RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 CTDSPL2Q05D32 466 aa13.85□□□□□ -0.19
SPG11-201ENST00000261866 DPP8Q6V1X1 898 aaPredicted RBP13.85□□□□□ -0.19
SPG11-201ENST00000261866 ERCC3P19447 782 aa13.84□□□□□ -0.19
SPG11-201ENST00000261866 ANKRD44Q8N8A2 993 aa13.84□□□□□ -0.19
SPG11-201ENST00000261866 PTPDC1A2A3K4 754 aa13.84□□□□□ -0.19
SPG11-201ENST00000261866 ZNF526Q8TF50 670 aaPredicted RBP13.84□□□□□ -0.19
SPG11-201ENST00000261866 H0YIN7 160 aa13.84□□□□□ -0.19
SPG11-201ENST00000261866 HIBADHP31937 336 aaKnown RBP13.84□□□□□ -0.19
SPG11-201ENST00000261866 ZNF790Q6PG37 636 aa13.84□□□□□ -0.19
SPG11-201ENST00000261866 SPAG5Q96R06 1193 aa13.84□□□□□ -0.19
SPG11-201ENST00000261866 ATP2C2O75185 946 aa13.84□□□□□ -0.19
SPG11-201ENST00000261866 PARP1P09874 1014 aaKnown RBP13.84□□□□□ -0.19
SPG11-201ENST00000261866 CBX1P83916 185 aa13.84□□□□□ -0.19
SPG11-201ENST00000261866 LETM2Q2VYF4 491 aa13.84□□□□□ -0.19
SPG11-201ENST00000261866 MAATS1Q7Z4T9 603 aa13.84□□□□□ -0.19
SPG11-201ENST00000261866 CPXCR1Q8N123 301 aa13.84□□□□□ -0.19
SPG11-201ENST00000261866 LINS1Q8NG48 757 aa13.84□□□□□ -0.19
SPG11-201ENST00000261866 GGA1Q9UJY5 639 aa13.84□□□□□ -0.19
SPG11-201ENST00000261866 TAF12Q16514 161 aa13.84□□□□□ -0.19
SPG11-201ENST00000261866 A0A1B0GUL7 405 aa13.83□□□□□ -0.19
SPG11-201ENST00000261866 UBASH3AP57075 661 aa13.83□□□□□ -0.19
SPG11-201ENST00000261866 CREB3L3Q68CJ9 461 aa13.83□□□□□ -0.19
SPG11-201ENST00000261866 INCENPQ9NQS7 918 aa13.83□□□□□ -0.19
SPG11-201ENST00000261866 IL16Q14005 1332 aa13.83□□□□□ -0.2
SPG11-201ENST00000261866 GPR162Q16538 588 aa13.83□□□□□ -0.2
SPG11-201ENST00000261866 AOPEPQ8N6M6 819 aa13.83□□□□□ -0.2
SPG11-201ENST00000261866 hCG_1642624A0A1W2PR95 340 aa13.83□□□□□ -0.2
SPG11-201ENST00000261866 AKR1B10O60218 316 aa13.83□□□□□ -0.2
SPG11-201ENST00000261866 AK2P54819 239 aa13.83□□□□□ -0.2
SPG11-201ENST00000261866 MYL10Q9BUA6 226 aa13.83□□□□□ -0.2
SPG11-201ENST00000261866 KIF18AQ8NI77 898 aa13.83□□□□□ -0.2
SPG11-201ENST00000261866 NOD1Q9Y239 953 aa13.83□□□□□ -0.2
SPG11-201ENST00000261866 KCNQ4P56696 695 aa13.82□□□□□ -0.2
SPG11-201ENST00000261866 DCAF17Q5H9S7 520 aaPredicted RBP13.82□□□□□ -0.2
SPG11-201ENST00000261866 GIMAP7Q8NHV1 300 aa13.82□□□□□ -0.2
SPG11-201ENST00000261866 PAIP2Q9BPZ3 127 aaKnown RBP13.82□□□□□ -0.2
SPG11-201ENST00000261866 DNAJC25Q9H1X3 360 aa13.82□□□□□ -0.2
SPG11-201ENST00000261866 TMOD4Q9NZQ9 345 aa13.82□□□□□ -0.2
SPG11-201ENST00000261866 ZSCAN23Q3MJ62 389 aa13.82□□□□□ -0.2
SPG11-201ENST00000261866 PDCL2Q8N4E4 241 aa13.82□□□□□ -0.2
SPG11-201ENST00000261866 VAMP4O75379 141 aa13.82□□□□□ -0.2
SPG11-201ENST00000261866 CCDC50Q8IVM0 306 aa13.82□□□□□ -0.2
SPG11-201ENST00000261866 DNAJC10Q8IXB1 793 aa13.82□□□□□ -0.2
SPG11-201ENST00000261866 YTHDC2Q9H6S0 1430 aaKnown RBP13.82□□□□□ -0.2
SPG11-201ENST00000261866 OTUD7AQ8TE49 926 aaPredicted RBP13.82□□□□□ -0.2
SPG11-201ENST00000261866 FAM107BQ9H098 131 aa13.82□□□□□ -0.2
SPG11-201ENST00000261866 XAGE2Q96GT9 111 aa13.82□□□□□ -0.2
SPG11-201ENST00000261866 EIF4G3O43432 1585 aaKnown RBP13.82□□□□□ -0.2
SPG11-201ENST00000261866 ATXN8OSP0DMR3 200 aa13.81□□□□□ -0.2
SPG11-201ENST00000261866 TMTC2Q8N394 836 aa13.81□□□□□ -0.2
SPG11-201ENST00000261866 CCDC66A2RUB6 948 aa13.81□□□□□ -0.2
SPG11-201ENST00000261866 MAPKAPK5Q8IW41 473 aa13.81□□□□□ -0.2
SPG11-201ENST00000261866 DDX23Q9BUQ8 820 aaKnown RBP13.81□□□□□ -0.2
SPG11-201ENST00000261866 VWA3AA6NCI4 1184 aa13.81□□□□□ -0.2
SPG11-201ENST00000261866 PDIA4P13667 645 aaKnown RBP13.81□□□□□ -0.2
SPG11-201ENST00000261866 NCBP1Q09161 790 aaKnown RBP13.81□□□□□ -0.2
SPG11-201ENST00000261866 PABPN1LA6NDY0 278 aaKnown RBP13.81□□□□□ -0.2
SPG11-201ENST00000261866 UBE2HP62256 183 aa13.81□□□□□ -0.2
SPG11-201ENST00000261866 KRT79Q5XKE5 535 aa13.81□□□□□ -0.2
SPG11-201ENST00000261866 RMND1Q9NWS8 449 aa13.81□□□□□ -0.2
SPG11-201ENST00000261866 RALGAPBQ86X10 1494 aa13.81□□□□□ -0.2
SPG11-201ENST00000261866 GNG11P61952 73 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 KANK3Q6NY19 840 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 DACT1Q9NYF0 836 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 DBNDD2Q9BQY9 259 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 ZMYND15Q9H091 742 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 RTL9Q8NET4 1388 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 CCNT1O60563 726 aaKnown RBP13.8□□□□□ -0.2
SPG11-201ENST00000261866 DOK7Q18PE1 504 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 TMCO4Q5TGY1 634 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 NUP153P49790 1475 aaKnown RBP13.8□□□□□ -0.2
SPG11-201ENST00000261866 TGFBRAP1Q8WUH2 860 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 LRRC27Q9C0I9 530 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 DENND2AQ9ULE3 1009 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 CCDC169A6NNP5 214 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 CSPG5O95196 566 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 STAMBPO95630 424 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 PLCG2P16885 1265 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 RAD51AP2Q09MP3 1159 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 GSTA5Q7RTV2 222 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 ZSCAN16Q9H4T2 348 aaPredicted RBP13.8□□□□□ -0.2
SPG11-201ENST00000261866 CCDC87Q9NVE4 849 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 UHRF1BP1Q6BDS2 1440 aa13.8□□□□□ -0.2
SPG11-201ENST00000261866 CCDC171Q6TFL3 1326 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 GNAQP50148 359 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 SNW1Q13573 536 aaKnown RBP13.79□□□□□ -0.2
SPG11-201ENST00000261866 NCOA5Q9HCD5 579 aaKnown RBP13.79□□□□□ -0.2
SPG11-201ENST00000261866 MAPK8IP1Q9UQF2 711 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 TRIM75PA6NK02 468 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 CAPZA3Q96KX2 299 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 GNAT2P19087 354 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 RAPGEF1Q13905 1077 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 RTL1A6NKG5 1358 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 CEP135Q66GS9 1140 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 ARHGAP27Q6ZUM4 889 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 SLAIN2Q9P270 581 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 KRT5P13647 590 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 ACTN2P35609 894 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 EP400NLQ6ZTU2 488 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 PIK3AP1Q6ZUJ8 805 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms