RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 KIF6Q6ZMV9 814 aa11.64□□□□□ -0.55
MDH1-201ENST00000233114 LEO1Q8WVC0 666 aaPredicted RBP11.64□□□□□ -0.55
MDH1-201ENST00000233114 ZNF274Q96GC6 653 aaPredicted RBP11.64□□□□□ -0.55
MDH1-201ENST00000233114 NEUROD6Q96NK8 337 aa11.64□□□□□ -0.55
MDH1-201ENST00000233114 ZBTB3Q9H5J0 574 aa11.64□□□□□ -0.55
MDH1-201ENST00000233114 TMOD3Q9NYL9 352 aa11.64□□□□□ -0.55
MDH1-201ENST00000233114 SLAIN2Q9P270 581 aa11.64□□□□□ -0.55
MDH1-201ENST00000233114 USP25Q9UHP3 1055 aa11.64□□□□□ -0.55
MDH1-201ENST00000233114 ANKRD36CQ5JPF3 1778 aa11.64□□□□□ -0.55
MDH1-201ENST00000233114 PLCH1Q4KWH8 1693 aa11.63□□□□□ -0.55
MDH1-201ENST00000233114 MAST3O60307 1309 aa11.63□□□□□ -0.55
MDH1-201ENST00000233114 WDR19Q8NEZ3 1342 aa11.63□□□□□ -0.55
MDH1-201ENST00000233114 CSF1RP07333 972 aa11.63□□□□□ -0.55
MDH1-201ENST00000233114 HSPD1P10809 573 aaKnown RBP11.63□□□□□ -0.55
MDH1-201ENST00000233114 HCLS1P14317 486 aaPredicted RBP11.63□□□□□ -0.55
MDH1-201ENST00000233114 EVCP57679 992 aa11.63□□□□□ -0.55
MDH1-201ENST00000233114 CCDC129Q6ZRS4 1044 aa11.63□□□□□ -0.55
MDH1-201ENST00000233114 TCEANC2Q96MN5 208 aa11.63□□□□□ -0.55
MDH1-201ENST00000233114 CLSTN2Q9H4D0 955 aa11.63□□□□□ -0.55
MDH1-201ENST00000233114 STRCQ7RTU9 1775 aa11.63□□□□□ -0.55
MDH1-201ENST00000233114 H3BQV1 296 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 ADCY5O95622 1261 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 STARD3NLO95772 234 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 FGD1P98174 961 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 COL9A3Q14050 684 aaPredicted RBP11.62□□□□□ -0.55
MDH1-201ENST00000233114 LRRC24Q50LG9 513 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 TAF7LQ5H9L4 462 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 IFFO2Q5TF58 517 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 GIMAP6Q6P9H5 292 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 STOX1Q6ZVD7 989 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 ZBTB38Q8NAP3 1195 aaPredicted RBP11.62□□□□□ -0.55
MDH1-201ENST00000233114 FAM200AQ8TCP9 573 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 BRF1Q92994 677 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 ZNF512BQ96KM6 892 aaPredicted RBP11.62□□□□□ -0.55
MDH1-201ENST00000233114 SEC62Q99442 399 aaKnown RBP11.62□□□□□ -0.55
MDH1-201ENST00000233114 MYH7P12883 1935 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 MAP3K15Q6ZN16 1313 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 SALL1Q9NSC2 1324 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 GOLGA6L6A8MZA4 724 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 TIMM10P62072 90 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 SCRN1Q12765 414 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 STK3Q13188 491 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 FERMT3Q86UX7 667 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 MICALL2Q8IY33 904 aa11.62□□□□□ -0.55
MDH1-201ENST00000233114 NSUN7Q8NE18 718 aaKnown RBP11.62□□□□□ -0.55
MDH1-201ENST00000233114 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
MDH1-201ENST00000233114 DDX60Q8IY21 1712 aaKnown RBP11.61□□□□□ -0.55
MDH1-201ENST00000233114 DISP2A7MBM2 1401 aa11.61□□□□□ -0.55
MDH1-201ENST00000233114 ATRNO75882 1429 aa11.61□□□□□ -0.55
MDH1-201ENST00000233114 ITGB4P16144 1822 aa11.61□□□□□ -0.55
MDH1-201ENST00000233114 E7EWF7 191 aa11.61□□□□□ -0.55
MDH1-201ENST00000233114 CTAGE5O15320 804 aa11.61□□□□□ -0.55
MDH1-201ENST00000233114 RRP9O43818 475 aaKnown RBP11.61□□□□□ -0.55
MDH1-201ENST00000233114 JAK2O60674 1132 aa11.61□□□□□ -0.55
MDH1-201ENST00000233114 IGSF3O75054 1194 aa11.61□□□□□ -0.55
MDH1-201ENST00000233114 EVA1CP58658 441 aa11.61□□□□□ -0.55
MDH1-201ENST00000233114 TYRO3Q06418 890 aa11.61□□□□□ -0.55
MDH1-201ENST00000233114 TTC39AQ5SRH9 613 aa11.61□□□□□ -0.55
MDH1-201ENST00000233114 GIGYF2Q6Y7W6 1299 aaKnown RBP11.61□□□□□ -0.55
MDH1-201ENST00000233114 TNMDQ9H2S6 317 aa11.61□□□□□ -0.55
MDH1-201ENST00000233114 COL14A1Q05707 1796 aaKnown RBP11.61□□□□□ -0.55
MDH1-201ENST00000233114 MYH3P11055 1940 aa11.61□□□□□ -0.55
MDH1-201ENST00000233114 LIG1P18858 919 aa11.6□□□□□ -0.55
MDH1-201ENST00000233114 IFIT5Q13325 482 aaKnown RBP11.6□□□□□ -0.55
MDH1-201ENST00000233114 VARS2Q5ST30 1063 aaKnown RBP11.6□□□□□ -0.55
MDH1-201ENST00000233114 GORABQ5T7V8 394 aa11.6□□□□□ -0.55
MDH1-201ENST00000233114 ZSCAN25Q6NSZ9 544 aa11.6□□□□□ -0.55
MDH1-201ENST00000233114 PIBF1Q8WXW3 757 aa11.6□□□□□ -0.55
MDH1-201ENST00000233114 APPBP2Q92624 585 aa11.6□□□□□ -0.55
MDH1-201ENST00000233114 ZNF396Q96N95 335 aaPredicted RBP11.6□□□□□ -0.55
MDH1-201ENST00000233114 NDUFB9Q9Y6M9 179 aa11.6□□□□□ -0.55
MDH1-201ENST00000233114 RIC1Q4ADV7 1423 aa11.6□□□□□ -0.55
MDH1-201ENST00000233114 LRP5O75197 1615 aa11.6□□□□□ -0.55
MDH1-201ENST00000233114 PTPDC1A2A3K4 754 aa11.59□□□□□ -0.55
MDH1-201ENST00000233114 DHX16O60231 1041 aaKnown RBP11.59□□□□□ -0.55
MDH1-201ENST00000233114 IMMTQ16891 758 aaKnown RBP11.59□□□□□ -0.55
MDH1-201ENST00000233114 TMEM92Q6UXU6 159 aa11.59□□□□□ -0.55
MDH1-201ENST00000233114 XAGE2Q96GT9 111 aa11.59□□□□□ -0.55
MDH1-201ENST00000233114 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.59□□□□□ -0.55
MDH1-201ENST00000233114 DACT1Q9NYF0 836 aa11.59□□□□□ -0.55
MDH1-201ENST00000233114 RCOR1Q9UKL0 485 aa11.59□□□□□ -0.55
MDH1-201ENST00000233114 TTF1Q15361 905 aaPredicted RBP11.59□□□□□ -0.55
MDH1-201ENST00000233114 SASS6Q6UVJ0 657 aa11.59□□□□□ -0.55
MDH1-201ENST00000233114 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.59□□□□□ -0.55
MDH1-201ENST00000233114 ZNF594Q96JF6 807 aaPredicted RBP11.59□□□□□ -0.55
MDH1-201ENST00000233114 AK7Q96M32 723 aa11.59□□□□□ -0.55
MDH1-201ENST00000233114 PUS3Q9BZE2 481 aaKnown RBP11.59□□□□□ -0.55
MDH1-201ENST00000233114 SPTLC3Q9NUV7 552 aa11.59□□□□□ -0.55
MDH1-201ENST00000233114 MRVI1Q9Y6F6 885 aa11.59□□□□□ -0.55
MDH1-201ENST00000233114 ARAP2Q8WZ64 1704 aa11.58□□□□□ -0.55
MDH1-201ENST00000233114 NWD2Q9ULI1 1742 aa11.58□□□□□ -0.56
MDH1-201ENST00000233114 BCL9O00512 1426 aa11.58□□□□□ -0.56
MDH1-201ENST00000233114 ERVV-1B6SEH8 477 aa11.58□□□□□ -0.56
MDH1-201ENST00000233114 M0R2C6 588 aa11.58□□□□□ -0.56
MDH1-201ENST00000233114 PDIA3P30101 505 aaKnown RBP11.58□□□□□ -0.56
MDH1-201ENST00000233114 TDRD7Q8NHU6 1098 aaKnown RBP11.58□□□□□ -0.56
MDH1-201ENST00000233114 BICD2Q8TD16 824 aa11.58□□□□□ -0.56
MDH1-201ENST00000233114 PIGBQ92521 554 aa11.58□□□□□ -0.56
MDH1-201ENST00000233114 OSBP2Q969R2 916 aa11.58□□□□□ -0.56
MDH1-201ENST00000233114 PGBD1Q96JS3 809 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms