RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 SLC24A3Q9HC58 644 aa16.34■□□□□ 0.21
SCARF1-201ENST00000263071 A0A087WZG4 1122 aa16.34■□□□□ 0.21
SCARF1-201ENST00000263071 GNL2Q13823 731 aaKnown RBP16.34■□□□□ 0.21
SCARF1-201ENST00000263071 TTC19Q6DKK2 380 aaPredicted RBP16.34■□□□□ 0.21
SCARF1-201ENST00000263071 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
SCARF1-201ENST00000263071 ORAI2Q96SN7 254 aa16.34■□□□□ 0.21
SCARF1-201ENST00000263071 SEC31AO94979 1220 aaKnown RBP16.33■□□□□ 0.21
SCARF1-201ENST00000263071 NBPF5PQ86XG9 351 aaPredicted RBP16.33■□□□□ 0.21
SCARF1-201ENST00000263071 CCAR2Q8N163 923 aaKnown RBP16.33■□□□□ 0.21
SCARF1-201ENST00000263071 ZNF594Q96JF6 807 aaPredicted RBP16.33■□□□□ 0.21
SCARF1-201ENST00000263071 ZNF75DP51815 510 aa16.33■□□□□ 0.2
SCARF1-201ENST00000263071 CHRNA2Q15822 529 aa16.33■□□□□ 0.2
SCARF1-201ENST00000263071 KIF20BQ96Q89 1820 aa16.33■□□□□ 0.2
SCARF1-201ENST00000263071 KIF3CO14782 793 aa16.33■□□□□ 0.2
SCARF1-201ENST00000263071 TOB2Q14106 344 aaPredicted RBP16.33■□□□□ 0.2
SCARF1-201ENST00000263071 TTC41PQ6P2S7 1318 aa16.33■□□□□ 0.2
SCARF1-201ENST00000263071 GBP6Q6ZN66 633 aa16.33■□□□□ 0.2
SCARF1-201ENST00000263071 CCDC82Q8N4S0 544 aa16.33■□□□□ 0.2
SCARF1-201ENST00000263071 TMEM2Q9UHN6 1383 aa16.32■□□□□ 0.2
SCARF1-201ENST00000263071 TTC36A6NLP5 189 aa16.32■□□□□ 0.2
SCARF1-201ENST00000263071 TTC5Q8N0Z6 440 aa16.32■□□□□ 0.2
SCARF1-201ENST00000263071 GIGYF1O75420 1035 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-201ENST00000263071 JMYQ8N9B5 988 aa16.32■□□□□ 0.2
SCARF1-201ENST00000263071 MAP4K1Q92918 833 aa16.32■□□□□ 0.2
SCARF1-201ENST00000263071 ANKRD24Q8TF21 1146 aa16.32■□□□□ 0.2
SCARF1-201ENST00000263071 TTC21AQ8NDW8 1320 aa16.31■□□□□ 0.2
SCARF1-201ENST00000263071 RAPGEF4Q8WZA2 1011 aa16.31■□□□□ 0.2
SCARF1-201ENST00000263071 ZBTB3Q9H5J0 574 aa16.31■□□□□ 0.2
SCARF1-201ENST00000263071 ADCY9O60503 1353 aa16.31■□□□□ 0.2
SCARF1-201ENST00000263071 RNMTO43148 476 aaKnown RBP16.31■□□□□ 0.2
SCARF1-201ENST00000263071 MARCKSP29966 332 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-201ENST00000263071 GOLGA8FQ08AF8 430 aa16.31■□□□□ 0.2
SCARF1-201ENST00000263071 GOLGA8DPQ0D2H9 430 aa16.31■□□□□ 0.2
SCARF1-201ENST00000263071 LMBR1LQ6UX01 489 aa16.31■□□□□ 0.2
SCARF1-201ENST00000263071 ZNF513Q8N8E2 541 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-201ENST00000263071 DBNLQ9UJU6 430 aaKnown RBP16.31■□□□□ 0.2
SCARF1-201ENST00000263071 RICTORQ6R327 1708 aa16.31■□□□□ 0.2
SCARF1-201ENST00000263071 NPHP3Q7Z494 1330 aa16.31■□□□□ 0.2
SCARF1-201ENST00000263071 STK38Q15208 465 aa16.31■□□□□ 0.2
SCARF1-201ENST00000263071 ANKRD1Q15327 319 aa16.31■□□□□ 0.2
SCARF1-201ENST00000263071 NBPF10Q6P3W6 841 aaKnown RBP16.31■□□□□ 0.2
SCARF1-201ENST00000263071 USP28Q96RU2 1077 aa16.31■□□□□ 0.2
SCARF1-201ENST00000263071 PTPDC1A2A3K4 754 aa16.3■□□□□ 0.2
SCARF1-201ENST00000263071 CPLX1O14810 134 aa16.3■□□□□ 0.2
SCARF1-201ENST00000263071 CYP21A2P08686 494 aa16.3■□□□□ 0.2
SCARF1-201ENST00000263071 CORO7P57737 925 aa16.3■□□□□ 0.2
SCARF1-201ENST00000263071 MAP9Q49MG5 647 aa16.3■□□□□ 0.2
SCARF1-201ENST00000263071 NAIF1Q69YI7 327 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-201ENST00000263071 LRRN4CLQ8ND94 238 aa16.3■□□□□ 0.2
SCARF1-201ENST00000263071 FUCA2Q9BTY2 467 aa16.3■□□□□ 0.2
SCARF1-201ENST00000263071 SSH2Q76I76 1423 aa16.3■□□□□ 0.2
SCARF1-201ENST00000263071 CCDC69A6NI79 296 aa16.3■□□□□ 0.2
SCARF1-201ENST00000263071 SCRN1Q12765 414 aa16.3■□□□□ 0.2
SCARF1-201ENST00000263071 EFCAB13Q8IY85 973 aa16.3■□□□□ 0.2
SCARF1-201ENST00000263071 TMEM87AQ8NBN3 555 aa16.3■□□□□ 0.2
SCARF1-201ENST00000263071 LINS1Q8NG48 757 aa16.3■□□□□ 0.2
SCARF1-201ENST00000263071 LMOD1P29536 600 aaPredicted RBP16.29■□□□□ 0.2
SCARF1-201ENST00000263071 EPC1Q9H2F5 836 aa16.29■□□□□ 0.2
SCARF1-201ENST00000263071 DDX19AQ9NUU7 478 aaKnown RBP16.29■□□□□ 0.2
SCARF1-201ENST00000263071 CLTCQ00610 1675 aaKnown RBP16.29■□□□□ 0.2
SCARF1-201ENST00000263071 DLC1Q96QB1 1528 aa16.29■□□□□ 0.2
SCARF1-201ENST00000263071 OVOS2A0A0J9YW53 1432 aa16.29■□□□□ 0.2
SCARF1-201ENST00000263071 OVOS2Q6IE36 1432 aa16.29■□□□□ 0.2
SCARF1-201ENST00000263071 TMC6Q7Z403 805 aa16.29■□□□□ 0.2
SCARF1-201ENST00000263071 TAF5LO75529 589 aa16.29■□□□□ 0.2
SCARF1-201ENST00000263071 TADA2BQ86TJ2 420 aa16.29■□□□□ 0.2
SCARF1-201ENST00000263071 KAZALD1Q96I82 304 aa16.29■□□□□ 0.2
SCARF1-201ENST00000263071 CLSTN2Q9H4D0 955 aa16.29■□□□□ 0.2
SCARF1-201ENST00000263071 VPS18Q9P253 973 aa16.29■□□□□ 0.2
SCARF1-201ENST00000263071 AOX1Q06278 1338 aa16.28■□□□□ 0.2
SCARF1-201ENST00000263071 REXO1L1PQ8IX06 675 aa16.28■□□□□ 0.2
SCARF1-201ENST00000263071 IGKV5-2P06315 115 aa16.28■□□□□ 0.2
SCARF1-201ENST00000263071 RDXP35241 583 aaKnown RBP16.28■□□□□ 0.2
SCARF1-201ENST00000263071 ZKSCAN8Q15776 578 aaPredicted RBP16.28■□□□□ 0.2
SCARF1-201ENST00000263071 IQUBQ8NA54 791 aa16.28■□□□□ 0.2
SCARF1-201ENST00000263071 HIP1O00291 1037 aa16.28■□□□□ 0.2
SCARF1-201ENST00000263071 FOXR1Q6PIV2 292 aa16.28■□□□□ 0.2
SCARF1-201ENST00000263071 PDILTQ8N807 584 aa16.28■□□□□ 0.2
SCARF1-201ENST00000263071 SNW1Q13573 536 aaKnown RBP16.27■□□□□ 0.2
SCARF1-201ENST00000263071 AKAP4Q5JQC9 854 aa16.27■□□□□ 0.2
SCARF1-201ENST00000263071 ANKRD13DQ6ZTN6 518 aa16.27■□□□□ 0.2
SCARF1-201ENST00000263071 ZNF496Q96IT1 587 aaPredicted RBP16.27■□□□□ 0.2
SCARF1-201ENST00000263071 PSD3Q9NYI0 1048 aa16.27■□□□□ 0.2
SCARF1-201ENST00000263071 CFAP45Q9UL16 551 aa16.27■□□□□ 0.2
SCARF1-201ENST00000263071 ZRANB2O95218 330 aaKnown RBP eCLIP16.27■□□□□ 0.19
SCARF1-201ENST00000263071 GCP02774 474 aa16.27■□□□□ 0.19
SCARF1-201ENST00000263071 IP6K1Q92551 441 aa16.27■□□□□ 0.19
SCARF1-201ENST00000263071 AXIN2Q9Y2T1 843 aa16.27■□□□□ 0.19
SCARF1-201ENST00000263071 ERLIN2O94905 339 aa16.26■□□□□ 0.19
SCARF1-201ENST00000263071 GOLPH3LQ9H4A5 285 aa16.26■□□□□ 0.19
SCARF1-201ENST00000263071 ATP8B1O43520 1251 aa16.26■□□□□ 0.19
SCARF1-201ENST00000263071 JPH2Q9BR39 696 aaPredicted RBP16.26■□□□□ 0.19
SCARF1-201ENST00000263071 ARFGAP3Q9NP61 516 aa16.26■□□□□ 0.19
SCARF1-201ENST00000263071 MKRN1Q9UHC7 482 aaKnown RBP16.26■□□□□ 0.19
SCARF1-201ENST00000263071 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
SCARF1-201ENST00000263071 A0A087WUV0 522 aaPredicted RBP16.26■□□□□ 0.19
SCARF1-201ENST00000263071 SPECC1Q5M775 1068 aa16.26■□□□□ 0.19
SCARF1-201ENST00000263071 PRPF38AQ8NAV1 312 aaKnown RBP16.26■□□□□ 0.19
SCARF1-201ENST00000263071 ZSCAN16Q9H4T2 348 aaPredicted RBP16.26■□□□□ 0.19
SCARF1-201ENST00000263071 ZSWIM4Q9H7M6 989 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms