RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 C1orf115Q9H7X2 142 aa10.62□□□□□ -0.71
TMEM258-201ENST00000257262 CD209Q9NNX6 404 aa10.62□□□□□ -0.71
TMEM258-201ENST00000257262 ADARB2Q9NS39 739 aaKnown RBP10.62□□□□□ -0.71
TMEM258-201ENST00000257262 BMP2KQ9NSY1 1161 aaPredicted RBP10.62□□□□□ -0.71
TMEM258-201ENST00000257262 CNOT7Q9UIV1 285 aaKnown RBP10.62□□□□□ -0.71
TMEM258-201ENST00000257262 PA2G4Q9UQ80 394 aaKnown RBP10.62□□□□□ -0.71
TMEM258-201ENST00000257262 PNMA6EA0A0J9YXQ4 647 aa10.61□□□□□ -0.71
TMEM258-201ENST00000257262 SHTN1A0MZ66 631 aa10.61□□□□□ -0.71
TMEM258-201ENST00000257262 CIAO1O76071 339 aa10.61□□□□□ -0.71
TMEM258-201ENST00000257262 HSPA6P17066 643 aa10.61□□□□□ -0.71
TMEM258-201ENST00000257262 GYG1P46976 350 aa10.61□□□□□ -0.71
TMEM258-201ENST00000257262 RSBN1LQ6PCB5 846 aaPredicted RBP10.61□□□□□ -0.71
TMEM258-201ENST00000257262 USP50Q70EL3 339 aaPredicted RBP10.61□□□□□ -0.71
TMEM258-201ENST00000257262 LDHDQ86WU2 507 aa10.61□□□□□ -0.71
TMEM258-201ENST00000257262 FBXW7Q969H0 707 aa10.61□□□□□ -0.71
TMEM258-201ENST00000257262 COPRSQ9NQ92 184 aa10.61□□□□□ -0.71
TMEM258-201ENST00000257262 COG6Q9Y2V7 657 aa10.61□□□□□ -0.71
TMEM258-201ENST00000257262 H7C1D1 291 aa10.6□□□□□ -0.71
TMEM258-201ENST00000257262 C7P10643 843 aa10.6□□□□□ -0.71
TMEM258-201ENST00000257262 IL1R1P14778 569 aa10.6□□□□□ -0.71
TMEM258-201ENST00000257262 RPS12P25398 132 aaKnown RBP10.6□□□□□ -0.71
TMEM258-201ENST00000257262 ATN1P54259 1190 aaPredicted RBP10.6□□□□□ -0.71
TMEM258-201ENST00000257262 GTF2IP78347 998 aa10.6□□□□□ -0.71
TMEM258-201ENST00000257262 ATP8B2P98198 1209 aa10.6□□□□□ -0.71
TMEM258-201ENST00000257262 MVPQ14764 893 aaKnown RBP10.6□□□□□ -0.71
TMEM258-201ENST00000257262 DACT2Q5SW24 774 aa10.6□□□□□ -0.71
TMEM258-201ENST00000257262 C20orf194Q5TEA3 1177 aa10.6□□□□□ -0.71
TMEM258-201ENST00000257262 STRIP1Q5VSL9 837 aa10.6□□□□□ -0.71
TMEM258-201ENST00000257262 TTLL5Q6EMB2 1281 aa10.6□□□□□ -0.71
TMEM258-201ENST00000257262 ZNF804AQ7Z570 1209 aa10.6□□□□□ -0.71
TMEM258-201ENST00000257262 MICALL2Q8IY33 904 aa10.6□□□□□ -0.71
TMEM258-201ENST00000257262 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.6□□□□□ -0.71
TMEM258-201ENST00000257262 FAM84BQ96KN1 310 aaPredicted RBP10.6□□□□□ -0.71
TMEM258-201ENST00000257262 MXD3Q9BW11 206 aa10.6□□□□□ -0.71
TMEM258-201ENST00000257262 TRPC6Q9Y210 931 aa10.6□□□□□ -0.71
TMEM258-201ENST00000257262 CHRM1P11229 460 aaPredicted RBP10.59□□□□□ -0.71
TMEM258-201ENST00000257262 FGFR2P21802 821 aa10.59□□□□□ -0.71
TMEM258-201ENST00000257262 HIBADHP31937 336 aaKnown RBP10.59□□□□□ -0.71
TMEM258-201ENST00000257262 IL15P40933 162 aaPredicted RBP10.59□□□□□ -0.71
TMEM258-201ENST00000257262 HIRAP54198 1017 aaPredicted RBP10.59□□□□□ -0.71
TMEM258-201ENST00000257262 RBM26Q5T8P6 1007 aaKnown RBP10.59□□□□□ -0.71
TMEM258-201ENST00000257262 MAP1SQ66K74 1059 aaPredicted RBP10.59□□□□□ -0.71
TMEM258-201ENST00000257262 SAMD7Q7Z3H4 446 aa10.59□□□□□ -0.71
TMEM258-201ENST00000257262 AGBL3Q8NEM8 1001 aa10.59□□□□□ -0.71
TMEM258-201ENST00000257262 GMLQ99445 158 aa10.59□□□□□ -0.71
TMEM258-201ENST00000257262 CEP126Q9P2H0 1117 aa10.59□□□□□ -0.71
TMEM258-201ENST00000257262 TTLL13PA6NNM8 815 aa10.58□□□□□ -0.72
TMEM258-201ENST00000257262 SASH1O94885 1247 aa10.58□□□□□ -0.72
TMEM258-201ENST00000257262 ITGBL1O95965 494 aaPredicted RBP10.58□□□□□ -0.72
TMEM258-201ENST00000257262 EGFRP00533 1210 aa10.58□□□□□ -0.72
TMEM258-201ENST00000257262 PDE3AQ14432 1141 aa10.58□□□□□ -0.72
TMEM258-201ENST00000257262 PUM3Q15397 648 aaKnown RBP10.58□□□□□ -0.72
TMEM258-201ENST00000257262 TBC1D10BQ4KMP7 808 aaPredicted RBP10.58□□□□□ -0.72
TMEM258-201ENST00000257262 CAVIN4Q5BKX8 364 aa10.58□□□□□ -0.72
TMEM258-201ENST00000257262 FBXO33Q7Z6M2 555 aa10.58□□□□□ -0.72
TMEM258-201ENST00000257262 CNTROBQ8N137 903 aa10.58□□□□□ -0.72
TMEM258-201ENST00000257262 TDRD7Q8NHU6 1098 aaKnown RBP10.58□□□□□ -0.72
TMEM258-201ENST00000257262 TRPM4Q8TD43 1214 aa10.58□□□□□ -0.72
TMEM258-201ENST00000257262 SSH3Q8TE77 659 aa10.58□□□□□ -0.72
TMEM258-201ENST00000257262 METRNQ9UJH8 293 aa10.58□□□□□ -0.72
TMEM258-201ENST00000257262 CIZ1Q9ULV3 898 aaPredicted RBP10.58□□□□□ -0.72
TMEM258-201ENST00000257262 DDX19BQ9UMR2 479 aa10.58□□□□□ -0.72
TMEM258-201ENST00000257262 ZNF609O15014 1411 aa10.58□□□□□ -0.72
TMEM258-201ENST00000257262 IFIT1P09914 478 aaKnown RBP10.57□□□□□ -0.72
TMEM258-201ENST00000257262 USP17L8P0C7I0 530 aa10.57□□□□□ -0.72
TMEM258-201ENST00000257262 BCAMP50895 628 aa10.57□□□□□ -0.72
TMEM258-201ENST00000257262 TIMM10P62072 90 aa10.57□□□□□ -0.72
TMEM258-201ENST00000257262 TFCP2Q12800 502 aa10.57□□□□□ -0.72
TMEM258-201ENST00000257262 ATP2B3Q16720 1220 aa10.57□□□□□ -0.72
TMEM258-201ENST00000257262 CEP85Q6P2H3 762 aa10.57□□□□□ -0.72
TMEM258-201ENST00000257262 ZNF467Q7Z7K2 595 aaPredicted RBP10.57□□□□□ -0.72
TMEM258-201ENST00000257262 VPS37DQ86XT2 251 aa10.57□□□□□ -0.72
TMEM258-201ENST00000257262 LPIN2Q92539 896 aa10.57□□□□□ -0.72
TMEM258-201ENST00000257262 PGAP2Q9UHJ9 254 aa10.57□□□□□ -0.72
TMEM258-201ENST00000257262 IQSEC3Q9UPP2 1182 aaPredicted RBP10.57□□□□□ -0.72
TMEM258-201ENST00000257262 JAG2Q9Y219 1238 aa10.57□□□□□ -0.72
TMEM258-201ENST00000257262 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.57□□□□□ -0.72
TMEM258-201ENST00000257262 MYO3BQ8WXR4 1341 aa10.57□□□□□ -0.72
TMEM258-201ENST00000257262 SLC5A1P13866 664 aa10.56□□□□□ -0.72
TMEM258-201ENST00000257262 APLP1P51693 650 aa10.56□□□□□ -0.72
TMEM258-201ENST00000257262 ZNF280AP59817 542 aaPredicted RBP10.56□□□□□ -0.72
TMEM258-201ENST00000257262 G3BP1Q13283 466 aaKnown RBP eCLIP10.56□□□□□ -0.72
TMEM258-201ENST00000257262 CERS5Q8N5B7 392 aa10.56□□□□□ -0.72
TMEM258-201ENST00000257262 ZC3H15Q8WU90 426 aaKnown RBP10.56□□□□□ -0.72
TMEM258-201ENST00000257262 MYOZ2Q9NPC6 264 aa10.56□□□□□ -0.72
TMEM258-201ENST00000257262 ZBTB40Q9NUA8 1239 aa10.56□□□□□ -0.72
TMEM258-201ENST00000257262 FAM205AQ6ZU69 1335 aa10.56□□□□□ -0.72
TMEM258-201ENST00000257262 PASKQ96RG2 1323 aa10.56□□□□□ -0.72
TMEM258-201ENST00000257262 ARAP2Q8WZ64 1704 aa10.55□□□□□ -0.72
TMEM258-201ENST00000257262 MYH13Q9UKX3 1938 aa10.55□□□□□ -0.72
TMEM258-201ENST00000257262 FRAT2O75474 233 aaPredicted RBP10.55□□□□□ -0.72
TMEM258-201ENST00000257262 SURF6O75683 361 aaKnown RBP10.55□□□□□ -0.72
TMEM258-201ENST00000257262 FKBP1AP62942 108 aaKnown RBP10.55□□□□□ -0.72
TMEM258-201ENST00000257262 HTRA3P83110 453 aa10.55□□□□□ -0.72
TMEM258-201ENST00000257262 FMR1Q06787 632 aaKnown RBP eCLIP10.55□□□□□ -0.727e-9■■■□□ 17.5
TMEM258-201ENST00000257262 KIF4BQ2VIQ3 1234 aa10.55□□□□□ -0.72
TMEM258-201ENST00000257262 KIAA0825Q8IV33 1275 aa10.55□□□□□ -0.72
TMEM258-201ENST00000257262 OGFOD1Q8N543 542 aa10.55□□□□□ -0.72
TMEM258-201ENST00000257262 CHMP4BQ9H444 224 aaKnown RBP10.55□□□□□ -0.72
TMEM258-201ENST00000257262 AKAP2Q9Y2D5 859 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms