RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 RASAL3Q86YV0 1011 aa23.96■■□□□ 1.43
TM6SF1-201ENST00000258909 ANKRD44Q8N8A2 993 aa23.96■■□□□ 1.43
TM6SF1-201ENST00000258909 ABHD8Q96I13 439 aa23.96■■□□□ 1.43
TM6SF1-201ENST00000258909 ZBED3Q96IU2 234 aaPredicted RBP23.96■■□□□ 1.43
TM6SF1-201ENST00000258909 GYG1P46976 350 aa23.95■■□□□ 1.42
TM6SF1-201ENST00000258909 MMP14P50281 582 aa23.95■■□□□ 1.42
TM6SF1-201ENST00000258909 PRKG1Q13976 671 aa23.94■■□□□ 1.42
TM6SF1-201ENST00000258909 DLGAP5Q15398 846 aa23.94■■□□□ 1.42
TM6SF1-201ENST00000258909 CSRNP1Q96S65 589 aa23.94■■□□□ 1.42
TM6SF1-201ENST00000258909 RIPOR2Q9Y4F9 1068 aa23.94■■□□□ 1.42
TM6SF1-201ENST00000258909 RABL6Q3YEC7 729 aaPredicted RBP23.94■■□□□ 1.42
TM6SF1-201ENST00000258909 LRRC24Q50LG9 513 aa23.94■■□□□ 1.42
TM6SF1-201ENST00000258909 USP44Q9H0E7 712 aa23.94■■□□□ 1.42
TM6SF1-201ENST00000258909 SMC4Q9NTJ3 1288 aa23.94■■□□□ 1.42
TM6SF1-201ENST00000258909 AKAP11Q9UKA4 1901 aa23.93■■□□□ 1.42
TM6SF1-201ENST00000258909 UBE4AQ14139 1066 aa23.93■■□□□ 1.42
TM6SF1-201ENST00000258909 APOBEC3FQ8IUX4 373 aaKnown RBP23.93■■□□□ 1.42
TM6SF1-201ENST00000258909 KLHDC4Q8TBB5 520 aa23.93■■□□□ 1.42
TM6SF1-201ENST00000258909 TRPA1O75762 1119 aa23.92■■□□□ 1.42
TM6SF1-201ENST00000258909 NF2P35240 595 aa23.92■■□□□ 1.42
TM6SF1-201ENST00000258909 ALDH1L2Q3SY69 923 aa23.92■■□□□ 1.42
TM6SF1-201ENST00000258909 CFAP100Q494V2 611 aa23.92■■□□□ 1.42
TM6SF1-201ENST00000258909 FAM84BQ96KN1 310 aaPredicted RBP23.92■■□□□ 1.42
TM6SF1-201ENST00000258909 RNF186Q9NXI6 227 aa23.92■■□□□ 1.42
TM6SF1-201ENST00000258909 HIBADHP31937 336 aaKnown RBP23.91■■□□□ 1.42
TM6SF1-201ENST00000258909 TRMT2AQ8IZ69 625 aaKnown RBP23.91■■□□□ 1.42
TM6SF1-201ENST00000258909 FZD1Q9UP38 647 aa23.91■■□□□ 1.42
TM6SF1-201ENST00000258909 AOX1Q06278 1338 aa23.91■■□□□ 1.42
TM6SF1-201ENST00000258909 MROH5Q6ZUA9 1318 aa23.91■■□□□ 1.42
TM6SF1-201ENST00000258909 CLRN2A0PK11 232 aa23.9■■□□□ 1.42
TM6SF1-201ENST00000258909 TDRD7Q8NHU6 1098 aaKnown RBP23.9■■□□□ 1.42
TM6SF1-201ENST00000258909 PRMT6Q96LA8 375 aaPredicted RBP23.9■■□□□ 1.42
TM6SF1-201ENST00000258909 RBM5P52756 815 aaKnown RBP eCLIP23.89■■□□□ 1.42
TM6SF1-201ENST00000258909 FKBP1AP62942 108 aaKnown RBP23.89■■□□□ 1.42
TM6SF1-201ENST00000258909 MKRN3Q13064 507 aaKnown RBP23.89■■□□□ 1.42
TM6SF1-201ENST00000258909 METTL24Q5JXM2 366 aa23.89■■□□□ 1.42
TM6SF1-201ENST00000258909 MTMR14Q8NCE2 650 aa23.89■■□□□ 1.42
TM6SF1-201ENST00000258909 DEFB129Q9H1M3 183 aa23.89■■□□□ 1.42
TM6SF1-201ENST00000258909 IQSEC3Q9UPP2 1182 aaPredicted RBP23.89■■□□□ 1.42
TM6SF1-201ENST00000258909 ECM29Q5VYK3 1845 aa23.89■■□□□ 1.41
TM6SF1-201ENST00000258909 FAM205AQ6ZU69 1335 aa23.89■■□□□ 1.41
TM6SF1-201ENST00000258909 SPDYE2BA6NHP3 402 aa23.88■■□□□ 1.41
TM6SF1-201ENST00000258909 SPDYE6P0CI01 402 aa23.88■■□□□ 1.41
TM6SF1-201ENST00000258909 MFSD14BQ5SR56 506 aa23.88■■□□□ 1.41
TM6SF1-201ENST00000258909 CCER2I3L3R5 266 aa23.87■■□□□ 1.41
TM6SF1-201ENST00000258909 PTPN12Q05209 780 aaKnown RBP23.87■■□□□ 1.41
TM6SF1-201ENST00000258909 MCOLN1Q9GZU1 580 aa23.87■■□□□ 1.41
TM6SF1-201ENST00000258909 VEZTQ9HBM0 779 aa23.87■■□□□ 1.41
TM6SF1-201ENST00000258909 SAGE1Q9NXZ1 904 aa23.87■■□□□ 1.41
TM6SF1-201ENST00000258909 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.87■■□□□ 1.41
TM6SF1-201ENST00000258909 DGKZQ13574 1117 aa23.87■■□□□ 1.41
TM6SF1-201ENST00000258909 NOB1Q9ULX3 412 aaKnown RBP23.87■■□□□ 1.41
TM6SF1-201ENST00000258909 ANGEL1Q9UNK9 670 aaKnown RBP23.87■■□□□ 1.41
TM6SF1-201ENST00000258909 CCDC85CA6NKD9 419 aa23.86■■□□□ 1.41
TM6SF1-201ENST00000258909 MYO1BO43795 1136 aa23.86■■□□□ 1.41
TM6SF1-201ENST00000258909 ARMC9Q7Z3E5 817 aa23.86■■□□□ 1.41
TM6SF1-201ENST00000258909 VPS37DQ86XT2 251 aa23.86■■□□□ 1.41
TM6SF1-201ENST00000258909 TTF2Q9UNY4 1162 aaKnown RBP23.86■■□□□ 1.41
TM6SF1-201ENST00000258909 PDE8BO95263 885 aa23.85■■□□□ 1.41
TM6SF1-201ENST00000258909 FBXO33Q7Z6M2 555 aa23.85■■□□□ 1.41
TM6SF1-201ENST00000258909 VGLL2Q8N8G2 317 aa23.85■■□□□ 1.41
TM6SF1-201ENST00000258909 CHAF1AQ13111 956 aaPredicted RBP23.84■■□□□ 1.41
TM6SF1-201ENST00000258909 GRIK5Q16478 980 aa23.84■■□□□ 1.41
TM6SF1-201ENST00000258909 REM2Q8IYK8 340 aaPredicted RBP23.83■■□□□ 1.41
TM6SF1-201ENST00000258909 COL1A1P02452 1464 aaPredicted RBP23.83■■□□□ 1.41
TM6SF1-201ENST00000258909 SSC5DA1L4H1 1573 aa23.83■■□□□ 1.4
TM6SF1-201ENST00000258909 FRAT2O75474 233 aaPredicted RBP23.82■■□□□ 1.4
TM6SF1-201ENST00000258909 RFX5P48382 616 aaPredicted RBP23.82■■□□□ 1.4
TM6SF1-201ENST00000258909 BCAMP50895 628 aa23.82■■□□□ 1.4
TM6SF1-201ENST00000258909 CAVIN4Q5BKX8 364 aa23.82■■□□□ 1.4
TM6SF1-201ENST00000258909 ARAP2Q8WZ64 1704 aa23.82■■□□□ 1.4
TM6SF1-201ENST00000258909 LDLRAD1Q5T700 205 aa23.81■■□□□ 1.4
TM6SF1-201ENST00000258909 NBPF12Q5TAG4 269 aaPredicted RBP23.81■■□□□ 1.4
TM6SF1-201ENST00000258909 TDRD3Q9H7E2 651 aaKnown RBP23.81■■□□□ 1.4
TM6SF1-201ENST00000258909 CT47B1P0C2W7 299 aaPredicted RBP23.81■■□□□ 1.4
TM6SF1-201ENST00000258909 UBTFL1P0CB47 393 aaPredicted RBP23.81■■□□□ 1.4
TM6SF1-201ENST00000258909 RASA3Q14644 834 aa23.81■■□□□ 1.4
TM6SF1-201ENST00000258909 SERPINA10Q9UK55 444 aa23.81■■□□□ 1.4
TM6SF1-201ENST00000258909 PPP2R3BQ9Y5P8 575 aa23.81■■□□□ 1.4
TM6SF1-201ENST00000258909 EYA2O00167 538 aa23.8■■□□□ 1.4
TM6SF1-201ENST00000258909 ZNF70Q9UC06 446 aaPredicted RBP23.8■■□□□ 1.4
TM6SF1-201ENST00000258909 TBC1D8O95759 1140 aa23.79■■□□□ 1.4
TM6SF1-201ENST00000258909 CRKP46108 304 aa23.79■■□□□ 1.4
TM6SF1-201ENST00000258909 PUM3Q15397 648 aaKnown RBP23.79■■□□□ 1.4
TM6SF1-201ENST00000258909 SPDYE2Q495Y8 402 aa23.79■■□□□ 1.4
TM6SF1-201ENST00000258909 DZIP1LQ8IYY4 767 aaKnown RBP23.79■■□□□ 1.4
TM6SF1-201ENST00000258909 CLMNQ96JQ2 1002 aa23.79■■□□□ 1.4
TM6SF1-201ENST00000258909 API5Q9BZZ5 524 aaKnown RBP23.79■■□□□ 1.4
TM6SF1-201ENST00000258909 SIL1Q9H173 461 aa23.79■■□□□ 1.4
TM6SF1-201ENST00000258909 PPP1R12BO60237 982 aaPredicted RBP23.78■■□□□ 1.4
TM6SF1-201ENST00000258909 FGFR2P21802 821 aa23.78■■□□□ 1.4
TM6SF1-201ENST00000258909 TM4SF4P48230 202 aa23.78■■□□□ 1.4
TM6SF1-201ENST00000258909 RARSP54136 660 aaKnown RBP23.78■■□□□ 1.4
TM6SF1-201ENST00000258909 SUPT20HL1Q3ZLR7 823 aa23.78■■□□□ 1.4
TM6SF1-201ENST00000258909 SPRYD7Q5W111 196 aa23.78■■□□□ 1.4
TM6SF1-201ENST00000258909 IFIT1P09914 478 aaKnown RBP23.77■■□□□ 1.4
TM6SF1-201ENST00000258909 ATG9AQ7Z3C6 839 aa23.77■■□□□ 1.4
TM6SF1-201ENST00000258909 SLC10A4Q96EP9 437 aa23.77■■□□□ 1.4
TM6SF1-201ENST00000258909 LRRFIP2Q9Y608 721 aaKnown RBP23.77■■□□□ 1.4
TM6SF1-201ENST00000258909 MAP3K11Q16584 847 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms