RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 KIF5CO60282 957 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 TAF5LO75529 589 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 SYKP43405 635 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 FAM193AP78312 1265 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 FAM160A1Q05DH4 1040 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 GCKRQ14397 625 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 CCDC96Q2M329 555 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 CACTINQ8WUQ7 758 aaKnown RBP10.64□□□□□ -0.71
COL21A1-201ENST00000244728 TET3O43151 1660 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 ABCA6Q8N139 1617 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 ZBTB43O43298 467 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 TOM1O60784 492 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 CT47A1Q5JQC4 288 aaPredicted RBP10.64□□□□□ -0.71
COL21A1-201ENST00000244728 KCNG4Q8TDN1 519 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 ZSWIM6Q9HCJ5 1215 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.63□□□□□ -0.71
COL21A1-201ENST00000244728 H0YHG0 523 aa10.63□□□□□ -0.71
COL21A1-201ENST00000244728 SPTLC2O15270 562 aa10.63□□□□□ -0.71
COL21A1-201ENST00000244728 ZNF76P36508 570 aa10.63□□□□□ -0.71
COL21A1-201ENST00000244728 MCM6Q14566 821 aa10.63□□□□□ -0.71
COL21A1-201ENST00000244728 TTLL7Q6ZT98 887 aa10.63□□□□□ -0.71
COL21A1-201ENST00000244728 ALG1Q9BT22 464 aa10.63□□□□□ -0.71
COL21A1-201ENST00000244728 UTP14AQ9BVJ6 771 aaKnown RBP10.63□□□□□ -0.71
COL21A1-201ENST00000244728 NCOA5Q9HCD5 579 aaKnown RBP10.63□□□□□ -0.71
COL21A1-201ENST00000244728 UQCRFS1P1P0C7P4 283 aa10.63□□□□□ -0.71
COL21A1-201ENST00000244728 STIM1Q13586 685 aa10.63□□□□□ -0.71
COL21A1-201ENST00000244728 WTAPQ15007 396 aa10.63□□□□□ -0.71
COL21A1-201ENST00000244728 MAGEB6Q8N7X4 407 aa10.63□□□□□ -0.71
COL21A1-201ENST00000244728 CFAP74Q9C0B2 1584 aa10.63□□□□□ -0.71
COL21A1-201ENST00000244728 CCDC194A0A1B0GVG4 234 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 EYA2O00167 538 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 ENOX2Q16206 610 aaKnown RBP10.62□□□□□ -0.71
COL21A1-201ENST00000244728 ERCC6LQ2NKX8 1250 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 TNNI3KQ59H18 835 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 TXLNBQ8N3L3 684 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 TMEM87AQ8NBN3 555 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 FPGT-TNNI3KV9GXZ4 949 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 IQGAP1P46940 1657 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 LRRC8AQ8IWT6 810 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 PLBD2Q8NHP8 589 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 ITGA6P23229 1130 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 OTUD7BQ6GQQ9 843 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 NAA16Q6N069 864 aaPredicted RBP10.62□□□□□ -0.71
COL21A1-201ENST00000244728 DHX32Q7L7V1 743 aaKnown RBP10.62□□□□□ -0.71
COL21A1-201ENST00000244728 SEC63Q9UGP8 760 aaKnown RBP10.62□□□□□ -0.71
COL21A1-201ENST00000244728 SETD1BQ9UPS6 1966 aaKnown RBP10.62□□□□□ -0.71
COL21A1-201ENST00000244728 GOLGA6L9A6NEM1 432 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 VGLL3A8MV65 326 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 RNF113AO15541 343 aaKnown RBP10.62□□□□□ -0.71
COL21A1-201ENST00000244728 ZFYP08048 801 aaPredicted RBP10.62□□□□□ -0.71
COL21A1-201ENST00000244728 CCDC102BQ68D86 513 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 EAF2Q96CJ1 260 aaPredicted RBP10.62□□□□□ -0.71
COL21A1-201ENST00000244728 DEF6Q9H4E7 631 aa10.62□□□□□ -0.71
COL21A1-201ENST00000244728 MED14O60244 1454 aa10.61□□□□□ -0.71
COL21A1-201ENST00000244728 EIF5P55010 431 aaKnown RBP10.61□□□□□ -0.71
COL21A1-201ENST00000244728 NAA30Q147X3 362 aaPredicted RBP10.61□□□□□ -0.71
COL21A1-201ENST00000244728 SRRTQ9BXP5 876 aaKnown RBP10.61□□□□□ -0.71
COL21A1-201ENST00000244728 ZNHIT6Q9NWK9 470 aaKnown RBP10.61□□□□□ -0.71
COL21A1-201ENST00000244728 PCDH11XQ9BZA7 1347 aa10.61□□□□□ -0.71
COL21A1-201ENST00000244728 PCDH11YQ9BZA8 1340 aa10.61□□□□□ -0.71
COL21A1-201ENST00000244728 ZFYVE16Q7Z3T8 1539 aa10.61□□□□□ -0.71
COL21A1-201ENST00000244728 A0A087WWV3 80 aa10.61□□□□□ -0.71
COL21A1-201ENST00000244728 IDEP14735 1019 aa10.61□□□□□ -0.71
COL21A1-201ENST00000244728 EVCP57679 992 aa10.61□□□□□ -0.71
COL21A1-201ENST00000244728 GBP3Q9H0R5 595 aa10.61□□□□□ -0.71
COL21A1-201ENST00000244728 SPTLC3Q9NUV7 552 aa10.61□□□□□ -0.71
COL21A1-201ENST00000244728 TMOD2Q9NZR1 351 aa10.61□□□□□ -0.71
COL21A1-201ENST00000244728 NEO1Q92859 1461 aa10.61□□□□□ -0.71
COL21A1-201ENST00000244728 A0A0D9SFI3 127 aa10.61□□□□□ -0.71
COL21A1-201ENST00000244728 PRDM1O75626 825 aa10.61□□□□□ -0.71
COL21A1-201ENST00000244728 NCBP1Q09161 790 aaKnown RBP10.61□□□□□ -0.71
COL21A1-201ENST00000244728 TDRD7Q8NHU6 1098 aaKnown RBP10.61□□□□□ -0.71
COL21A1-201ENST00000244728 SEC62Q99442 399 aaKnown RBP10.61□□□□□ -0.71
COL21A1-201ENST00000244728 CARD6Q9BX69 1037 aa10.61□□□□□ -0.71
COL21A1-201ENST00000244728 FAM98CQ17RN3 349 aaKnown RBP10.6□□□□□ -0.71
COL21A1-201ENST00000244728 BMP2KQ9NSY1 1161 aaPredicted RBP10.6□□□□□ -0.71
COL21A1-201ENST00000244728 LRRC7Q96NW7 1537 aa10.6□□□□□ -0.71
COL21A1-201ENST00000244728 GNPATO15228 680 aa10.6□□□□□ -0.71
COL21A1-201ENST00000244728 TUBB4AP04350 444 aa10.6□□□□□ -0.71
COL21A1-201ENST00000244728 AFMP43652 599 aa10.6□□□□□ -0.71
COL21A1-201ENST00000244728 PICALMQ13492 652 aa10.6□□□□□ -0.71
COL21A1-201ENST00000244728 KARSQ15046 597 aaKnown RBP10.6□□□□□ -0.71
COL21A1-201ENST00000244728 CEP131Q9UPN4 1083 aa10.6□□□□□ -0.71
COL21A1-201ENST00000244728 ZNF287Q9HBT7 754 aa10.6□□□□□ -0.71
COL21A1-201ENST00000244728 RNF216Q9NWF9 866 aaPredicted RBP10.6□□□□□ -0.71
COL21A1-201ENST00000244728 PDE4BQ07343 736 aa10.6□□□□□ -0.71
COL21A1-201ENST00000244728 TMEM132AQ24JP5 1023 aa10.6□□□□□ -0.71
COL21A1-201ENST00000244728 CCDC191Q8NCU4 936 aa10.6□□□□□ -0.71
COL21A1-201ENST00000244728 XAGE2Q96GT9 111 aa10.6□□□□□ -0.71
COL21A1-201ENST00000244728 XPO4Q9C0E2 1151 aaKnown RBP10.6□□□□□ -0.71
COL21A1-201ENST00000244728 KAT14Q9H8E8 782 aa10.6□□□□□ -0.71
COL21A1-201ENST00000244728 NEURL1BA8MQ27 555 aa10.59□□□□□ -0.71
COL21A1-201ENST00000244728 B4E1Z4 1266 aa10.59□□□□□ -0.71
COL21A1-201ENST00000244728 RIMBP2O15034 1052 aa10.59□□□□□ -0.71
COL21A1-201ENST00000244728 TPTE2Q6XPS3 522 aa10.59□□□□□ -0.71
COL21A1-201ENST00000244728 QRICH2Q9H0J4 1663 aa10.59□□□□□ -0.71
COL21A1-201ENST00000244728 MBD4O95243 580 aa10.59□□□□□ -0.71
COL21A1-201ENST00000244728 BAG3O95817 575 aa10.59□□□□□ -0.71
COL21A1-201ENST00000244728 KCNQ4P56696 695 aa10.59□□□□□ -0.71
COL21A1-201ENST00000244728 MRFAP1L1Q96HT8 127 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms