RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 USP17L4A6NCW7 530 aa25.27■■□□□ 1.64
RTCA-201ENST00000260563 TNIP1Q15025 636 aa25.27■■□□□ 1.64
RTCA-201ENST00000260563 USP17L1Q7RTZ2 530 aa25.27■■□□□ 1.64
RTCA-201ENST00000260563 OTUD7AQ8TE49 926 aaPredicted RBP25.27■■□□□ 1.64
RTCA-201ENST00000260563 GPATCH3Q96I76 525 aa25.27■■□□□ 1.64
RTCA-201ENST00000260563 DENND2AQ9ULE3 1009 aa25.27■■□□□ 1.64
RTCA-201ENST00000260563 PSMD14O00487 310 aa25.27■■□□□ 1.64
RTCA-201ENST00000260563 GTF2IP78347 998 aa25.27■■□□□ 1.64
RTCA-201ENST00000260563 STRIP1Q5VSL9 837 aa25.27■■□□□ 1.64
RTCA-201ENST00000260563 TTLL5Q6EMB2 1281 aa25.27■■□□□ 1.64
RTCA-201ENST00000260563 PLEKHM2Q8IWE5 1019 aa25.27■■□□□ 1.64
RTCA-201ENST00000260563 ZBTB22O15209 634 aa25.26■■□□□ 1.63
RTCA-201ENST00000260563 CHAF1AQ13111 956 aaPredicted RBP25.26■■□□□ 1.63
RTCA-201ENST00000260563 RASGRF1Q13972 1273 aa25.26■■□□□ 1.63
RTCA-201ENST00000260563 DPY19L2Q6NUT2 758 aa25.26■■□□□ 1.63
RTCA-201ENST00000260563 ZNF512BQ96KM6 892 aaPredicted RBP25.26■■□□□ 1.63
RTCA-201ENST00000260563 JAG2Q9Y219 1238 aa25.26■■□□□ 1.63
RTCA-201ENST00000260563 GJA3Q9Y6H8 435 aa25.26■■□□□ 1.63
RTCA-201ENST00000260563 SALL3Q9BXA9 1300 aa25.25■■□□□ 1.63
RTCA-201ENST00000260563 WDR90Q96KV7 1748 aa25.25■■□□□ 1.63
RTCA-201ENST00000260563 GPC2Q8N158 579 aa25.25■■□□□ 1.63
RTCA-201ENST00000260563 MYO5AQ9Y4I1 1855 aaKnown RBP25.25■■□□□ 1.63
RTCA-201ENST00000260563 FAM205AQ6ZU69 1335 aa25.25■■□□□ 1.63
RTCA-201ENST00000260563 MX1P20591 662 aa25.24■■□□□ 1.63
RTCA-201ENST00000260563 MCAMP43121 646 aa25.24■■□□□ 1.63
RTCA-201ENST00000260563 SCN4AP35499 1836 aa25.24■■□□□ 1.63
RTCA-201ENST00000260563 DOCK2Q92608 1830 aa25.24■■□□□ 1.63
RTCA-201ENST00000260563 PDS5AQ29RF7 1337 aaKnown RBP25.24■■□□□ 1.63
RTCA-201ENST00000260563 MYO3BQ8WXR4 1341 aa25.23■■□□□ 1.63
RTCA-201ENST00000260563 MAST2Q6P0Q8 1798 aa25.23■■□□□ 1.63
RTCA-201ENST00000260563 GLTPD2A6NH11 291 aa25.22■■□□□ 1.63
RTCA-201ENST00000260563 VIL1P09327 827 aaKnown RBP25.22■■□□□ 1.63
RTCA-201ENST00000260563 DACT2Q5SW24 774 aa25.22■■□□□ 1.63
RTCA-201ENST00000260563 RSBN1LQ6PCB5 846 aaPredicted RBP25.22■■□□□ 1.63
RTCA-201ENST00000260563 SPATA5Q8NB90 893 aa25.22■■□□□ 1.63
RTCA-201ENST00000260563 ECHDC1Q9NTX5 307 aa25.22■■□□□ 1.63
RTCA-201ENST00000260563 TTC41PQ6P2S7 1318 aa25.22■■□□□ 1.63
RTCA-201ENST00000260563 DDNO94850 711 aaPredicted RBP25.22■■□□□ 1.63
RTCA-201ENST00000260563 PDE1AP54750 535 aa25.22■■□□□ 1.63
RTCA-201ENST00000260563 SCARF1Q14162 830 aa25.22■■□□□ 1.63
RTCA-201ENST00000260563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.22■■□□□ 1.63
RTCA-201ENST00000260563 TBC1D22AQ8WUA7 517 aa25.22■■□□□ 1.63
RTCA-201ENST00000260563 OSBPL3Q9H4L5 887 aa25.22■■□□□ 1.63
RTCA-201ENST00000260563 HMG20BQ9P0W2 317 aa25.22■■□□□ 1.63
RTCA-201ENST00000260563 MYH7P12883 1935 aa25.21■■□□□ 1.63
RTCA-201ENST00000260563 MFSD14BQ5SR56 506 aa25.21■■□□□ 1.63
RTCA-201ENST00000260563 WDR66Q8TBY9 1149 aa25.21■■□□□ 1.63
RTCA-201ENST00000260563 STAP2Q9UGK3 403 aa25.21■■□□□ 1.63
RTCA-201ENST00000260563 AK9Q5TCS8 1911 aa25.2■■□□□ 1.62
RTCA-201ENST00000260563 FKBP1AP62942 108 aaKnown RBP25.2■■□□□ 1.62
RTCA-201ENST00000260563 PI16Q6UXB8 463 aa25.2■■□□□ 1.62
RTCA-201ENST00000260563 MXD3Q9BW11 206 aa25.2■■□□□ 1.62
RTCA-201ENST00000260563 ATP5JP18859 108 aa25.19■■□□□ 1.62
RTCA-201ENST00000260563 RPS12P25398 132 aaKnown RBP25.19■■□□□ 1.62
RTCA-201ENST00000260563 TSHZ3Q63HK5 1081 aa25.19■■□□□ 1.62
RTCA-201ENST00000260563 AGBL3Q8NEM8 1001 aa25.19■■□□□ 1.62
RTCA-201ENST00000260563 ZBTB12Q9Y330 459 aaPredicted RBP25.19■■□□□ 1.62
RTCA-201ENST00000260563 SALL1Q9NSC2 1324 aa25.19■■□□□ 1.62
RTCA-201ENST00000260563 ERC2O15083 957 aa25.18■■□□□ 1.62
RTCA-201ENST00000260563 ZGPATQ8N5A5 531 aaKnown RBP25.18■■□□□ 1.62
RTCA-201ENST00000260563 SNRKQ9NRH2 765 aa25.18■■□□□ 1.62
RTCA-201ENST00000260563 AOX1Q06278 1338 aa25.18■■□□□ 1.62
RTCA-201ENST00000260563 GMPSP49915 693 aaPredicted RBP25.17■■□□□ 1.62
RTCA-201ENST00000260563 CERS5Q8N5B7 392 aa25.17■■□□□ 1.62
RTCA-201ENST00000260563 BOLA2Q9H3K6 86 aa25.17■■□□□ 1.62
RTCA-201ENST00000260563 ADAMTSL1Q8N6G6 1762 aa25.17■■□□□ 1.62
RTCA-201ENST00000260563 ZAP70P43403 619 aa25.17■■□□□ 1.62
RTCA-201ENST00000260563 L3MBTL3Q96JM7 780 aaPredicted RBP25.17■■□□□ 1.62
RTCA-201ENST00000260563 DNAJC2Q99543 621 aaKnown RBP25.17■■□□□ 1.62
RTCA-201ENST00000260563 MYH2Q9UKX2 1941 aa25.16■■□□□ 1.62
RTCA-201ENST00000260563 TTC22Q5TAA0 569 aa25.16■■□□□ 1.62
RTCA-201ENST00000260563 NDUFB9Q9Y6M9 179 aa25.16■■□□□ 1.62
RTCA-201ENST00000260563 GLRX3O76003 335 aaKnown RBP25.15■■□□□ 1.62
RTCA-201ENST00000260563 YY1P25490 414 aa25.15■■□□□ 1.62
RTCA-201ENST00000260563 LMOD1P29536 600 aaPredicted RBP25.15■■□□□ 1.62
RTCA-201ENST00000260563 SCNN1DP51172 638 aa25.15■■□□□ 1.62
RTCA-201ENST00000260563 KIAA0825Q8IV33 1275 aa25.15■■□□□ 1.62
RTCA-201ENST00000260563 PI4K2BQ8TCG2 481 aa25.15■■□□□ 1.62
RTCA-201ENST00000260563 DPF2Q92785 391 aa25.15■■□□□ 1.62
RTCA-201ENST00000260563 ABCF2Q9UG63 623 aa25.15■■□□□ 1.62
RTCA-201ENST00000260563 ECM29Q5VYK3 1845 aa25.15■■□□□ 1.62
RTCA-201ENST00000260563 ZNF526Q8TF50 670 aaPredicted RBP25.14■■□□□ 1.62
RTCA-201ENST00000260563 GMLQ99445 158 aa25.14■■□□□ 1.62
RTCA-201ENST00000260563 HAUS7Q99871 368 aa25.14■■□□□ 1.62
RTCA-201ENST00000260563 SUGT1Q9Y2Z0 365 aa25.14■■□□□ 1.62
RTCA-201ENST00000260563 F8W031 263 aaPredicted RBP25.13■■□□□ 1.61
RTCA-201ENST00000260563 CYP2E1P05181 493 aaPredicted RBP25.13■■□□□ 1.61
RTCA-201ENST00000260563 BMP2KLQ5H9B9 411 aa25.13■■□□□ 1.61
RTCA-201ENST00000260563 GSPT1P15170 499 aaKnown RBP25.12■■□□□ 1.61
RTCA-201ENST00000260563 PRDX5P30044 214 aa25.12■■□□□ 1.61
RTCA-201ENST00000260563 SPTY2D1Q68D10 685 aaPredicted RBP25.12■■□□□ 1.61
RTCA-201ENST00000260563 MICALL2Q8IY33 904 aa25.12■■□□□ 1.61
RTCA-201ENST00000260563 PAG1Q9NWQ8 432 aa25.12■■□□□ 1.61
RTCA-201ENST00000260563 GPRC5DQ9NZD1 345 aa25.12■■□□□ 1.61
RTCA-201ENST00000260563 HDAC9Q9UKV0 1011 aa25.12■■□□□ 1.61
RTCA-201ENST00000260563 MAST3O60307 1309 aa25.12■■□□□ 1.61
RTCA-201ENST00000260563 IQCA1LA6NCM1 817 aa25.12■■□□□ 1.61
RTCA-201ENST00000260563 LDHBP07195 334 aaKnown RBP25.12■■□□□ 1.61
RTCA-201ENST00000260563 USP17L8P0C7I0 530 aa25.12■■□□□ 1.61
RTCA-201ENST00000260563 TTF1Q15361 905 aaPredicted RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms