RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 SCN4AP35499 1836 aa10.46□□□□□ -0.74
ERCC8-201ENST00000265038 APLP1P51693 650 aa10.45□□□□□ -0.74
ERCC8-201ENST00000265038 FKBP1AP62942 108 aaKnown RBP10.45□□□□□ -0.74
ERCC8-201ENST00000265038 HTRA3P83110 453 aa10.45□□□□□ -0.74
ERCC8-201ENST00000265038 FMR1Q06787 632 aaKnown RBP eCLIP10.45□□□□□ -0.74
ERCC8-201ENST00000265038 G3BP1Q13283 466 aaKnown RBP eCLIP10.45□□□□□ -0.74
ERCC8-201ENST00000265038 VPS37DQ86XT2 251 aa10.45□□□□□ -0.74
ERCC8-201ENST00000265038 KIAA0825Q8IV33 1275 aa10.45□□□□□ -0.74
ERCC8-201ENST00000265038 SCN9AQ15858 1988 aa10.45□□□□□ -0.74
ERCC8-201ENST00000265038 ZBTB22O15209 634 aa10.45□□□□□ -0.74
ERCC8-201ENST00000265038 ADORA1P30542 326 aa10.45□□□□□ -0.74
ERCC8-201ENST00000265038 TIMM10P62072 90 aa10.45□□□□□ -0.74
ERCC8-201ENST00000265038 MYOZ2Q9NPC6 264 aa10.45□□□□□ -0.74
ERCC8-201ENST00000265038 NOP58Q9Y2X3 529 aaKnown RBP10.45□□□□□ -0.74
ERCC8-201ENST00000265038 ASTN2O75129 1339 aaPredicted RBP10.45□□□□□ -0.74
ERCC8-201ENST00000265038 ADAMTSL1Q8N6G6 1762 aa10.44□□□□□ -0.74
ERCC8-201ENST00000265038 SURF6O75683 361 aaKnown RBP10.44□□□□□ -0.74
ERCC8-201ENST00000265038 RRP1P56182 461 aaKnown RBP10.44□□□□□ -0.74
ERCC8-201ENST00000265038 SCARF1Q14162 830 aa10.44□□□□□ -0.74
ERCC8-201ENST00000265038 SIRT2Q8IXJ6 389 aa10.44□□□□□ -0.74
ERCC8-201ENST00000265038 A0A1B0GUL7 405 aa10.43□□□□□ -0.74
ERCC8-201ENST00000265038 TRAF5O00463 557 aa10.43□□□□□ -0.74
ERCC8-201ENST00000265038 DLK2Q6UY11 383 aa10.43□□□□□ -0.74
ERCC8-201ENST00000265038 RPAP2Q8IXW5 612 aaPredicted RBP10.43□□□□□ -0.74
ERCC8-201ENST00000265038 OGFOD1Q8N543 542 aa10.43□□□□□ -0.74
ERCC8-201ENST00000265038 GLIS2Q9BZE0 524 aaPredicted RBP10.43□□□□□ -0.74
ERCC8-201ENST00000265038 AKAP2Q9Y2D5 859 aa10.43□□□□□ -0.74
ERCC8-201ENST00000265038 F8W031 263 aaPredicted RBP10.43□□□□□ -0.74
ERCC8-201ENST00000265038 PHKA1P46020 1223 aa10.43□□□□□ -0.74
ERCC8-201ENST00000265038 MMP14P50281 582 aa10.43□□□□□ -0.74
ERCC8-201ENST00000265038 CHAF1AQ13111 956 aaPredicted RBP10.43□□□□□ -0.74
ERCC8-201ENST00000265038 GRIK5Q16478 980 aa10.43□□□□□ -0.74
ERCC8-201ENST00000265038 NBPF9Q3BBW0 867 aa10.43□□□□□ -0.74
ERCC8-201ENST00000265038 MFSD14BQ5SR56 506 aa10.43□□□□□ -0.74
ERCC8-201ENST00000265038 CDC37L1Q7L3B6 337 aa10.43□□□□□ -0.74
ERCC8-201ENST00000265038 ZBED3Q96IU2 234 aaPredicted RBP10.43□□□□□ -0.74
ERCC8-201ENST00000265038 CHMP4BQ9H444 224 aaKnown RBP10.43□□□□□ -0.74
ERCC8-201ENST00000265038 WNT10BO00744 389 aa10.42□□□□□ -0.74
ERCC8-201ENST00000265038 FRAT2O75474 233 aaPredicted RBP10.42□□□□□ -0.74
ERCC8-201ENST00000265038 CCDC102BQ68D86 513 aa10.42□□□□□ -0.74
ERCC8-201ENST00000265038 USP48Q86UV5 1035 aa10.42□□□□□ -0.74
ERCC8-201ENST00000265038 DNAJC5GQ8N7S2 189 aa10.42□□□□□ -0.74
ERCC8-201ENST00000265038 XAGE2Q96GT9 111 aa10.42□□□□□ -0.74
ERCC8-201ENST00000265038 GGA3Q9NZ52 723 aa10.42□□□□□ -0.74
ERCC8-201ENST00000265038 HDAC9Q9UKV0 1011 aa10.42□□□□□ -0.74
ERCC8-201ENST00000265038 PCDHAC2Q9Y5I4 1007 aa10.42□□□□□ -0.74
ERCC8-201ENST00000265038 A0A1B0GUL6 1792 aa10.42□□□□□ -0.74
ERCC8-201ENST00000265038 OS9Q13438 667 aaPredicted RBP10.41□□□□□ -0.74
ERCC8-201ENST00000265038 ANGEL2Q5VTE6 544 aaKnown RBP10.41□□□□□ -0.74
ERCC8-201ENST00000265038 CST9Q5W186 159 aa10.41□□□□□ -0.74
ERCC8-201ENST00000265038 DCPSQ96C86 337 aaKnown RBP10.41□□□□□ -0.74
ERCC8-201ENST00000265038 NEUROD6Q96NK8 337 aa10.41□□□□□ -0.74
ERCC8-201ENST00000265038 GPR108Q9NPR9 543 aa10.41□□□□□ -0.74
ERCC8-201ENST00000265038 TMEM88BA6NKF7 163 aa10.41□□□□□ -0.74
ERCC8-201ENST00000265038 TNNI3KQ59H18 835 aa10.41□□□□□ -0.74
ERCC8-201ENST00000265038 KRT26Q7Z3Y9 468 aa10.41□□□□□ -0.74
ERCC8-201ENST00000265038 MTMR14Q8NCE2 650 aa10.41□□□□□ -0.74
ERCC8-201ENST00000265038 CNKSR2Q8WXI2 1034 aa10.41□□□□□ -0.74
ERCC8-201ENST00000265038 CREBZFQ9NS37 354 aa10.41□□□□□ -0.74
ERCC8-201ENST00000265038 EXOC6BQ9Y2D4 811 aa10.41□□□□□ -0.74
ERCC8-201ENST00000265038 FPGT-TNNI3KV9GXZ4 949 aa10.41□□□□□ -0.74
ERCC8-201ENST00000265038 ADM5C9JUS6 153 aa10.4□□□□□ -0.74
ERCC8-201ENST00000265038 CFAP100Q494V2 611 aa10.4□□□□□ -0.74
ERCC8-201ENST00000265038 TBC1D22AQ8WUA7 517 aa10.4□□□□□ -0.74
ERCC8-201ENST00000265038 GNL3LQ9NVN8 582 aaKnown RBP10.4□□□□□ -0.74
ERCC8-201ENST00000265038 TTF2Q9UNY4 1162 aaKnown RBP10.4□□□□□ -0.74
ERCC8-201ENST00000265038 SCAF8Q9UPN6 1271 aaKnown RBP10.4□□□□□ -0.74
ERCC8-201ENST00000265038 COL1A1P02452 1464 aaPredicted RBP10.4□□□□□ -0.74
ERCC8-201ENST00000265038 AOX1Q06278 1338 aa10.4□□□□□ -0.75
ERCC8-201ENST00000265038 SEMA3EO15041 775 aa10.4□□□□□ -0.75
ERCC8-201ENST00000265038 DLGAP5Q15398 846 aa10.4□□□□□ -0.75
ERCC8-201ENST00000265038 WDR66Q8TBY9 1149 aa10.4□□□□□ -0.75
ERCC8-201ENST00000265038 PRMT6Q96LA8 375 aaPredicted RBP10.4□□□□□ -0.75
ERCC8-201ENST00000265038 DENND2AQ9ULE3 1009 aa10.4□□□□□ -0.75
ERCC8-201ENST00000265038 HMMRO75330 724 aa10.39□□□□□ -0.75
ERCC8-201ENST00000265038 RASGRF1Q13972 1273 aa10.39□□□□□ -0.75
ERCC8-201ENST00000265038 SULF1Q8IWU6 871 aa10.39□□□□□ -0.75
ERCC8-201ENST00000265038 EAF2Q96CJ1 260 aaPredicted RBP10.39□□□□□ -0.75
ERCC8-201ENST00000265038 DBNDD2Q9BQY9 259 aa10.39□□□□□ -0.75
ERCC8-201ENST00000265038 SERPINA10Q9UK55 444 aa10.39□□□□□ -0.75
ERCC8-201ENST00000265038 ZNF646O15015 1829 aaPredicted RBP10.39□□□□□ -0.75
ERCC8-201ENST00000265038 PITPNM2Q9BZ72 1349 aa10.38□□□□□ -0.75
ERCC8-201ENST00000265038 SPDYE2BA6NHP3 402 aa10.38□□□□□ -0.75
ERCC8-201ENST00000265038 CELF2O95319 508 aaKnown RBP10.38□□□□□ -0.75
ERCC8-201ENST00000265038 SPDYE6P0CI01 402 aa10.38□□□□□ -0.75
ERCC8-201ENST00000265038 CRKP46108 304 aa10.38□□□□□ -0.75
ERCC8-201ENST00000265038 CRBNQ96SW2 442 aa10.38□□□□□ -0.75
ERCC8-201ENST00000265038 SUGT1Q9Y2Z0 365 aa10.38□□□□□ -0.75
ERCC8-201ENST00000265038 SALL1Q9NSC2 1324 aa10.38□□□□□ -0.75
ERCC8-201ENST00000265038 ARID4AP29374 1257 aaPredicted RBP10.38□□□□□ -0.75
ERCC8-201ENST00000265038 PRDX5P30044 214 aa10.38□□□□□ -0.75
ERCC8-201ENST00000265038 RBM5P52756 815 aaKnown RBP eCLIP10.38□□□□□ -0.75
ERCC8-201ENST00000265038 HSP90AB4PQ58FF6 505 aa10.38□□□□□ -0.75
ERCC8-201ENST00000265038 GORABQ5T7V8 394 aa10.38□□□□□ -0.75
ERCC8-201ENST00000265038 ERC1Q8IUD2 1116 aa10.38□□□□□ -0.75
ERCC8-201ENST00000265038 RHPN1Q8TCX5 695 aa10.38□□□□□ -0.75
ERCC8-201ENST00000265038 KLRG1Q96E93 195 aa10.38□□□□□ -0.75
ERCC8-201ENST00000265038 MRIQ9BWK5 157 aa10.38□□□□□ -0.75
ERCC8-201ENST00000265038 CCDC8Q9H0W5 538 aaPredicted RBP10.38□□□□□ -0.75
ERCC8-201ENST00000265038 ZNF408Q9H9D4 720 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms