RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 DPH6Q7L8W6 267 aa14.56□□□□□ -0.08
TTC39A-202ENST00000262676 RHOXF2Q9BQY4 288 aa14.56□□□□□ -0.08
TTC39A-202ENST00000262676 PCDH11XQ9BZA7 1347 aa14.56□□□□□ -0.08
TTC39A-202ENST00000262676 PCDH11YQ9BZA8 1340 aa14.56□□□□□ -0.08
TTC39A-202ENST00000262676 ZNF772Q68DY9 489 aaPredicted RBP14.56□□□□□ -0.08
TTC39A-202ENST00000262676 SAMD15Q9P1V8 674 aa14.56□□□□□ -0.08
TTC39A-202ENST00000262676 CIB2O75838 187 aa14.56□□□□□ -0.08
TTC39A-202ENST00000262676 UVSSAQ2YD98 709 aa14.56□□□□□ -0.08
TTC39A-202ENST00000262676 CCDC184Q52MB2 194 aa14.56□□□□□ -0.08
TTC39A-202ENST00000262676 CEP85LQ5SZL2 805 aa14.56□□□□□ -0.08
TTC39A-202ENST00000262676 CCDC102BQ68D86 513 aa14.56□□□□□ -0.08
TTC39A-202ENST00000262676 GBP7Q8N8V2 638 aaPredicted RBP14.56□□□□□ -0.08
TTC39A-202ENST00000262676 USP16Q9Y5T5 823 aa14.56□□□□□ -0.08
TTC39A-202ENST00000262676 CYP7A1P22680 504 aa14.55□□□□□ -0.08
TTC39A-202ENST00000262676 UBA7P41226 1012 aa14.55□□□□□ -0.08
TTC39A-202ENST00000262676 SETDB1Q15047 1291 aa14.55□□□□□ -0.08
TTC39A-202ENST00000262676 SLC26A6Q9BXS9 759 aa14.55□□□□□ -0.08
TTC39A-202ENST00000262676 CCDC87Q9NVE4 849 aa14.55□□□□□ -0.08
TTC39A-202ENST00000262676 GPATCH8Q9UKJ3 1502 aaKnown RBP14.55□□□□□ -0.08
TTC39A-202ENST00000262676 CCDC172P0C7W6 258 aa14.55□□□□□ -0.08
TTC39A-202ENST00000262676 LACTBP83111 547 aaPredicted RBP14.55□□□□□ -0.08
TTC39A-202ENST00000262676 AKAP4Q5JQC9 854 aa14.55□□□□□ -0.08
TTC39A-202ENST00000262676 PPFIBP2Q8ND30 876 aa14.55□□□□□ -0.08
TTC39A-202ENST00000262676 SSH1Q8WYL5 1049 aa14.55□□□□□ -0.08
TTC39A-202ENST00000262676 SPAG5Q96R06 1193 aa14.55□□□□□ -0.08
TTC39A-202ENST00000262676 EPSTI1Q96J88 318 aa14.55□□□□□ -0.08
TTC39A-202ENST00000262676 IRS4O14654 1257 aaPredicted RBP14.55□□□□□ -0.08
TTC39A-202ENST00000262676 TBCAO75347 108 aaKnown RBP14.55□□□□□ -0.08
TTC39A-202ENST00000262676 SATB1Q01826 763 aa14.55□□□□□ -0.08
TTC39A-202ENST00000262676 PLCB3Q01970 1234 aa14.55□□□□□ -0.08
TTC39A-202ENST00000262676 EIF4A2Q14240 407 aaKnown RBP14.55□□□□□ -0.08
TTC39A-202ENST00000262676 KRBA2Q6ZNG9 492 aa14.55□□□□□ -0.08
TTC39A-202ENST00000262676 UFL1O94874 794 aa14.54□□□□□ -0.08
TTC39A-202ENST00000262676 KARSQ15046 597 aaKnown RBP14.54□□□□□ -0.08
TTC39A-202ENST00000262676 TTF1Q15361 905 aaPredicted RBP14.54□□□□□ -0.08
TTC39A-202ENST00000262676 TMEM67Q5HYA8 995 aa14.54□□□□□ -0.08
TTC39A-202ENST00000262676 KANK3Q6NY19 840 aa14.54□□□□□ -0.08
TTC39A-202ENST00000262676 TRIM7Q9C029 511 aa14.54□□□□□ -0.08
TTC39A-202ENST00000262676 TTC12Q9H892 705 aaPredicted RBP14.54□□□□□ -0.08
TTC39A-202ENST00000262676 CCDC186Q7Z3E2 898 aa14.54□□□□□ -0.08
TTC39A-202ENST00000262676 EYA3Q99504 573 aa14.54□□□□□ -0.08
TTC39A-202ENST00000262676 PPP1R12CQ9BZL4 782 aa14.54□□□□□ -0.08
TTC39A-202ENST00000262676 TRPC5Q9UL62 973 aaPredicted RBP14.54□□□□□ -0.08
TTC39A-202ENST00000262676 TACC1O75410 805 aa14.54□□□□□ -0.08
TTC39A-202ENST00000262676 PCK1P35558 622 aa14.54□□□□□ -0.08
TTC39A-202ENST00000262676 UBE2HP62256 183 aa14.54□□□□□ -0.08
TTC39A-202ENST00000262676 SARNPP82979 210 aaKnown RBP14.54□□□□□ -0.08
TTC39A-202ENST00000262676 WDR62O43379 1518 aa14.54□□□□□ -0.08
TTC39A-202ENST00000262676 SLU7O95391 586 aaKnown RBP14.54□□□□□ -0.08
TTC39A-202ENST00000262676 ATP11AP98196 1134 aa14.54□□□□□ -0.08
TTC39A-202ENST00000262676 TSHZ3Q63HK5 1081 aa14.54□□□□□ -0.08
TTC39A-202ENST00000262676 GMNNO75496 209 aa14.53□□□□□ -0.08
TTC39A-202ENST00000262676 IARSP41252 1262 aaKnown RBP14.53□□□□□ -0.08
TTC39A-202ENST00000262676 UBLCP1Q8WVY7 318 aaPredicted RBP14.53□□□□□ -0.08
TTC39A-202ENST00000262676 MBIPQ9NS73 344 aa14.53□□□□□ -0.08
TTC39A-202ENST00000262676 ATP2A1O14983 1001 aa14.53□□□□□ -0.08
TTC39A-202ENST00000262676 GSTO1P78417 241 aa14.53□□□□□ -0.08
TTC39A-202ENST00000262676 TAF12Q16514 161 aa14.53□□□□□ -0.08
TTC39A-202ENST00000262676 LMBR1LQ6UX01 489 aa14.53□□□□□ -0.08
TTC39A-202ENST00000262676 SYKP43405 635 aa14.53□□□□□ -0.08
TTC39A-202ENST00000262676 INTS8Q75QN2 995 aaKnown RBP14.53□□□□□ -0.08
TTC39A-202ENST00000262676 MICU3Q86XE3 530 aa14.53□□□□□ -0.08
TTC39A-202ENST00000262676 GTPBP4Q9BZE4 634 aaKnown RBP14.53□□□□□ -0.08
TTC39A-202ENST00000262676 MYCP01106 439 aaPredicted RBP14.53□□□□□ -0.08
TTC39A-202ENST00000262676 AOPEPQ8N6M6 819 aa14.53□□□□□ -0.08
TTC39A-202ENST00000262676 CRNKL1Q9BZJ0 848 aaKnown RBP14.53□□□□□ -0.08
TTC39A-202ENST00000262676 PFDN4Q9NQP4 134 aa14.53□□□□□ -0.08
TTC39A-202ENST00000262676 CASQ2O14958 399 aaPredicted RBP14.52□□□□□ -0.08
TTC39A-202ENST00000262676 SP4Q02446 784 aa14.52□□□□□ -0.08
TTC39A-202ENST00000262676 UAP1Q16222 522 aaPredicted RBP14.52□□□□□ -0.08
TTC39A-202ENST00000262676 MTHFSDQ2M296 383 aaKnown RBP14.52□□□□□ -0.08
TTC39A-202ENST00000262676 TBX22Q9Y458 520 aa14.52□□□□□ -0.08
TTC39A-202ENST00000262676 ZNF335Q9H4Z2 1342 aaPredicted RBP14.52□□□□□ -0.08
TTC39A-202ENST00000262676 SYT1P21579 422 aa14.52□□□□□ -0.08
TTC39A-202ENST00000262676 ERCC5P28715 1186 aaPredicted RBP14.52□□□□□ -0.08
TTC39A-202ENST00000262676 RASSF4Q9H2L5 321 aa14.52□□□□□ -0.08
TTC39A-202ENST00000262676 KAT14Q9H8E8 782 aa14.52□□□□□ -0.08
TTC39A-202ENST00000262676 RMND1Q9NWS8 449 aa14.52□□□□□ -0.08
TTC39A-202ENST00000262676 TXNDC16Q9P2K2 825 aa14.52□□□□□ -0.08
TTC39A-202ENST00000262676 ORC3Q9UBD5 711 aaPredicted RBP14.52□□□□□ -0.08
TTC39A-202ENST00000262676 TSPY3P0CV98 308 aa14.52□□□□□ -0.09
TTC39A-202ENST00000262676 TSPY8P0CW00 308 aa14.52□□□□□ -0.09
TTC39A-202ENST00000262676 METAP2P50579 478 aaKnown RBP eCLIP14.52□□□□□ -0.09
TTC39A-202ENST00000262676 CLNS1AP54105 237 aaKnown RBP14.52□□□□□ -0.09
TTC39A-202ENST00000262676 ZYXQ15942 572 aaKnown RBP14.52□□□□□ -0.09
TTC39A-202ENST00000262676 VIMP08670 466 aaKnown RBP14.52□□□□□ -0.09
TTC39A-202ENST00000262676 STAT6P42226 847 aa14.52□□□□□ -0.09
TTC39A-202ENST00000262676 KCNQ4P56696 695 aa14.52□□□□□ -0.09
TTC39A-202ENST00000262676 PDE4BQ07343 736 aa14.52□□□□□ -0.09
TTC39A-202ENST00000262676 GTF3C6Q969F1 213 aa14.52□□□□□ -0.09
TTC39A-202ENST00000262676 RNF41Q9H4P4 317 aaPredicted RBP14.52□□□□□ -0.09
TTC39A-202ENST00000262676 PSMD6Q15008 389 aa14.52□□□□□ -0.09
TTC39A-202ENST00000262676 BUB1BO60566 1050 aaPredicted RBP14.51□□□□□ -0.09
TTC39A-202ENST00000262676 CTAGE1Q96RT6 745 aa14.51□□□□□ -0.09
TTC39A-202ENST00000262676 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.51□□□□□ -0.09
TTC39A-202ENST00000262676 SNX16P57768 344 aa14.51□□□□□ -0.09
TTC39A-202ENST00000262676 PPP1R7Q15435 360 aa14.51□□□□□ -0.09
TTC39A-202ENST00000262676 FAM76AQ8TAV0 307 aa14.51□□□□□ -0.09
TTC39A-202ENST00000262676 HOXC9P31274 260 aa14.51□□□□□ -0.09
TTC39A-202ENST00000262676 EP400NLQ6ZTU2 488 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms