RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 ADD1P35611 737 aaKnown RBP17.43■□□□□ 0.38
RIPK1-201ENST00000259808 TRMT44Q8IYL2 757 aaKnown RBP17.43■□□□□ 0.38
RIPK1-201ENST00000259808 KIAA0232Q92628 1395 aa17.43■□□□□ 0.38
RIPK1-201ENST00000259808 NEMFO60524 1076 aa17.43■□□□□ 0.38
RIPK1-201ENST00000259808 FAM160A1Q05DH4 1040 aa17.43■□□□□ 0.38
RIPK1-201ENST00000259808 FKBP15Q5T1M5 1219 aa17.43■□□□□ 0.38
RIPK1-201ENST00000259808 PI16Q6UXB8 463 aa17.43■□□□□ 0.38
RIPK1-201ENST00000259808 DZIP3Q86Y13 1208 aaKnown RBP17.43■□□□□ 0.38
RIPK1-201ENST00000259808 RNF41Q9H4P4 317 aaPredicted RBP17.43■□□□□ 0.38
RIPK1-201ENST00000259808 C6orf229H3BNL8 230 aa17.43■□□□□ 0.38
RIPK1-201ENST00000259808 ZPR1O75312 459 aa17.43■□□□□ 0.38
RIPK1-201ENST00000259808 LMAN1P49257 510 aa17.43■□□□□ 0.38
RIPK1-201ENST00000259808 CTDSPL2Q05D32 466 aa17.43■□□□□ 0.38
RIPK1-201ENST00000259808 FBXO3Q9UK99 471 aa17.43■□□□□ 0.38
RIPK1-201ENST00000259808 ATP6V1AP38606 617 aa17.43■□□□□ 0.38
RIPK1-201ENST00000259808 ZNF75DP51815 510 aa17.43■□□□□ 0.38
RIPK1-201ENST00000259808 TTF1Q15361 905 aaPredicted RBP17.43■□□□□ 0.38
RIPK1-201ENST00000259808 DBNLQ9UJU6 430 aaKnown RBP17.43■□□□□ 0.38
RIPK1-201ENST00000259808 PAXBP1Q9Y5B6 917 aa17.43■□□□□ 0.38
RIPK1-201ENST00000259808 IFIT1BQ5T764 474 aaKnown RBP17.42■□□□□ 0.38
RIPK1-201ENST00000259808 MYO1BO43795 1136 aa17.42■□□□□ 0.38
RIPK1-201ENST00000259808 ZFYP08048 801 aaPredicted RBP17.42■□□□□ 0.38
RIPK1-201ENST00000259808 ITGA6P23229 1130 aa17.42■□□□□ 0.38
RIPK1-201ENST00000259808 LONRF3Q496Y0 759 aa17.42■□□□□ 0.38
RIPK1-201ENST00000259808 CLSTN2Q9H4D0 955 aa17.42■□□□□ 0.38
RIPK1-201ENST00000259808 MLH3Q9UHC1 1453 aa17.42■□□□□ 0.38
RIPK1-201ENST00000259808 CCT6AP40227 531 aaKnown RBP17.42■□□□□ 0.38
RIPK1-201ENST00000259808 ZNF174Q15697 407 aa17.42■□□□□ 0.38
RIPK1-201ENST00000259808 CACNA2D4Q7Z3S7 1137 aa17.42■□□□□ 0.38
RIPK1-201ENST00000259808 EEF2KMTQ96G04 330 aa17.42■□□□□ 0.38
RIPK1-201ENST00000259808 SLC52A2Q9HAB3 445 aa17.42■□□□□ 0.38
RIPK1-201ENST00000259808 GPHNQ9NQX3 736 aaPredicted RBP17.42■□□□□ 0.38
RIPK1-201ENST00000259808 E7EWF7 191 aa17.41■□□□□ 0.38
RIPK1-201ENST00000259808 SLU7O95391 586 aaKnown RBP17.41■□□□□ 0.38
RIPK1-201ENST00000259808 ZNF827Q17R98 1081 aa17.41■□□□□ 0.38
RIPK1-201ENST00000259808 CCDC96Q2M329 555 aa17.41■□□□□ 0.38
RIPK1-201ENST00000259808 GJB4Q9NTQ9 266 aa17.41■□□□□ 0.38
RIPK1-201ENST00000259808 MCM7P33993 719 aa17.41■□□□□ 0.38
RIPK1-201ENST00000259808 TRIM47Q96LD4 638 aa17.41■□□□□ 0.38
RIPK1-201ENST00000259808 CRACR2AQ9BSW2 395 aa17.41■□□□□ 0.38
RIPK1-201ENST00000259808 ELF2Q15723 593 aa17.4■□□□□ 0.38
RIPK1-201ENST00000259808 CCDC178Q5BJE1 867 aa17.4■□□□□ 0.38
RIPK1-201ENST00000259808 CWC15Q9P013 229 aaKnown RBP17.4■□□□□ 0.38
RIPK1-201ENST00000259808 ZDHHC9Q9Y397 364 aa17.4■□□□□ 0.38
RIPK1-201ENST00000259808 CLTCL1P53675 1640 aa17.4■□□□□ 0.38
RIPK1-201ENST00000259808 AEBP2Q6ZN18 517 aaPredicted RBP17.4■□□□□ 0.38
RIPK1-201ENST00000259808 BCL2L12Q9HB09 334 aa17.4■□□□□ 0.38
RIPK1-201ENST00000259808 JADE2Q9NQC1 790 aa17.4■□□□□ 0.38
RIPK1-201ENST00000259808 VWA3AA6NCI4 1184 aa17.4■□□□□ 0.38
RIPK1-201ENST00000259808 EIF3JO75822 258 aaKnown RBP17.4■□□□□ 0.38
RIPK1-201ENST00000259808 CHGBP05060 677 aa17.4■□□□□ 0.38
RIPK1-201ENST00000259808 RHOXF2BP0C7M4 288 aa17.4■□□□□ 0.38
RIPK1-201ENST00000259808 IL2RBP14784 551 aa17.4■□□□□ 0.38
RIPK1-201ENST00000259808 CCDC150Q8NCX0 1101 aa17.4■□□□□ 0.38
RIPK1-201ENST00000259808 RHOXF2Q9BQY4 288 aa17.4■□□□□ 0.38
RIPK1-201ENST00000259808 SEC63Q9UGP8 760 aaKnown RBP17.4■□□□□ 0.38
RIPK1-201ENST00000259808 ZNF202O95125 648 aa17.39■□□□□ 0.37
RIPK1-201ENST00000259808 CAVIN2O95810 425 aa17.39■□□□□ 0.37
RIPK1-201ENST00000259808 HEATR3Q7Z4Q2 680 aa17.39■□□□□ 0.37
RIPK1-201ENST00000259808 ZSWIM6Q9HCJ5 1215 aa17.39■□□□□ 0.37
RIPK1-201ENST00000259808 BMP2KQ9NSY1 1161 aaPredicted RBP17.39■□□□□ 0.37
RIPK1-201ENST00000259808 CYP21A2P08686 494 aa17.39■□□□□ 0.37
RIPK1-201ENST00000259808 ARID5AQ03989 594 aa17.39■□□□□ 0.37
RIPK1-201ENST00000259808 SPA17Q15506 151 aa17.39■□□□□ 0.37
RIPK1-201ENST00000259808 PLBD2Q8NHP8 589 aa17.39■□□□□ 0.37
RIPK1-201ENST00000259808 CAPZA3Q96KX2 299 aa17.39■□□□□ 0.37
RIPK1-201ENST00000259808 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.39■□□□□ 0.37
RIPK1-201ENST00000259808 BTG4Q9NY30 223 aa17.39■□□□□ 0.37
RIPK1-201ENST00000259808 POLR2DO15514 142 aaKnown RBP17.39■□□□□ 0.37
RIPK1-201ENST00000259808 SETQ01105 290 aaPredicted RBP17.39■□□□□ 0.37
RIPK1-201ENST00000259808 ODF2Q5BJF6 829 aa17.39■□□□□ 0.37
RIPK1-201ENST00000259808 ANO1Q5XXA6 986 aa17.39■□□□□ 0.37
RIPK1-201ENST00000259808 NAA16Q6N069 864 aaPredicted RBP17.39■□□□□ 0.37
RIPK1-201ENST00000259808 ZNF652Q9Y2D9 606 aa17.39■□□□□ 0.37
RIPK1-201ENST00000259808 TRIM75PA6NK02 468 aa17.38■□□□□ 0.37
RIPK1-201ENST00000259808 ZNF76P36508 570 aa17.38■□□□□ 0.37
RIPK1-201ENST00000259808 GOLGA8FQ08AF8 430 aa17.38■□□□□ 0.37
RIPK1-201ENST00000259808 GOLGA8DPQ0D2H9 430 aa17.38■□□□□ 0.37
RIPK1-201ENST00000259808 TCERG1LQ5VWI1 586 aa17.38■□□□□ 0.37
RIPK1-201ENST00000259808 TAX1BP1Q86VP1 789 aa17.38■□□□□ 0.37
RIPK1-201ENST00000259808 KRT222Q8N1A0 295 aa17.38■□□□□ 0.37
RIPK1-201ENST00000259808 CCDC94Q9BW85 323 aaPredicted RBP17.38■□□□□ 0.37
RIPK1-201ENST00000259808 KAT14Q9H8E8 782 aa17.38■□□□□ 0.37
RIPK1-201ENST00000259808 TRIM21P19474 475 aaKnown RBP17.38■□□□□ 0.37
RIPK1-201ENST00000259808 ESR2Q92731 530 aa17.38■□□□□ 0.37
RIPK1-201ENST00000259808 COBLO75128 1261 aa17.38■□□□□ 0.37
RIPK1-201ENST00000259808 ADORA1P30542 326 aa17.37■□□□□ 0.37
RIPK1-201ENST00000259808 UQCRFS1P1P0C7P4 283 aa17.37■□□□□ 0.37
RIPK1-201ENST00000259808 DIS3L2Q8IYB7 885 aaKnown RBP17.37■□□□□ 0.37
RIPK1-201ENST00000259808 MYRIPQ8NFW9 859 aa17.37■□□□□ 0.37
RIPK1-201ENST00000259808 CDC5LQ99459 802 aaKnown RBP17.37■□□□□ 0.37
RIPK1-201ENST00000259808 XPO4Q9C0E2 1151 aaKnown RBP17.37■□□□□ 0.37
RIPK1-201ENST00000259808 FAM107BQ9H098 131 aa17.37■□□□□ 0.37
RIPK1-201ENST00000259808 GUCA1BQ9UMX6 200 aa17.37■□□□□ 0.37
RIPK1-201ENST00000259808 YEATS4O95619 227 aa17.37■□□□□ 0.37
RIPK1-201ENST00000259808 VPS16Q9H269 839 aa17.37■□□□□ 0.37
RIPK1-201ENST00000259808 MMRN2Q9H8L6 949 aa17.37■□□□□ 0.37
RIPK1-201ENST00000259808 SASH1O94885 1247 aa17.36■□□□□ 0.37
RIPK1-201ENST00000259808 CCDC148Q8NFR7 591 aa17.36■□□□□ 0.37
RIPK1-201ENST00000259808 CLIC6Q96NY7 704 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms