RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 ZNF75DP51815 510 aa12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 PHLDB2Q86SQ0 1253 aa12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 TACO1Q9BSH4 297 aaKnown RBP12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 SLC8A1P32418 973 aa12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 STAT6P42226 847 aa12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 SH3BGRP55822 239 aaPredicted RBP12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 ESYT1Q9BSJ8 1104 aa12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.12□□□□□ -0.47
SLC6A4-201ENST00000261707 ZNF500O60304 480 aaPredicted RBP12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 ZNF131P52739 623 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 MAP7Q14244 749 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 KMT5BQ4FZB7 885 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 TRIM68Q6AZZ1 485 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 KCNH5Q8NCM2 988 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 DDX27Q96GQ7 796 aaKnown RBP12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 TMEM67Q5HYA8 995 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 C8orf74Q6P047 294 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 MCUR1Q96AQ8 359 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 FERMT1Q9BQL6 677 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 ECHDC1Q9NTX5 307 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 HFM1A2PYH4 1435 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 RANBP6O60518 1105 aaKnown RBP12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 IQCA1Q86XH1 822 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 ERICH3Q5RHP9 1530 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 F6X3S4 739 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 GPHNQ9NQX3 736 aaPredicted RBP12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 NOC2LQ9Y3T9 749 aaKnown RBP12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 MSH6P52701 1360 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 STK25O00506 426 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 ERCC3P19447 782 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 LIG3P49916 1009 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 PPFIA1Q13136 1202 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 PPP1R7Q15435 360 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 CCDC26Q8TAB7 109 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 BRF1Q92994 677 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 PSMA7O14818 248 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 BAG6P46379 1132 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 MUM1Q2TAK8 710 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 MICU3Q86XE3 530 aa12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 RNF41Q9H4P4 317 aaPredicted RBP12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 TRMT112Q9UI30 125 aaKnown RBP12.11□□□□□ -0.47
SLC6A4-201ENST00000261707 SPTLC2O15270 562 aa12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 PTPRCP08575 1304 aa12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 ARID5AQ03989 594 aa12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 CFAP157Q5JU67 520 aa12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 NBPF6Q5VWK0 638 aa12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 NBPF5PQ86XG9 351 aaPredicted RBP12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 VSIG1Q86XK7 387 aa12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 IFT20Q8IY31 132 aa12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 NBPF4Q96M43 638 aa12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 TTF2Q9UNY4 1162 aaKnown RBP12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 SNCBQ16143 134 aa12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 ZNF692Q9BU19 519 aaPredicted RBP12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 TSPYL2Q9H2G4 693 aaPredicted RBP12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 DIXDC1Q155Q3 683 aa12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 STXBP4Q6ZWJ1 553 aa12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 NCOA7Q8NI08 942 aa12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 BICD1Q96G01 975 aa12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 STK38LQ9Y2H1 464 aa12.1□□□□□ -0.47
SLC6A4-201ENST00000261707 CADPSQ9ULU8 1353 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 TXNDC9O14530 226 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 CETN3O15182 167 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 LUC7L3O95232 432 aaKnown RBP12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 CABP1Q9NZU7 370 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 CALCOCO2Q13137 446 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 SPATS2Q86XZ4 545 aaKnown RBP12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 GPR161Q8N6U8 529 aaKnown RBP12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 KIAA1524Q8TCG1 905 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 ALG1Q9BT22 464 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 EFCC1Q9HA90 598 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 PCDHB15Q9Y5E8 787 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 F8W031 263 aaPredicted RBP12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 HGSO14964 777 aaPredicted RBP12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 PFDN1O60925 122 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 SLC5A1P13866 664 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 STX17P56962 302 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 ARHGEF6Q15052 776 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 SYCP3Q8IZU3 236 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 SEC24BO95487 1268 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 GNGT1P63211 74 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 FLIIQ13045 1269 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 RUFY4Q6ZNE9 571 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 MCM10Q7L590 875 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 CCDC170Q8IYT3 715 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 DHX58Q96C10 678 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 INTS4Q96HW7 963 aaKnown RBP12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 RRP15Q9Y3B9 282 aaKnown RBP12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 NPHP3Q7Z494 1330 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 BMP15O95972 392 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 ARHGAP24Q8N264 748 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 IMPACTQ9P2X3 320 aa12.09□□□□□ -0.47
SLC6A4-201ENST00000261707 EIF6P56537 245 aaKnown RBP12.08□□□□□ -0.47
SLC6A4-201ENST00000261707 MYL5Q02045 173 aa12.08□□□□□ -0.47
SLC6A4-201ENST00000261707 TMCO4Q5TGY1 634 aa12.08□□□□□ -0.47
SLC6A4-201ENST00000261707 KLF18A0A0U1RQI7 1052 aa12.08□□□□□ -0.48
SLC6A4-201ENST00000261707 GNAT3A8MTJ3 354 aa12.08□□□□□ -0.48
SLC6A4-201ENST00000261707 ATP2A2P16615 1042 aaKnown RBP12.08□□□□□ -0.48
SLC6A4-201ENST00000261707 TTF1Q15361 905 aaPredicted RBP12.08□□□□□ -0.48
SLC6A4-201ENST00000261707 Q6ZUG5 572 aa12.08□□□□□ -0.48
SLC6A4-201ENST00000261707 RAB3IPQ96QF0 476 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms