RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 ZBED3Q96IU2 234 aaPredicted RBP22.61■■□□□ 1.21
PFN1-201ENST00000225655 SCAF8Q9UPN6 1271 aaKnown RBP22.61■■□□□ 1.21
PFN1-201ENST00000225655 KIF16BQ96L93 1317 aa22.6■■□□□ 1.21
PFN1-201ENST00000225655 FKBP1AP62942 108 aaKnown RBP22.6■■□□□ 1.21
PFN1-201ENST00000225655 CERS5Q8N5B7 392 aa22.6■■□□□ 1.21
PFN1-201ENST00000225655 BICC1Q9H694 974 aaKnown RBP22.6■■□□□ 1.21
PFN1-201ENST00000225655 KIF23Q02241 960 aaPredicted RBP22.59■■□□□ 1.21
PFN1-201ENST00000225655 UBE4AQ14139 1066 aa22.59■■□□□ 1.21
PFN1-201ENST00000225655 APOBEC3FQ8IUX4 373 aaKnown RBP22.59■■□□□ 1.21
PFN1-201ENST00000225655 ANKRD44Q8N8A2 993 aa22.58■■□□□ 1.21
PFN1-201ENST00000225655 MTMR14Q8NCE2 650 aa22.58■■□□□ 1.21
PFN1-201ENST00000225655 PUS3Q9BZE2 481 aaKnown RBP22.58■■□□□ 1.21
PFN1-201ENST00000225655 RIPOR2Q9Y4F9 1068 aa22.58■■□□□ 1.21
PFN1-201ENST00000225655 ECM29Q5VYK3 1845 aa22.58■■□□□ 1.21
PFN1-201ENST00000225655 MROH5Q6ZUA9 1318 aa22.57■■□□□ 1.2
PFN1-201ENST00000225655 IPO8O15397 1037 aaKnown RBP22.57■■□□□ 1.2
PFN1-201ENST00000225655 PRAMEF18Q5VWM3 479 aa22.57■■□□□ 1.2
PFN1-201ENST00000225655 RASAL3Q86YV0 1011 aa22.57■■□□□ 1.2
PFN1-201ENST00000225655 USP44Q9H0E7 712 aa22.57■■□□□ 1.2
PFN1-201ENST00000225655 SAGE1Q9NXZ1 904 aa22.57■■□□□ 1.2
PFN1-201ENST00000225655 AKAP11Q9UKA4 1901 aa22.57■■□□□ 1.2
PFN1-201ENST00000225655 NF2P35240 595 aa22.56■■□□□ 1.2
PFN1-201ENST00000225655 DLGAP5Q15398 846 aa22.56■■□□□ 1.2
PFN1-201ENST00000225655 MOB2Q70IA6 237 aa22.56■■□□□ 1.2
PFN1-201ENST00000225655 COL1A1P02452 1464 aaPredicted RBP22.55■■□□□ 1.2
PFN1-201ENST00000225655 REM2Q8IYK8 340 aaPredicted RBP22.55■■□□□ 1.2
PFN1-201ENST00000225655 TDRD7Q8NHU6 1098 aaKnown RBP22.55■■□□□ 1.2
PFN1-201ENST00000225655 RCAN3Q9UKA8 241 aa22.55■■□□□ 1.2
PFN1-201ENST00000225655 CASP8AP2Q9UKL3 1982 aa22.55■■□□□ 1.2
PFN1-201ENST00000225655 FAM205AQ6ZU69 1335 aa22.55■■□□□ 1.2
PFN1-201ENST00000225655 HIBADHP31937 336 aaKnown RBP22.54■■□□□ 1.2
PFN1-201ENST00000225655 ABHD8Q96I13 439 aa22.54■■□□□ 1.2
PFN1-201ENST00000225655 FAM84BQ96KN1 310 aaPredicted RBP22.54■■□□□ 1.2
PFN1-201ENST00000225655 API5Q9BZZ5 524 aaKnown RBP22.54■■□□□ 1.2
PFN1-201ENST00000225655 F8W031 263 aaPredicted RBP22.53■■□□□ 1.2
PFN1-201ENST00000225655 UBE2Q2LH0YL09 131 aa22.53■■□□□ 1.2
PFN1-201ENST00000225655 GYG1P46976 350 aa22.53■■□□□ 1.2
PFN1-201ENST00000225655 TTLL12Q14166 644 aaPredicted RBP22.53■■□□□ 1.2
PFN1-201ENST00000225655 CSRNP1Q96S65 589 aa22.53■■□□□ 1.2
PFN1-201ENST00000225655 JAG2Q9Y219 1238 aa22.53■■□□□ 1.2
PFN1-201ENST00000225655 ARAP2Q8WZ64 1704 aa22.53■■□□□ 1.2
PFN1-201ENST00000225655 SPDYE2BA6NHP3 402 aa22.52■■□□□ 1.2
PFN1-201ENST00000225655 MYO1BO43795 1136 aa22.52■■□□□ 1.2
PFN1-201ENST00000225655 SPDYE6P0CI01 402 aa22.52■■□□□ 1.2
PFN1-201ENST00000225655 CFAP100Q494V2 611 aa22.52■■□□□ 1.2
PFN1-201ENST00000225655 LRRC24Q50LG9 513 aa22.52■■□□□ 1.2
PFN1-201ENST00000225655 DEFB129Q9H1M3 183 aa22.52■■□□□ 1.2
PFN1-201ENST00000225655 NOB1Q9ULX3 412 aaKnown RBP22.52■■□□□ 1.2
PFN1-201ENST00000225655 METTL24Q5JXM2 366 aa22.51■■□□□ 1.19
PFN1-201ENST00000225655 VGLL2Q8N8G2 317 aa22.51■■□□□ 1.19
PFN1-201ENST00000225655 ARHGAP45Q92619 1136 aa22.51■■□□□ 1.19
PFN1-201ENST00000225655 FRAT1Q92837 279 aaPredicted RBP22.51■■□□□ 1.19
PFN1-201ENST00000225655 RNF186Q9NXI6 227 aa22.51■■□□□ 1.19
PFN1-201ENST00000225655 PPP2R3BQ9Y5P8 575 aa22.51■■□□□ 1.19
PFN1-201ENST00000225655 BCAR3O75815 825 aa22.5■■□□□ 1.19
PFN1-201ENST00000225655 PDE8BO95263 885 aa22.5■■□□□ 1.19
PFN1-201ENST00000225655 MFSD14BQ5SR56 506 aa22.5■■□□□ 1.19
PFN1-201ENST00000225655 ARMC9Q7Z3E5 817 aa22.5■■□□□ 1.19
PFN1-201ENST00000225655 PRMT6Q96LA8 375 aaPredicted RBP22.5■■□□□ 1.19
PFN1-201ENST00000225655 PCDHAC2Q9Y5I4 1007 aa22.5■■□□□ 1.19
PFN1-201ENST00000225655 TRPA1O75762 1119 aa22.49■■□□□ 1.19
PFN1-201ENST00000225655 ZKSCAN2Q63HK3 967 aa22.49■■□□□ 1.19
PFN1-201ENST00000225655 FBXO33Q7Z6M2 555 aa22.49■■□□□ 1.19
PFN1-201ENST00000225655 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.49■■□□□ 1.19
PFN1-201ENST00000225655 VPS37DQ86XT2 251 aa22.48■■□□□ 1.19
PFN1-201ENST00000225655 KLHDC4Q8TBB5 520 aa22.48■■□□□ 1.19
PFN1-201ENST00000225655 SERPINA10Q9UK55 444 aa22.48■■□□□ 1.19
PFN1-201ENST00000225655 RBM5P52756 815 aaKnown RBP eCLIP22.47■■□□□ 1.19
PFN1-201ENST00000225655 CAVIN4Q5BKX8 364 aa22.47■■□□□ 1.19
PFN1-201ENST00000225655 LDLRAD1Q5T700 205 aa22.47■■□□□ 1.19
PFN1-201ENST00000225655 TTF2Q9UNY4 1162 aaKnown RBP22.47■■□□□ 1.19
PFN1-201ENST00000225655 CLRN2A0PK11 232 aa22.46■■□□□ 1.19
PFN1-201ENST00000225655 MS4A1P11836 297 aa22.46■■□□□ 1.19
PFN1-201ENST00000225655 RFX5P48382 616 aaPredicted RBP22.46■■□□□ 1.19
PFN1-201ENST00000225655 PTPN12Q05209 780 aaKnown RBP22.46■■□□□ 1.19
PFN1-201ENST00000225655 MCOLN1Q9GZU1 580 aa22.46■■□□□ 1.19
PFN1-201ENST00000225655 AOX1Q06278 1338 aa22.46■■□□□ 1.19
PFN1-201ENST00000225655 SSC5DA1L4H1 1573 aa22.46■■□□□ 1.19
PFN1-201ENST00000225655 UBTFL1P0CB47 393 aaPredicted RBP22.45■■□□□ 1.18
PFN1-201ENST00000225655 PRKG1Q13976 671 aa22.45■■□□□ 1.18
PFN1-201ENST00000225655 PUM3Q15397 648 aaKnown RBP22.45■■□□□ 1.18
PFN1-201ENST00000225655 ATF7IPQ6VMQ6 1270 aa22.45■■□□□ 1.18
PFN1-201ENST00000225655 ANGEL1Q9UNK9 670 aaKnown RBP22.45■■□□□ 1.18
PFN1-201ENST00000225655 EYA2O00167 538 aa22.44■■□□□ 1.18
PFN1-201ENST00000225655 FGFR2P21802 821 aa22.44■■□□□ 1.18
PFN1-201ENST00000225655 DGKZQ13574 1117 aa22.44■■□□□ 1.18
PFN1-201ENST00000225655 MAP3K11Q16584 847 aa22.44■■□□□ 1.18
PFN1-201ENST00000225655 SUPT20HL1Q3ZLR7 823 aa22.44■■□□□ 1.18
PFN1-201ENST00000225655 FTSJ3Q8IY81 847 aaKnown RBP22.44■■□□□ 1.18
PFN1-201ENST00000225655 TBC1D22AQ8WUA7 517 aa22.44■■□□□ 1.18
PFN1-201ENST00000225655 VEZTQ9HBM0 779 aa22.44■■□□□ 1.18
PFN1-201ENST00000225655 TM4SF4P48230 202 aa22.43■■□□□ 1.18
PFN1-201ENST00000225655 SPDYE2Q495Y8 402 aa22.43■■□□□ 1.18
PFN1-201ENST00000225655 IQSEC3Q9UPP2 1182 aaPredicted RBP22.43■■□□□ 1.18
PFN1-201ENST00000225655 UNCXA6NJT0 531 aa22.42■■□□□ 1.18
PFN1-201ENST00000225655 PPP1R12BO60237 982 aaPredicted RBP22.42■■□□□ 1.18
PFN1-201ENST00000225655 FRAT2O75474 233 aaPredicted RBP22.42■■□□□ 1.18
PFN1-201ENST00000225655 IFIT1P09914 478 aaKnown RBP22.42■■□□□ 1.18
PFN1-201ENST00000225655 TNFAIP1Q13829 316 aa22.42■■□□□ 1.18
PFN1-201ENST00000225655 DZIP1LQ8IYY4 767 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms