RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PLCB3Q01970 1234 aa13.65□□□□□ -0.22
SMG6-201ENST00000263073 SCAF11Q99590 1463 aaKnown RBP13.65□□□□□ -0.22
SMG6-201ENST00000263073 VIMP08670 466 aaKnown RBP13.64□□□□□ -0.23
SMG6-201ENST00000263073 NAPAP54920 295 aa13.64□□□□□ -0.23
SMG6-201ENST00000263073 RAPGEF1Q13905 1077 aa13.64□□□□□ -0.23
SMG6-201ENST00000263073 ZBTB40Q9NUA8 1239 aa13.64□□□□□ -0.23
SMG6-201ENST00000263073 NDUFB9Q9Y6M9 179 aa13.64□□□□□ -0.23
SMG6-201ENST00000263073 VWA3AA6NCI4 1184 aa13.64□□□□□ -0.23
SMG6-201ENST00000263073 CCDC174Q6PII3 467 aa13.64□□□□□ -0.23
SMG6-201ENST00000263073 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
SMG6-201ENST00000263073 ERO1AQ96HE7 468 aa13.64□□□□□ -0.23
SMG6-201ENST00000263073 FEZ1Q99689 392 aa13.64□□□□□ -0.23
SMG6-201ENST00000263073 MSH6P52701 1360 aa13.64□□□□□ -0.23
SMG6-201ENST00000263073 RPRD2Q5VT52 1461 aaKnown RBP13.64□□□□□ -0.23
SMG6-201ENST00000263073 SEC62Q99442 399 aaKnown RBP13.64□□□□□ -0.23
SMG6-201ENST00000263073 AKR1B15C9JRZ8 316 aaPredicted RBP13.64□□□□□ -0.23
SMG6-201ENST00000263073 ANKLE2Q86XL3 938 aa13.64□□□□□ -0.23
SMG6-201ENST00000263073 MYRIPQ8NFW9 859 aa13.64□□□□□ -0.23
SMG6-201ENST00000263073 PPM1EQ8WY54 764 aa13.64□□□□□ -0.23
SMG6-201ENST00000263073 TRIM31Q9BZY9 425 aa13.64□□□□□ -0.23
SMG6-201ENST00000263073 ACTN2P35609 894 aa13.64□□□□□ -0.23
SMG6-201ENST00000263073 CFAP58Q5T655 872 aa13.64□□□□□ -0.23
SMG6-201ENST00000263073 UTP14CQ5TAP6 766 aaKnown RBP13.64□□□□□ -0.23
SMG6-201ENST00000263073 A0A1B0GUL7 405 aa13.63□□□□□ -0.23
SMG6-201ENST00000263073 TRIM75PA6NK02 468 aa13.63□□□□□ -0.23
SMG6-201ENST00000263073 NEK11Q8NG66 645 aa13.63□□□□□ -0.23
SMG6-201ENST00000263073 KRT23Q9C075 422 aa13.63□□□□□ -0.23
SMG6-201ENST00000263073 GRM8O00222 908 aa13.63□□□□□ -0.23
SMG6-201ENST00000263073 DCAF17Q5H9S7 520 aaPredicted RBP13.63□□□□□ -0.23
SMG6-201ENST00000263073 DCTPP1Q9H773 170 aa13.63□□□□□ -0.23
SMG6-201ENST00000263073 ZBTB21Q9ULJ3 1066 aa13.63□□□□□ -0.23
SMG6-201ENST00000263073 HINFPQ9BQA5 517 aa13.63□□□□□ -0.23
SMG6-201ENST00000263073 IL16Q14005 1332 aa13.63□□□□□ -0.23
SMG6-201ENST00000263073 CCDC141Q6ZP82 1450 aa13.63□□□□□ -0.23
SMG6-201ENST00000263073 NBPF7P0C2Y1 421 aaPredicted RBP13.63□□□□□ -0.23
SMG6-201ENST00000263073 OAS2P29728 719 aaKnown RBP13.63□□□□□ -0.23
SMG6-201ENST00000263073 PPM1FP49593 454 aaPredicted RBP13.63□□□□□ -0.23
SMG6-201ENST00000263073 ARHGAP45Q92619 1136 aa13.63□□□□□ -0.23
SMG6-201ENST00000263073 AMOTL2Q9Y2J4 779 aa13.63□□□□□ -0.23
SMG6-201ENST00000263073 WDHD1O75717 1129 aaPredicted RBP13.62□□□□□ -0.23
SMG6-201ENST00000263073 FERP16591 822 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 IRX5P78411 483 aaPredicted RBP13.62□□□□□ -0.23
SMG6-201ENST00000263073 UAP1Q16222 522 aaPredicted RBP13.62□□□□□ -0.23
SMG6-201ENST00000263073 IGSF22Q8N9C0 903 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 FAM212AQ96EL1 285 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 ACEP12821 1306 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 KRT2P35908 639 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 PSMC4P43686 418 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 ZNF75DP51815 510 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 TMCO4Q5TGY1 634 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 SPATA24Q86W54 205 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 KSR1Q8IVT5 923 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 VAV2P52735 878 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 PPP1R7Q15435 360 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 PYM1Q9BRP8 204 aaKnown RBP13.62□□□□□ -0.23
SMG6-201ENST00000263073 LUC7L2Q9Y383 392 aaKnown RBP13.62□□□□□ -0.23
SMG6-201ENST00000263073 ATP2B3Q16720 1220 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 MAGEB6Q8N7X4 407 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 PHACTR3Q96KR7 559 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 BCL2L12Q9HB09 334 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 SAMD15Q9P1V8 674 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 ECM2O94769 699 aaPredicted RBP13.62□□□□□ -0.23
SMG6-201ENST00000263073 TSNARE1Q96NA8 513 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 PHF8Q9UPP1 1060 aa13.62□□□□□ -0.23
SMG6-201ENST00000263073 MAPKBP1O60336 1514 aa13.61□□□□□ -0.23
SMG6-201ENST00000263073 VAMP4O75379 141 aa13.61□□□□□ -0.23
SMG6-201ENST00000263073 KLHDC4Q8TBB5 520 aa13.61□□□□□ -0.23
SMG6-201ENST00000263073 ANKRD24Q8TF21 1146 aa13.61□□□□□ -0.23
SMG6-201ENST00000263073 ESR2Q92731 530 aa13.61□□□□□ -0.23
SMG6-201ENST00000263073 CEP83Q9Y592 693 aa13.61□□□□□ -0.23
SMG6-201ENST00000263073 MYL5Q02045 173 aa13.61□□□□□ -0.23
SMG6-201ENST00000263073 IDI1Q13907 227 aa13.61□□□□□ -0.23
SMG6-201ENST00000263073 ZNF354CQ86Y25 554 aa13.61□□□□□ -0.23
SMG6-201ENST00000263073 CRNKL1Q9BZJ0 848 aaKnown RBP13.61□□□□□ -0.23
SMG6-201ENST00000263073 KIF14Q15058 1648 aa13.61□□□□□ -0.23
SMG6-201ENST00000263073 SPAG1Q07617 926 aa13.61□□□□□ -0.23
SMG6-201ENST00000263073 G2E3Q7L622 706 aa13.61□□□□□ -0.23
SMG6-201ENST00000263073 NDUFAB1O14561 156 aa13.61□□□□□ -0.23
SMG6-201ENST00000263073 MTHFSDQ2M296 383 aaKnown RBP13.61□□□□□ -0.23
SMG6-201ENST00000263073 TMEM63CQ9P1W3 806 aa13.61□□□□□ -0.23
SMG6-201ENST00000263073 NPHP3Q7Z494 1330 aa13.61□□□□□ -0.23
SMG6-201ENST00000263073 ERCC5P28715 1186 aaPredicted RBP13.61□□□□□ -0.23
SMG6-201ENST00000263073 CEBPAP49715 358 aaPredicted RBP13.61□□□□□ -0.23
SMG6-201ENST00000263073 TNNI2P48788 182 aa13.6□□□□□ -0.23
SMG6-201ENST00000263073 FANCCQ00597 558 aa13.6□□□□□ -0.23
SMG6-201ENST00000263073 BICC1Q9H694 974 aaKnown RBP13.6□□□□□ -0.23
SMG6-201ENST00000263073 CDC37L1Q7L3B6 337 aa13.6□□□□□ -0.23
SMG6-201ENST00000263073 STXBP4Q6ZWJ1 553 aa13.6□□□□□ -0.23
SMG6-201ENST00000263073 LMBRD1Q9NUN5 540 aa13.6□□□□□ -0.23
SMG6-201ENST00000263073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.6□□□□□ -0.23
SMG6-201ENST00000263073 LRRC59Q96AG4 307 aaKnown RBP13.6□□□□□ -0.23
SMG6-201ENST00000263073 RSRC1Q96IZ7 334 aaKnown RBP13.6□□□□□ -0.23
SMG6-201ENST00000263073 TRMT44Q8IYL2 757 aaKnown RBP13.6□□□□□ -0.23
SMG6-201ENST00000263073 FAM227BQ96M60 508 aa13.6□□□□□ -0.23
SMG6-201ENST00000263073 SMC6Q96SB8 1091 aa13.6□□□□□ -0.23
SMG6-201ENST00000263073 NAPGQ99747 312 aaPredicted RBP13.6□□□□□ -0.23
SMG6-201ENST00000263073 PPP1R12CQ9BZL4 782 aa13.6□□□□□ -0.23
SMG6-201ENST00000263073 DMRT2Q9Y5R5 561 aa13.6□□□□□ -0.23
SMG6-201ENST00000263073 SNX14Q9Y5W7 946 aa13.6□□□□□ -0.23
SMG6-201ENST00000263073 ASXL1Q8IXJ9 1541 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms