RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 HDGFL1Q5TGJ6 251 aa10.82□□□□□ -0.68
IFT43-201ENST00000238628 TDHQ8IZJ6 230 aa10.82□□□□□ -0.68
IFT43-201ENST00000238628 RAET1EQ8TD07 263 aa10.82□□□□□ -0.68
IFT43-201ENST00000238628 U2AF1L4Q8WU68 220 aaKnown RBP10.82□□□□□ -0.68
IFT43-201ENST00000238628 FAM161BQ96MY7 647 aa10.82□□□□□ -0.68
IFT43-201ENST00000238628 GUCD1Q96NT3 240 aa10.82□□□□□ -0.68
IFT43-201ENST00000238628 ANKIB1Q9P2G1 1089 aa10.82□□□□□ -0.68
IFT43-201ENST00000238628 DBF4Q9UBU7 674 aaPredicted RBP10.82□□□□□ -0.68
IFT43-201ENST00000238628 TTC28Q96AY4 2481 aa10.82□□□□□ -0.68
IFT43-201ENST00000238628 ZNF646O15015 1829 aaPredicted RBP10.81□□□□□ -0.68
IFT43-201ENST00000238628 TMEM265A0A087WTH1 108 aa10.81□□□□□ -0.68
IFT43-201ENST00000238628 UBXN2AP68543 259 aa10.81□□□□□ -0.68
IFT43-201ENST00000238628 TRIM47Q96LD4 638 aa10.81□□□□□ -0.68
IFT43-201ENST00000238628 DEFB129Q9H1M3 183 aa10.81□□□□□ -0.68
IFT43-201ENST00000238628 GGA1Q9UJY5 639 aa10.81□□□□□ -0.68
IFT43-201ENST00000238628 ZMYND8Q9ULU4 1186 aaPredicted RBP10.81□□□□□ -0.68
IFT43-201ENST00000238628 TNFRSF10AO00220 468 aa10.8□□□□□ -0.68
IFT43-201ENST00000238628 SGPL1O95470 568 aa10.8□□□□□ -0.68
IFT43-201ENST00000238628 TFRCP02786 760 aaKnown RBP10.8□□□□□ -0.68
IFT43-201ENST00000238628 HOXD10P28358 340 aa10.8□□□□□ -0.68
IFT43-201ENST00000238628 IREB2P48200 963 aaKnown RBP10.8□□□□□ -0.68
IFT43-201ENST00000238628 PODNQ7Z5L7 613 aa10.8□□□□□ -0.68
IFT43-201ENST00000238628 C7orf61Q8IZ16 206 aa10.8□□□□□ -0.68
IFT43-201ENST00000238628 FBXW7Q969H0 707 aa10.8□□□□□ -0.68
IFT43-201ENST00000238628 SEC31BQ9NQW1 1179 aa10.8□□□□□ -0.68
IFT43-201ENST00000238628 HYPKQ9NX55 129 aa10.8□□□□□ -0.68
IFT43-201ENST00000238628 PODXL2Q9NZ53 605 aa10.8□□□□□ -0.68
IFT43-201ENST00000238628 RIPOR2Q9Y4F9 1068 aa10.8□□□□□ -0.68
IFT43-201ENST00000238628 VCANP13611 3396 aa10.8□□□□□ -0.68
IFT43-201ENST00000238628 TLR2O60603 784 aa10.79□□□□□ -0.68
IFT43-201ENST00000238628 HOXB7P09629 217 aa10.79□□□□□ -0.68
IFT43-201ENST00000238628 HSP90B1P14625 803 aaKnown RBP10.79□□□□□ -0.68
IFT43-201ENST00000238628 TRIM28Q13263 835 aaKnown RBP10.79□□□□□ -0.68
IFT43-201ENST00000238628 SUPT20HL1Q3ZLR7 823 aa10.79□□□□□ -0.68
IFT43-201ENST00000238628 RIC3Q7Z5B4 369 aa10.79□□□□□ -0.68
IFT43-201ENST00000238628 CCDC146Q8IYE0 955 aa10.79□□□□□ -0.68
IFT43-201ENST00000238628 ANKRD13AQ8IZ07 590 aa10.79□□□□□ -0.68
IFT43-201ENST00000238628 BRI3BPQ8WY22 251 aa10.79□□□□□ -0.68
IFT43-201ENST00000238628 OPTNQ96CV9 577 aa10.79□□□□□ -0.68
IFT43-201ENST00000238628 MS4A4AQ96JQ5 239 aa10.79□□□□□ -0.68
IFT43-201ENST00000238628 MXD3Q9BW11 206 aa10.79□□□□□ -0.68
IFT43-201ENST00000238628 UBE2OQ9C0C9 1292 aaKnown RBP10.79□□□□□ -0.68
IFT43-201ENST00000238628 ELP3Q9H9T3 547 aa10.79□□□□□ -0.68
IFT43-201ENST00000238628 SRRDQ9UH36 339 aa10.79□□□□□ -0.68
IFT43-201ENST00000238628 COL4A1P02462 1669 aa10.79□□□□□ -0.68
IFT43-201ENST00000238628 CCL15-CCL14A0A0B4J2E2 113 aa10.78□□□□□ -0.68
IFT43-201ENST00000238628 SYN1P17600 705 aa10.78□□□□□ -0.68
IFT43-201ENST00000238628 MAGEA10P43363 369 aaPredicted RBP10.78□□□□□ -0.68
IFT43-201ENST00000238628 RALBP1Q15311 655 aa10.78□□□□□ -0.68
IFT43-201ENST00000238628 CCL15Q16663 113 aa10.78□□□□□ -0.68
IFT43-201ENST00000238628 FAM109BQ6ICB4 259 aaPredicted RBP10.78□□□□□ -0.68
IFT43-201ENST00000238628 FAM43AQ8N2R8 423 aa10.78□□□□□ -0.68
IFT43-201ENST00000238628 ZBTB38Q8NAP3 1195 aaPredicted RBP10.78□□□□□ -0.68
IFT43-201ENST00000238628 MAFAQ8NHW3 353 aaPredicted RBP10.78□□□□□ -0.68
IFT43-201ENST00000238628 TRIM35Q9UPQ4 493 aa10.78□□□□□ -0.68
IFT43-201ENST00000238628 LAMB1P07942 1786 aa10.77□□□□□ -0.68
IFT43-201ENST00000238628 PSME4Q14997 1843 aa10.77□□□□□ -0.68
IFT43-201ENST00000238628 POTEB2H3BUK9 544 aa10.77□□□□□ -0.69
IFT43-201ENST00000238628 USP2O75604 605 aaPredicted RBP10.77□□□□□ -0.69
IFT43-201ENST00000238628 FMNL1O95466 1100 aaPredicted RBP10.77□□□□□ -0.69
IFT43-201ENST00000238628 PSMC4P43686 418 aa10.77□□□□□ -0.69
IFT43-201ENST00000238628 GTF2A2P52657 109 aa10.77□□□□□ -0.69
IFT43-201ENST00000238628 CCDC152Q4G0S7 254 aa10.77□□□□□ -0.69
IFT43-201ENST00000238628 DUSP27Q5VZP5 1158 aa10.77□□□□□ -0.69
IFT43-201ENST00000238628 RUNDC1Q96C34 613 aa10.77□□□□□ -0.69
IFT43-201ENST00000238628 PAWRQ96IZ0 340 aaKnown RBP10.77□□□□□ -0.69
IFT43-201ENST00000238628 CCDC85AQ96PX6 553 aaPredicted RBP10.77□□□□□ -0.69
IFT43-201ENST00000238628 UNC93B1Q9H1C4 597 aa10.77□□□□□ -0.69
IFT43-201ENST00000238628 MYO3BQ8WXR4 1341 aa10.77□□□□□ -0.69
IFT43-201ENST00000238628 ZSWIM8A7E2V4 1837 aa10.77□□□□□ -0.69
IFT43-201ENST00000238628 COL1A1P02452 1464 aaPredicted RBP10.76□□□□□ -0.69
IFT43-201ENST00000238628 PDE8AO60658 829 aa10.76□□□□□ -0.69
IFT43-201ENST00000238628 OSBPP22059 807 aa10.76□□□□□ -0.69
IFT43-201ENST00000238628 ATP2B4P23634 1241 aa10.76□□□□□ -0.69
IFT43-201ENST00000238628 MMP14P50281 582 aa10.76□□□□□ -0.69
IFT43-201ENST00000238628 GOLGA2Q08379 1002 aa10.76□□□□□ -0.69
IFT43-201ENST00000238628 MAP3K12Q12852 859 aa10.76□□□□□ -0.69
IFT43-201ENST00000238628 DACT2Q5SW24 774 aa10.76□□□□□ -0.69
IFT43-201ENST00000238628 JARID2Q92833 1246 aaPredicted RBP10.76□□□□□ -0.69
IFT43-201ENST00000238628 MYD88Q99836 296 aa10.76□□□□□ -0.69
IFT43-201ENST00000238628 PHAXQ9H814 394 aaKnown RBP10.76□□□□□ -0.69
IFT43-201ENST00000238628 PPP2R3BQ9Y5P8 575 aa10.76□□□□□ -0.69
IFT43-201ENST00000238628 MYPNQ86TC9 1320 aa10.76□□□□□ -0.69
IFT43-201ENST00000238628 PCCAP05165 728 aaPredicted RBP10.75□□□□□ -0.69
IFT43-201ENST00000238628 CAPN2P17655 700 aa10.75□□□□□ -0.69
IFT43-201ENST00000238628 NBPF12Q5TAG4 269 aaPredicted RBP10.75□□□□□ -0.69
IFT43-201ENST00000238628 ZNF697Q5TEC3 545 aa10.75□□□□□ -0.69
IFT43-201ENST00000238628 NECAB2Q7Z6G3 386 aa10.75□□□□□ -0.69
IFT43-201ENST00000238628 KIAA0825Q8IV33 1275 aa10.75□□□□□ -0.69
IFT43-201ENST00000238628 ANKRD18AQ8IVF6 992 aa10.75□□□□□ -0.69
IFT43-201ENST00000238628 CCDC191Q8NCU4 936 aa10.75□□□□□ -0.69
IFT43-201ENST00000238628 HELBQ8NG08 1087 aaPredicted RBP10.75□□□□□ -0.69
IFT43-201ENST00000238628 XDHP47989 1333 aa10.75□□□□□ -0.69
IFT43-201ENST00000238628 SSC5DA1L4H1 1573 aa10.74□□□□□ -0.69
IFT43-201ENST00000238628 ELL2O00472 640 aaPredicted RBP10.74□□□□□ -0.69
IFT43-201ENST00000238628 CTGFP29279 349 aa10.74□□□□□ -0.69
IFT43-201ENST00000238628 DLGAP5Q15398 846 aa10.74□□□□□ -0.69
IFT43-201ENST00000238628 STRIP1Q5VSL9 837 aa10.74□□□□□ -0.69
IFT43-201ENST00000238628 DEFB118Q96PH6 123 aa10.74□□□□□ -0.69
IFT43-201ENST00000238628 CDX2Q99626 313 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms