RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 RUFY2Q8WXA3 655 aa12.2□□□□□ -0.46
PRAMEF4-201ENST00000235349 PODXL2Q9NZ53 605 aa12.2□□□□□ -0.46
PRAMEF4-201ENST00000235349 GGA1Q9UJY5 639 aa12.2□□□□□ -0.46
PRAMEF4-201ENST00000235349 LRRC37AA6NMS7 1700 aa12.2□□□□□ -0.46
PRAMEF4-201ENST00000235349 KCNA3P22001 575 aa12.19□□□□□ -0.46
PRAMEF4-201ENST00000235349 ATP2B4P23634 1241 aa12.19□□□□□ -0.46
PRAMEF4-201ENST00000235349 ZMYM1Q5SVZ6 1142 aa12.19□□□□□ -0.46
PRAMEF4-201ENST00000235349 MTFR1LQ9H019 292 aa12.19□□□□□ -0.46
PRAMEF4-201ENST00000235349 COL1A1P02452 1464 aaPredicted RBP12.19□□□□□ -0.46
PRAMEF4-201ENST00000235349 LTBP1Q14766 1721 aa12.19□□□□□ -0.46
PRAMEF4-201ENST00000235349 FSD2A1L4K1 749 aa12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 C6orf229H3BNL8 230 aa12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 DPEP1P16444 411 aa12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 PRPF40BQ6NWY9 871 aaKnown RBP12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 TMC4Q7Z404 712 aa12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 OSBP2Q969R2 916 aa12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 GNL3LQ9NVN8 582 aaKnown RBP12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 WWC3Q9ULE0 1092 aa12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 JAG2Q9Y219 1238 aa12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 C10orf71Q711Q0 1435 aa12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 DOCK2Q92608 1830 aa12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 GOLGA6L3A6NEY3 463 aa12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 IDH1O75874 414 aaKnown RBP12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 PTMSP20962 102 aa12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 MCMDC2Q4G0Z9 681 aa12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 MPNDQ8N594 471 aa12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 C7orf43Q8WVR3 580 aa12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 PALD1Q9ULE6 856 aa12.18□□□□□ -0.46
PRAMEF4-201ENST00000235349 KIF13BQ9NQT8 1826 aa12.17□□□□□ -0.46
PRAMEF4-201ENST00000235349 M0R2C6 588 aa12.17□□□□□ -0.46
PRAMEF4-201ENST00000235349 RIMBP2O15034 1052 aa12.17□□□□□ -0.46
PRAMEF4-201ENST00000235349 TTF1Q15361 905 aaPredicted RBP12.17□□□□□ -0.46
PRAMEF4-201ENST00000235349 SLC9C2Q5TAH2 1124 aa12.17□□□□□ -0.46
PRAMEF4-201ENST00000235349 KIAA1211Q6ZU35 1233 aa12.17□□□□□ -0.46
PRAMEF4-201ENST00000235349 C15orf52Q6ZUT6 534 aaKnown RBP12.17□□□□□ -0.46
PRAMEF4-201ENST00000235349 SGIP1Q9BQI5 828 aa12.17□□□□□ -0.46
PRAMEF4-201ENST00000235349 SRCAPQ6ZRS2 3230 aa12.17□□□□□ -0.46
PRAMEF4-201ENST00000235349 RFX7Q2KHR2 1363 aa12.17□□□□□ -0.46
PRAMEF4-201ENST00000235349 MED23Q9ULK4 1368 aa12.17□□□□□ -0.46
PRAMEF4-201ENST00000235349 ADD2P35612 726 aa12.16□□□□□ -0.46
PRAMEF4-201ENST00000235349 CHAF1AQ13111 956 aaPredicted RBP12.16□□□□□ -0.46
PRAMEF4-201ENST00000235349 WASHC4Q2M389 1173 aa12.16□□□□□ -0.46
PRAMEF4-201ENST00000235349 CNKSR1Q969H4 720 aa12.16□□□□□ -0.46
PRAMEF4-201ENST00000235349 PUS7LQ9H0K6 701 aaKnown RBP12.16□□□□□ -0.46
PRAMEF4-201ENST00000235349 HELLSQ9NRZ9 838 aa12.16□□□□□ -0.46
PRAMEF4-201ENST00000235349 CHMP5Q9NZZ3 219 aa12.16□□□□□ -0.46
PRAMEF4-201ENST00000235349 DENND2AQ9ULE3 1009 aa12.16□□□□□ -0.46
PRAMEF4-201ENST00000235349 TCRBV5S4A2TA0A5A2 114 aa12.16□□□□□ -0.46
PRAMEF4-201ENST00000235349 PDE6AP16499 860 aa12.16□□□□□ -0.46
PRAMEF4-201ENST00000235349 POLD1P28340 1107 aa12.16□□□□□ -0.46
PRAMEF4-201ENST00000235349 VPS53Q5VIR6 699 aa12.16□□□□□ -0.46
PRAMEF4-201ENST00000235349 DPP8Q6V1X1 898 aaPredicted RBP12.16□□□□□ -0.46
PRAMEF4-201ENST00000235349 TDRD7Q8NHU6 1098 aaKnown RBP12.16□□□□□ -0.46
PRAMEF4-201ENST00000235349 ABCF2Q9UG63 623 aa12.16□□□□□ -0.46
PRAMEF4-201ENST00000235349 CCDC171Q6TFL3 1326 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 ZNF532Q9HCE3 1301 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 DLEC1Q9Y238 1755 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 DUOX1Q9NRD9 1551 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 C21orf2O43822 256 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 MCM4P33991 863 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 PTGER2P43116 358 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 MRE11P49959 708 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 TICAM2Q86XR7 235 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 MAGEB6Q8N7X4 407 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 MAP4K1Q92918 833 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 CD209Q9NNX6 404 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 LRP2BPQ9P2M1 347 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 PPP1R1BQ9UD71 204 aaPredicted RBP12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 MAST3O60307 1309 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 RAD50Q92878 1312 aa12.15□□□□□ -0.46
PRAMEF4-201ENST00000235349 KIAA1551Q9HCM1 1747 aa12.15□□□□□ -0.47
PRAMEF4-201ENST00000235349 DDX11L8A8MPP1 907 aa12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 ZFYP08048 801 aaPredicted RBP12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 HSPA4P34932 840 aa12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 DOK7Q18PE1 504 aa12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 ZNF804AQ7Z570 1209 aa12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 TTLL6Q8N841 843 aa12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 ZNF384Q8TF68 577 aa12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 TBC1D2Q9BYX2 928 aa12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 RBM8AQ9Y5S9 174 aaKnown RBP12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 SEMA3EO15041 775 aa12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 MAP3K12Q12852 859 aa12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 NECTIN1Q15223 517 aa12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 UBE3CQ15386 1083 aa12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 GRIK5Q16478 980 aa12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 APPBP2Q92624 585 aa12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 RAI14Q9P0K7 980 aa12.14□□□□□ -0.47
PRAMEF4-201ENST00000235349 CCDC88AQ3V6T2 1871 aa12.13□□□□□ -0.47
PRAMEF4-201ENST00000235349 FOXP2O15409 715 aa12.13□□□□□ -0.47
PRAMEF4-201ENST00000235349 IL1R1P14778 569 aa12.13□□□□□ -0.47
PRAMEF4-201ENST00000235349 LRRFIP1Q32MZ4 808 aaKnown RBP12.13□□□□□ -0.47
PRAMEF4-201ENST00000235349 ZSCAN25Q6NSZ9 544 aa12.13□□□□□ -0.47
PRAMEF4-201ENST00000235349 ADGRA1Q86SQ6 560 aa12.13□□□□□ -0.47
PRAMEF4-201ENST00000235349 KLHL34Q8N239 644 aa12.13□□□□□ -0.47
PRAMEF4-201ENST00000235349 TMX4Q9H1E5 349 aaPredicted RBP12.13□□□□□ -0.47
PRAMEF4-201ENST00000235349 SLKQ9H2G2 1235 aaPredicted RBP12.13□□□□□ -0.47
PRAMEF4-201ENST00000235349 SNX14Q9Y5W7 946 aa12.13□□□□□ -0.47
PRAMEF4-201ENST00000235349 TAF6LQ9Y6J9 622 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms