RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 PPIP5K2O43314 1243 aa14.36□□□□□ -0.11
PFDN1-201ENST00000261813 KIAA2012Q0VF49 1180 aa14.36□□□□□ -0.11
PFDN1-201ENST00000261813 ATG9AQ7Z3C6 839 aa14.36□□□□□ -0.11
PFDN1-201ENST00000261813 DICER1Q9UPY3 1922 aaKnown RBP14.36□□□□□ -0.11
PFDN1-201ENST00000261813 MROH5Q6ZUA9 1318 aa14.36□□□□□ -0.11
PFDN1-201ENST00000261813 RIMBP2O15034 1052 aa14.35□□□□□ -0.11
PFDN1-201ENST00000261813 CIAO1O76071 339 aa14.35□□□□□ -0.11
PFDN1-201ENST00000261813 WASHC4Q2M389 1173 aa14.35□□□□□ -0.11
PFDN1-201ENST00000261813 SIRT2Q8IXJ6 389 aa14.35□□□□□ -0.11
PFDN1-201ENST00000261813 LARGE2Q8N3Y3 721 aa14.35□□□□□ -0.11
PFDN1-201ENST00000261813 VGLL2Q8N8G2 317 aa14.35□□□□□ -0.11
PFDN1-201ENST00000261813 RBM46Q8TBY0 533 aaKnown RBP14.35□□□□□ -0.11
PFDN1-201ENST00000261813 EYA3Q99504 573 aa14.35□□□□□ -0.11
PFDN1-201ENST00000261813 VPS33BQ9H267 617 aa14.35□□□□□ -0.11
PFDN1-201ENST00000261813 NMRK2Q9NPI5 230 aa14.35□□□□□ -0.11
PFDN1-201ENST00000261813 LEMD3Q9Y2U8 911 aa14.35□□□□□ -0.11
PFDN1-201ENST00000261813 ZNF804BA4D1E1 1349 aa14.35□□□□□ -0.11
PFDN1-201ENST00000261813 KDM2BQ8NHM5 1336 aa14.35□□□□□ -0.11
PFDN1-201ENST00000261813 KLRK1P26718 216 aa14.34□□□□□ -0.11
PFDN1-201ENST00000261813 METTL24Q5JXM2 366 aa14.34□□□□□ -0.11
PFDN1-201ENST00000261813 TMEM92Q6UXU6 159 aa14.34□□□□□ -0.11
PFDN1-201ENST00000261813 TXNRD3Q86VQ6 643 aa14.34□□□□□ -0.11
PFDN1-201ENST00000261813 RPAP2Q8IXW5 612 aaPredicted RBP14.34□□□□□ -0.11
PFDN1-201ENST00000261813 DNAJC5GQ8N7S2 189 aa14.34□□□□□ -0.11
PFDN1-201ENST00000261813 MED23Q9ULK4 1368 aa14.34□□□□□ -0.11
PFDN1-201ENST00000261813 ZC3H4Q9UPT8 1303 aaKnown RBP14.34□□□□□ -0.11
PFDN1-201ENST00000261813 IRS2Q9Y4H2 1338 aa14.34□□□□□ -0.11
PFDN1-201ENST00000261813 PDE8BO95263 885 aa14.34□□□□□ -0.11
PFDN1-201ENST00000261813 FSTL1Q12841 308 aa14.34□□□□□ -0.11
PFDN1-201ENST00000261813 CCDC136Q96JN2 1154 aa14.34□□□□□ -0.11
PFDN1-201ENST00000261813 ZC3H12CQ9C0D7 883 aaKnown RBP14.34□□□□□ -0.11
PFDN1-201ENST00000261813 FZD9O00144 591 aa14.33□□□□□ -0.12
PFDN1-201ENST00000261813 IL15P40933 162 aaPredicted RBP14.33□□□□□ -0.12
PFDN1-201ENST00000261813 KCNJ4P48050 445 aa14.33□□□□□ -0.12
PFDN1-201ENST00000261813 NIM1KQ8IY84 436 aa14.33□□□□□ -0.12
PFDN1-201ENST00000261813 JDP2Q8WYK2 163 aa14.33□□□□□ -0.12
PFDN1-201ENST00000261813 DBNDD1Q9H9R9 158 aa14.33□□□□□ -0.12
PFDN1-201ENST00000261813 ZNF541Q9H0D2 1346 aa14.32□□□□□ -0.12
PFDN1-201ENST00000261813 YDJCA8MPS7 323 aa14.32□□□□□ -0.12
PFDN1-201ENST00000261813 FGFR2P21802 821 aa14.32□□□□□ -0.12
PFDN1-201ENST00000261813 UBE4AQ14139 1066 aa14.32□□□□□ -0.12
PFDN1-201ENST00000261813 DOK7Q18PE1 504 aa14.32□□□□□ -0.12
PFDN1-201ENST00000261813 NOP58Q9Y2X3 529 aaKnown RBP14.32□□□□□ -0.12
PFDN1-201ENST00000261813 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.32□□□□□ -0.12
PFDN1-201ENST00000261813 ECE2O60344 883 aa14.31□□□□□ -0.12
PFDN1-201ENST00000261813 SURF6O75683 361 aaKnown RBP14.31□□□□□ -0.12
PFDN1-201ENST00000261813 G3BP1Q13283 466 aaKnown RBP eCLIP14.31□□□□□ -0.12
PFDN1-201ENST00000261813 C15orf52Q6ZUT6 534 aaKnown RBP14.31□□□□□ -0.12
PFDN1-201ENST00000261813 ZNRF3Q9ULT6 936 aa14.31□□□□□ -0.12
PFDN1-201ENST00000261813 PCDHB15Q9Y5E8 787 aa14.31□□□□□ -0.12
PFDN1-201ENST00000261813 SASH1O94885 1247 aa14.3□□□□□ -0.12
PFDN1-201ENST00000261813 TFCP2Q12800 502 aa14.3□□□□□ -0.12
PFDN1-201ENST00000261813 PUM3Q15397 648 aaKnown RBP14.3□□□□□ -0.12
PFDN1-201ENST00000261813 KLRG1Q96E93 195 aa14.3□□□□□ -0.12
PFDN1-201ENST00000261813 CEP126Q9P2H0 1117 aa14.3□□□□□ -0.12
PFDN1-201ENST00000261813 GLTPD2A6NH11 291 aa14.29□□□□□ -0.12
PFDN1-201ENST00000261813 HMMRO75330 724 aa14.29□□□□□ -0.12
PFDN1-201ENST00000261813 RWDD1Q9H446 243 aaPredicted RBP14.29□□□□□ -0.12
PFDN1-201ENST00000261813 KCNQ5Q9NR82 932 aa14.29□□□□□ -0.12
PFDN1-201ENST00000261813 EXOC6BQ9Y2D4 811 aa14.29□□□□□ -0.12
PFDN1-201ENST00000261813 DDNO94850 711 aaPredicted RBP14.28□□□□□ -0.12
PFDN1-201ENST00000261813 GYG1P46976 350 aa14.28□□□□□ -0.12
PFDN1-201ENST00000261813 EIF6P56537 245 aaKnown RBP14.28□□□□□ -0.12
PFDN1-201ENST00000261813 CXCL9Q07325 125 aa14.28□□□□□ -0.12
PFDN1-201ENST00000261813 ATP2B3Q16720 1220 aa14.28□□□□□ -0.12
PFDN1-201ENST00000261813 LPIN2Q92539 896 aa14.28□□□□□ -0.12
PFDN1-201ENST00000261813 FAM84BQ96KN1 310 aaPredicted RBP14.28□□□□□ -0.12
PFDN1-201ENST00000261813 COA1Q9GZY4 146 aa14.28□□□□□ -0.12
PFDN1-201ENST00000261813 RAD17O75943 681 aa14.27□□□□□ -0.12
PFDN1-201ENST00000261813 OS9Q13438 667 aaPredicted RBP14.27□□□□□ -0.12
PFDN1-201ENST00000261813 SMC1BQ8NDV3 1235 aa14.27□□□□□ -0.12
PFDN1-201ENST00000261813 RRAGCQ9HB90 399 aa14.27□□□□□ -0.12
PFDN1-201ENST00000261813 CD209Q9NNX6 404 aa14.27□□□□□ -0.12
PFDN1-201ENST00000261813 ZNF609O15014 1411 aa14.27□□□□□ -0.13
PFDN1-201ENST00000261813 SCN9AQ15858 1988 aa14.27□□□□□ -0.13
PFDN1-201ENST00000261813 IFIT1P09914 478 aaKnown RBP14.26□□□□□ -0.13
PFDN1-201ENST00000261813 SLC5A1P13866 664 aa14.26□□□□□ -0.13
PFDN1-201ENST00000261813 TIMM10P62072 90 aa14.26□□□□□ -0.13
PFDN1-201ENST00000261813 LCE2DQ5TA82 110 aaPredicted RBP14.26□□□□□ -0.13
PFDN1-201ENST00000261813 CIAPIN1Q6FI81 312 aa14.26□□□□□ -0.13
PFDN1-201ENST00000261813 ZNF804AQ7Z570 1209 aa14.26□□□□□ -0.13
PFDN1-201ENST00000261813 PODNQ7Z5L7 613 aa14.26□□□□□ -0.13
PFDN1-201ENST00000261813 FBXO33Q7Z6M2 555 aa14.26□□□□□ -0.13
PFDN1-201ENST00000261813 GPC2Q8N158 579 aa14.26□□□□□ -0.13
PFDN1-201ENST00000261813 JMYQ8N9B5 988 aa14.26□□□□□ -0.13
PFDN1-201ENST00000261813 ARAP2Q8WZ64 1704 aa14.26□□□□□ -0.13
PFDN1-201ENST00000261813 WDR90Q96KV7 1748 aa14.26□□□□□ -0.13
PFDN1-201ENST00000261813 A0A1B0GUL7 405 aa14.25□□□□□ -0.13
PFDN1-201ENST00000261813 PSMD14O00487 310 aa14.25□□□□□ -0.13
PFDN1-201ENST00000261813 SNPHO15079 494 aa14.25□□□□□ -0.13
PFDN1-201ENST00000261813 IL1R1P14778 569 aa14.25□□□□□ -0.13
PFDN1-201ENST00000261813 ADORA1P30542 326 aa14.25□□□□□ -0.13
PFDN1-201ENST00000261813 HIBADHP31937 336 aaKnown RBP14.25□□□□□ -0.13
PFDN1-201ENST00000261813 HTRA3P83110 453 aa14.25□□□□□ -0.13
PFDN1-201ENST00000261813 GJA3Q9Y6H8 435 aa14.25□□□□□ -0.13
PFDN1-201ENST00000261813 ZNF646O15015 1829 aaPredicted RBP14.25□□□□□ -0.13
PFDN1-201ENST00000261813 BCAMP50895 628 aa14.24□□□□□ -0.13
PFDN1-201ENST00000261813 HDAC1Q13547 482 aaPredicted RBP14.24□□□□□ -0.13
PFDN1-201ENST00000261813 HSP90AB4PQ58FF6 505 aa14.24□□□□□ -0.13
PFDN1-201ENST00000261813 TNNI3KQ59H18 835 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms