown RBP19.72■□□□□ 0.75
CCDC40-201ENST00000269318 FSD2A1L4K1 749 aa19.72■□□□□ 0.75
CCDC40-201ENST00000269318 DTNBO60941 627 aa19.72■□□□□ 0.75
CCDC40-201ENST00000269318 RPS8P62241 208 aaKnown RBP19.72■□□□□ 0.75
CCDC40-201ENST00000269318 MAP3K12Q12852 859 aa19.72■□□□□ 0.75
CCDC40-201ENST00000269318 LRRC2Q9BYS8 371 aa19.72■□□□□ 0.75
CCDC40-201ENST00000269318 CARMIL3Q8ND23 1372 aa19.72■□□□□ 0.75
CCDC40-201ENST00000269318 WTIPA6NIX2 430 aaPredicted RBP19.72■□□□□ 0.75
CCDC40-201ENST00000269318 TM4SF1P30408 202 aa19.72■□□□□ 0.75
CCDC40-201ENST00000269318 NFIXQ14938 502 aa19.72■□□□□ 0.75
CCDC40-201ENST00000269318 SLC27A3Q5K4L6 730 aa19.72■□□□□ 0.75
CCDC40-201ENST00000269318 CCDC24Q8N4L8 307 aa19.72■□□□□ 0.75
CCDC40-201ENST00000269318 BRF1Q92994 677 aa19.72■□□□□ 0.75
CCDC40-201ENST00000269318 MTMR6Q9Y217 621 aa19.72■□□□□ 0.75
CCDC40-201ENST00000269318 EP400Q96L91 3159 aa19.71■□□□□ 0.75
CCDC40-201ENST00000269318 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.71■□□□□ 0.75
CCDC40-201ENST00000269318 FBXL16Q8N461 479 aa19.71■□□□□ 0.75
CCDC40-201ENST00000269318 STRBPQ96SI9 672 aaKnown RBP19.71■□□□□ 0.75
CCDC40-201ENST00000269318 F13A1P00488 732 aa19.7■□□□□ 0.74
CCDC40-201ENST00000269318 HAND2P61296 217 aa19.7■□□□□ 0.74
CCDC40-201ENST00000269318 STK3Q13188 491 aa19.7■□□□□ 0.74
CCDC40-201ENST00000269318 MAGEB6Q8N7X4 407 aa19.7■□□□□ 0.74
CCDC40-201ENST00000269318 GYG1P46976 350 aa19.7■□□□□ 0.74
CCDC40-201ENST00000269318 COL1A1P02452 1464 aaPredicted RBP19.69■□□□□ 0.74
CCDC40-201ENST00000269318 GPT2Q8TD30 523 aa19.69■□□□□ 0.74
CCDC40-201ENST00000269318 NBPF3Q9H094 633 aa19.69■□□□□ 0.74
CCDC40-201ENST00000269318 ZNF213O14771 459 aa19.68■□□□□ 0.74
CCDC40-201ENST00000269318 PFKFB2O60825 505 aa19.68■□□□□ 0.74
CCDC40-201ENST00000269318 TRIM37O94972 964 aa19.68■□□□□ 0.74
CCDC40-201ENST00000269318 PDIA4P13667 645 aaKnown RBP19.68■□□□□ 0.74
CCDC40-201ENST00000269318 MB21D2Q8IYB1 491 aaPredicted RBP19.68■□□□□ 0.74
CCDC40-201ENST00000269318 AIDAQ96BJ3 306 aa19.68■□□□□ 0.74
CCDC40-201ENST00000269318 FGD1P98174 961 aa19.68■□□□□ 0.74
CCDC40-201ENST00000269318 FAM84BQ96KN1 310 aaPredicted RBP19.68■□□□□ 0.74
CCDC40-201ENST00000269318 GNL3LQ9NVN8 582 aaKnown RBP19.68■□□□□ 0.74
CCDC40-201ENST00000269318 ZMYM6O95789 1325 aa19.67■□□□□ 0.74
CCDC40-201ENST00000269318 EVCP57679 992 aa19.67■□□□□ 0.74
CCDC40-201ENST00000269318 SCRN1Q12765 414 aa19.67■□□□□ 0.74
CCDC40-201ENST00000269318 ALX1Q15699 326 aa19.67■□□□□ 0.74
CCDC40-201ENST00000269318 GOLGA6L3A6NEY3 463 aa19.66■□□□□ 0.74
CCDC40-201ENST00000269318 GYS1P13807 737 aa19.66■□□□□ 0.74
CCDC40-201ENST00000269318 PDCP20941 246 aa19.66■□□□□ 0.74
CCDC40-201ENST00000269318 APOBRQ0VD83 1088 aa19.66■□□□□ 0.74
CCDC40-201ENST00000269318 CAVIN4Q5BKX8 364 aa19.66■□□□□ 0.74
CCDC40-201ENST00000269318 LARP1BQ659C4 914 aaKnown RBP19.66■□□□□ 0.74
CCDC40-201ENST00000269318 CHST3Q7LGC8 479 aa19.66■□□□□ 0.74
CCDC40-201ENST00000269318 FBXO33Q7Z6M2 555 aa19.66■□□□□ 0.74
CCDC40-201ENST00000269318 TMEM87AQ8NBN3 555 aa19.66■□□□□ 0.74
CCDC40-201ENST00000269318 ANKRD2Q9GZV1 360 aa19.66■□□□□ 0.74
CCDC40-201ENST00000269318 IQSEC3Q9UPP2 1182 aaPredicted RBP19.66■□□□□ 0.74
CCDC40-201ENST00000269318 MBD4O95243 580 aa19.66■□□□□ 0.74
CCDC40-201ENST00000269318 FOXD4L6Q3SYB3 417 aaPredicted RBP19.66■□□□□ 0.74
CCDC40-201ENST00000269318 FOXD4L3Q6VB84 417 aaPredicted RBP19.66■□□□□ 0.74
CCDC40-201ENST00000269318 CNBD1Q8NA66 436 aa19.66■□□□□ 0.74
CCDC40-201ENST00000269318 WDR19Q8NEZ3 1342 aa19.66■□□□□ 0.74
CCDC40-201ENST00000269318 PATL2C9JE40 543 aaKnown RBP19.65■□□□□ 0.74
CCDC40-201ENST00000269318 JAK2O60674 1132 aa19.65■□□□□ 0.74
CCDC40-201ENST00000269318 L1TD1Q5T7N2 865 aaKnown RBP19.65■□□□□ 0.74
CCDC40-201ENST00000269318 NCOA7Q8NI08 942 aa19.65■□□□□ 0.74
CCDC40-201ENST00000269318 SMARCC2Q8TAQ2 1214 aa19.65■□□□□ 0.74
CCDC40-201ENST00000269318 ZNF274Q96GC6 653 aaPredicted RBP19.65■□□□□ 0.74
CCDC40-201ENST00000269318 LLPHQ9BRT6 129 aaKnown RBP19.65■□□□□ 0.74
CCDC40-201ENST00000269318 EPB41L4AQ9HCS5 686 aaPredicted RBP19.65■□□□□ 0.74
CCDC40-201ENST00000269318 ISY1Q9ULR0 285 aaKnown RBP19.65■□□□□ 0.74
CCDC40-201ENST00000269318 ATP6V1DQ9Y5K8 247 aa19.65■□□□□ 0.74
CCDC40-201ENST00000269318 PNPLA7Q6ZV29 1317 aa19.65■□□□□ 0.74
CCDC40-201ENST00000269318 KLRK1P26718 216 aa19.64■□□□□ 0.74
CCDC40-201ENST00000269318 MCM5P33992 734 aa19.64■□□□□ 0.74
CCDC40-201ENST00000269318 ANTXR2P58335 489 aa19.64■□□□□ 0.74
CCDC40-201ENST00000269318 PRR5LQ6MZQ0 368 aa19.64■□□□□ 0.74
CCDC40-201ENST00000269318 TBC1D10CQ8IV04 446 aa19.64■□□□□ 0.74
CCDC40-201ENST00000269318 PROM2Q8N271 834 aa19.64■□□□□ 0.74
CCDC40-201ENST00000269318 LRP2BPQ9P2M1 347 aa19.64■□□□□ 0.74
CCDC40-201ENST00000269318 VPS37CA5D8V6 355 aaPredicted RBP19.64■□□□□ 0.73
CCDC40-201ENST00000269318 NPHP1O15259 732 aa19.64■□□□□ 0.73
CCDC40-201ENST00000269318 APPP05067 770 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms