RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 IQSEC3Q9UPP2 1182 aaPredicted RBP20.21■□□□□ 0.83
SNRPF-201ENST00000266735 ARID4AP29374 1257 aaPredicted RBP20.2■□□□□ 0.82
SNRPF-201ENST00000266735 FKBP1AP62942 108 aaKnown RBP20.2■□□□□ 0.82
SNRPF-201ENST00000266735 TTC39AQ5SRH9 613 aa20.2■□□□□ 0.82
SNRPF-201ENST00000266735 ANKRD45Q5TZF3 282 aa20.2■□□□□ 0.82
SNRPF-201ENST00000266735 AGBL3Q8NEM8 1001 aa20.2■□□□□ 0.82
SNRPF-201ENST00000266735 ZNF512BQ96KM6 892 aaPredicted RBP20.2■□□□□ 0.82
SNRPF-201ENST00000266735 BCL11AQ9H165 835 aa20.2■□□□□ 0.82
SNRPF-201ENST00000266735 ZBTB12Q9Y330 459 aaPredicted RBP20.2■□□□□ 0.82
SNRPF-201ENST00000266735 IQCA1LA6NCM1 817 aa20.19■□□□□ 0.82
SNRPF-201ENST00000266735 GMPSP49915 693 aaPredicted RBP20.19■□□□□ 0.82
SNRPF-201ENST00000266735 CHAF1AQ13111 956 aaPredicted RBP20.19■□□□□ 0.82
SNRPF-201ENST00000266735 ZNF526Q8TF50 670 aaPredicted RBP20.19■□□□□ 0.82
SNRPF-201ENST00000266735 TBC1D22AQ8WUA7 517 aa20.19■□□□□ 0.82
SNRPF-201ENST00000266735 DPF2Q92785 391 aa20.19■□□□□ 0.82
SNRPF-201ENST00000266735 PDS5AQ29RF7 1337 aaKnown RBP20.18■□□□□ 0.82
SNRPF-201ENST00000266735 LMOD1P29536 600 aaPredicted RBP20.18■□□□□ 0.82
SNRPF-201ENST00000266735 SCNN1DP51172 638 aa20.18■□□□□ 0.82
SNRPF-201ENST00000266735 RASGRF1Q13972 1273 aa20.18■□□□□ 0.82
SNRPF-201ENST00000266735 WDR66Q8TBY9 1149 aa20.18■□□□□ 0.82
SNRPF-201ENST00000266735 ARAP2Q8WZ64 1704 aa20.18■□□□□ 0.82
SNRPF-201ENST00000266735 GPBP1L1Q9HC44 474 aaPredicted RBP20.18■□□□□ 0.82
SNRPF-201ENST00000266735 JAG2Q9Y219 1238 aa20.18■□□□□ 0.82
SNRPF-201ENST00000266735 CCDC88AQ3V6T2 1871 aa20.17■□□□□ 0.82
SNRPF-201ENST00000266735 MFSD14BQ5SR56 506 aa20.17■□□□□ 0.82
SNRPF-201ENST00000266735 B4GALNT3Q6L9W6 998 aa20.16■□□□□ 0.82
SNRPF-201ENST00000266735 SPATA5Q8NB90 893 aa20.16■□□□□ 0.82
SNRPF-201ENST00000266735 GMLQ99445 158 aa20.16■□□□□ 0.82
SNRPF-201ENST00000266735 MXD3Q9BW11 206 aa20.16■□□□□ 0.82
SNRPF-201ENST00000266735 GPRC5DQ9NZD1 345 aa20.16■□□□□ 0.82
SNRPF-201ENST00000266735 COL1A1P02452 1464 aaPredicted RBP20.15■□□□□ 0.82
SNRPF-201ENST00000266735 VEGFAP15692 232 aaPredicted RBP20.15■□□□□ 0.82
SNRPF-201ENST00000266735 MMP14P50281 582 aa20.15■□□□□ 0.82
SNRPF-201ENST00000266735 NUCB1Q02818 461 aa20.15■□□□□ 0.82
SNRPF-201ENST00000266735 ZGPATQ8N5A5 531 aaKnown RBP20.15■□□□□ 0.82
SNRPF-201ENST00000266735 CERS5Q8N5B7 392 aa20.15■□□□□ 0.82
SNRPF-201ENST00000266735 ZNF784Q8NCA9 323 aaPredicted RBP20.15■□□□□ 0.82
SNRPF-201ENST00000266735 GPATCH3Q96I76 525 aa20.15■□□□□ 0.82
SNRPF-201ENST00000266735 RRAGCQ9HB90 399 aa20.15■□□□□ 0.82
SNRPF-201ENST00000266735 HMG20BQ9P0W2 317 aa20.15■□□□□ 0.82
SNRPF-201ENST00000266735 HACL1Q9UJ83 578 aa20.15■□□□□ 0.82
SNRPF-201ENST00000266735 SALL1Q9NSC2 1324 aa20.15■□□□□ 0.82
SNRPF-201ENST00000266735 USP17L8P0C7I0 530 aa20.14■□□□□ 0.81
SNRPF-201ENST00000266735 MCAMP43121 646 aa20.14■□□□□ 0.81
SNRPF-201ENST00000266735 CHD1LQ86WJ1 897 aa20.14■□□□□ 0.81
SNRPF-201ENST00000266735 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.14■□□□□ 0.81
SNRPF-201ENST00000266735 NMRK2Q9NPI5 230 aa20.14■□□□□ 0.81
SNRPF-201ENST00000266735 CNOT7Q9UIV1 285 aaKnown RBP20.14■□□□□ 0.81
SNRPF-201ENST00000266735 SUGT1Q9Y2Z0 365 aa20.14■□□□□ 0.81
SNRPF-201ENST00000266735 POTECB2RU33 542 aa20.13■□□□□ 0.81
SNRPF-201ENST00000266735 H7C1D1 291 aa20.13■□□□□ 0.81
SNRPF-201ENST00000266735 SCARF1Q14162 830 aa20.13■□□□□ 0.81
SNRPF-201ENST00000266735 MICALL2Q8IY33 904 aa20.13■□□□□ 0.81
SNRPF-201ENST00000266735 OGFOD1Q8N543 542 aa20.13■□□□□ 0.81
SNRPF-201ENST00000266735 CCDC136Q96JN2 1154 aa20.13■□□□□ 0.81
SNRPF-201ENST00000266735 ECHDC1Q9NTX5 307 aa20.13■□□□□ 0.81
SNRPF-201ENST00000266735 WDR90Q96KV7 1748 aa20.12■□□□□ 0.81
SNRPF-201ENST00000266735 EPS15P42566 896 aa20.12■□□□□ 0.81
SNRPF-201ENST00000266735 ZNF280AP59817 542 aaPredicted RBP20.12■□□□□ 0.81
SNRPF-201ENST00000266735 KIAA0825Q8IV33 1275 aa20.12■□□□□ 0.81
SNRPF-201ENST00000266735 C16orf71Q8IYS4 520 aaPredicted RBP20.12■□□□□ 0.81
SNRPF-201ENST00000266735 LNPKQ9C0E8 428 aa20.12■□□□□ 0.81
SNRPF-201ENST00000266735 ADARB2Q9NS39 739 aaKnown RBP20.12■□□□□ 0.81
SNRPF-201ENST00000266735 HDAC9Q9UKV0 1011 aa20.12■□□□□ 0.81
SNRPF-201ENST00000266735 SCN9AQ15858 1988 aa20.12■□□□□ 0.81
SNRPF-201ENST00000266735 ATP5JP18859 108 aa20.11■□□□□ 0.81
SNRPF-201ENST00000266735 EPHX2P34913 555 aa20.11■□□□□ 0.81
SNRPF-201ENST00000266735 PI16Q6UXB8 463 aa20.11■□□□□ 0.81
SNRPF-201ENST00000266735 CENPQQ7L2Z9 268 aaPredicted RBP20.11■□□□□ 0.81
SNRPF-201ENST00000266735 TAF1DQ9H5J8 278 aaPredicted RBP20.11■□□□□ 0.81
SNRPF-201ENST00000266735 MX1P20591 662 aa20.1■□□□□ 0.81
SNRPF-201ENST00000266735 TTC41PQ6P2S7 1318 aa20.1■□□□□ 0.81
SNRPF-201ENST00000266735 MAST3O60307 1309 aa20.09■□□□□ 0.81
SNRPF-201ENST00000266735 SALL3Q9BXA9 1300 aa20.09■□□□□ 0.81
SNRPF-201ENST00000266735 F8W031 263 aaPredicted RBP20.09■□□□□ 0.81
SNRPF-201ENST00000266735 ZAP70P43403 619 aa20.09■□□□□ 0.81
SNRPF-201ENST00000266735 SPTY2D1Q68D10 685 aaPredicted RBP20.09■□□□□ 0.81
SNRPF-201ENST00000266735 USP50Q70EL3 339 aaPredicted RBP20.09■□□□□ 0.81
SNRPF-201ENST00000266735 PNMA8AQ86V59 439 aaPredicted RBP20.09■□□□□ 0.81
SNRPF-201ENST00000266735 OTUD7AQ8TE49 926 aaPredicted RBP20.09■□□□□ 0.81
SNRPF-201ENST00000266735 SNRKQ9NRH2 765 aa20.09■□□□□ 0.81
SNRPF-201ENST00000266735 PPP4R2Q9NY27 417 aa20.09■□□□□ 0.81
SNRPF-201ENST00000266735 ABCF2Q9UG63 623 aa20.09■□□□□ 0.81
SNRPF-201ENST00000266735 TTF2Q9UNY4 1162 aaKnown RBP20.09■□□□□ 0.81
SNRPF-201ENST00000266735 SHTN1A0MZ66 631 aa20.08■□□□□ 0.81
SNRPF-201ENST00000266735 ERC2O15083 957 aa20.08■□□□□ 0.81
SNRPF-201ENST00000266735 IGSF3O75054 1194 aa20.08■□□□□ 0.81
SNRPF-201ENST00000266735 LDHBP07195 334 aaKnown RBP20.08■□□□□ 0.81
SNRPF-201ENST00000266735 CYP2E1P05181 493 aaPredicted RBP20.08■□□□□ 0.8
SNRPF-201ENST00000266735 PRDX5P30044 214 aa20.08■□□□□ 0.8
SNRPF-201ENST00000266735 GRIK5Q16478 980 aa20.08■□□□□ 0.8
SNRPF-201ENST00000266735 HAUS7Q99871 368 aa20.08■□□□□ 0.8
SNRPF-201ENST00000266735 BOLA2Q9H3K6 86 aa20.08■□□□□ 0.8
SNRPF-201ENST00000266735 MYOZ2Q9NPC6 264 aa20.08■□□□□ 0.8
SNRPF-201ENST00000266735 PSME4Q14997 1843 aa20.07■□□□□ 0.8
SNRPF-201ENST00000266735 KIF3CO14782 793 aa20.07■□□□□ 0.8
SNRPF-201ENST00000266735 HDLBPQ00341 1268 aaKnown RBP20.07■□□□□ 0.8
SNRPF-201ENST00000266735 TTF1Q15361 905 aaPredicted RBP20.07■□□□□ 0.8
SNRPF-201ENST00000266735 KIF4BQ2VIQ3 1234 aa20.07■□□□□ 0.8
SNRPF-201ENST00000266735 TBC1D9Q6ZT07 1266 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms