RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 CHAF1AQ13111 956 aaPredicted RBP17.76■□□□□ 0.43
SUPT4H1-201ENST00000225504 SAMD7Q7Z3H4 446 aa17.76■□□□□ 0.43
SUPT4H1-201ENST00000225504 AGBL3Q8NEM8 1001 aa17.76■□□□□ 0.43
SUPT4H1-201ENST00000225504 DBNDD2Q9BQY9 259 aa17.76■□□□□ 0.43
SUPT4H1-201ENST00000225504 CCDC8Q9H0W5 538 aaPredicted RBP17.76■□□□□ 0.43
SUPT4H1-201ENST00000225504 BCL11AQ9H165 835 aa17.76■□□□□ 0.43
SUPT4H1-201ENST00000225504 ZNF609O15014 1411 aa17.76■□□□□ 0.43
SUPT4H1-201ENST00000225504 FRAT2O75474 233 aaPredicted RBP17.75■□□□□ 0.43
SUPT4H1-201ENST00000225504 HIRAP54198 1017 aaPredicted RBP17.75■□□□□ 0.43
SUPT4H1-201ENST00000225504 GRIK5Q16478 980 aa17.75■□□□□ 0.43
SUPT4H1-201ENST00000225504 EAPPQ56P03 285 aaPredicted RBP17.75■□□□□ 0.43
SUPT4H1-201ENST00000225504 HSP90AB4PQ58FF6 505 aa17.75■□□□□ 0.43
SUPT4H1-201ENST00000225504 RBM26Q5T8P6 1007 aaKnown RBP17.75■□□□□ 0.43
SUPT4H1-201ENST00000225504 DCTPP1Q9H773 170 aa17.75■□□□□ 0.43
SUPT4H1-201ENST00000225504 TLR7Q9NYK1 1049 aaKnown RBP17.75■□□□□ 0.43
SUPT4H1-201ENST00000225504 H7C1D1 291 aa17.75■□□□□ 0.43
SUPT4H1-201ENST00000225504 TOMM70O94826 608 aa17.75■□□□□ 0.43
SUPT4H1-201ENST00000225504 TBC1D10BQ4KMP7 808 aaPredicted RBP17.75■□□□□ 0.43
SUPT4H1-201ENST00000225504 ERC1Q8IUD2 1116 aa17.75■□□□□ 0.43
SUPT4H1-201ENST00000225504 KIAA0825Q8IV33 1275 aa17.75■□□□□ 0.43
SUPT4H1-201ENST00000225504 C16orf71Q8IYS4 520 aaPredicted RBP17.75■□□□□ 0.43
SUPT4H1-201ENST00000225504 TRPM4Q8TD43 1214 aa17.75■□□□□ 0.43
SUPT4H1-201ENST00000225504 SMARCA5O60264 1052 aaPredicted RBP17.74■□□□□ 0.43
SUPT4H1-201ENST00000225504 RAB11FIP3O75154 756 aa17.74■□□□□ 0.43
SUPT4H1-201ENST00000225504 USP17L8P0C7I0 530 aa17.74■□□□□ 0.43
SUPT4H1-201ENST00000225504 ZNF280AP59817 542 aaPredicted RBP17.74■□□□□ 0.43
SUPT4H1-201ENST00000225504 ADARB2Q9NS39 739 aaKnown RBP17.74■□□□□ 0.43
SUPT4H1-201ENST00000225504 ARAP2Q8WZ64 1704 aa17.74■□□□□ 0.43
SUPT4H1-201ENST00000225504 COL1A1P02452 1464 aaPredicted RBP17.73■□□□□ 0.43
SUPT4H1-201ENST00000225504 F8W031 263 aaPredicted RBP17.73■□□□□ 0.43
SUPT4H1-201ENST00000225504 GORABQ5T7V8 394 aa17.73■□□□□ 0.43
SUPT4H1-201ENST00000225504 AACSQ86V21 672 aa17.73■□□□□ 0.43
SUPT4H1-201ENST00000225504 KIF1BPQ96EK5 621 aa17.73■□□□□ 0.43
SUPT4H1-201ENST00000225504 DBNLQ9UJU6 430 aaKnown RBP17.73■□□□□ 0.43
SUPT4H1-201ENST00000225504 CLEC11AQ9Y240 323 aa17.73■□□□□ 0.43
SUPT4H1-201ENST00000225504 RASGRF1Q13972 1273 aa17.72■□□□□ 0.43
SUPT4H1-201ENST00000225504 SCARF1Q14162 830 aa17.72■□□□□ 0.43
SUPT4H1-201ENST00000225504 MFSD14BQ5SR56 506 aa17.72■□□□□ 0.43
SUPT4H1-201ENST00000225504 USP50Q70EL3 339 aaPredicted RBP17.72■□□□□ 0.43
SUPT4H1-201ENST00000225504 PNMA8AQ86V59 439 aaPredicted RBP17.72■□□□□ 0.43
SUPT4H1-201ENST00000225504 GNL3LQ9NVN8 582 aaKnown RBP17.72■□□□□ 0.43
SUPT4H1-201ENST00000225504 IGHDP01880 384 aa17.71■□□□□ 0.43
SUPT4H1-201ENST00000225504 FKBP1AP62942 108 aaKnown RBP17.71■□□□□ 0.43
SUPT4H1-201ENST00000225504 AAMPQ13685 434 aa17.71■□□□□ 0.43
SUPT4H1-201ENST00000225504 PI16Q6UXB8 463 aa17.71■□□□□ 0.43
SUPT4H1-201ENST00000225504 RBM46Q8TBY0 533 aaKnown RBP17.71■□□□□ 0.43
SUPT4H1-201ENST00000225504 PCDHAC2Q9Y5I4 1007 aa17.71■□□□□ 0.43
SUPT4H1-201ENST00000225504 ASTN2O75129 1339 aaPredicted RBP17.71■□□□□ 0.43
SUPT4H1-201ENST00000225504 MYO3BQ8WXR4 1341 aa17.71■□□□□ 0.43
SUPT4H1-201ENST00000225504 MYOZ2Q9NPC6 264 aa17.7■□□□□ 0.42
SUPT4H1-201ENST00000225504 HMG20BQ9P0W2 317 aa17.7■□□□□ 0.42
SUPT4H1-201ENST00000225504 HDAC1Q13547 482 aaPredicted RBP17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 MAP1SQ66K74 1059 aaPredicted RBP17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 LDHDQ86WU2 507 aa17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 CLASRPQ8N2M8 674 aaKnown RBP17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 LRRCC1Q9C099 1032 aa17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 SNRKQ9NRH2 765 aa17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 DENND2AQ9ULE3 1009 aa17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 ADAMTSL1Q8N6G6 1762 aa17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 SEMA3EO15041 775 aa17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 ARID4AP29374 1257 aaPredicted RBP17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 MCAMP43121 646 aa17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 C1QTNF8P60827 252 aa17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 KIF4BQ2VIQ3 1234 aa17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 CHADLQ6NUI6 762 aa17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 OGFOD1Q8N543 542 aa17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 PGAP2Q9UHJ9 254 aa17.69■□□□□ 0.42
SUPT4H1-201ENST00000225504 NBPF9Q3BBW0 867 aa17.68■□□□□ 0.42
SUPT4H1-201ENST00000225504 CCDC158Q5M9N0 1113 aa17.68■□□□□ 0.42
SUPT4H1-201ENST00000225504 TTC39AQ5SRH9 613 aa17.68■□□□□ 0.42
SUPT4H1-201ENST00000225504 TBC1D9Q6ZT07 1266 aa17.68■□□□□ 0.42
SUPT4H1-201ENST00000225504 SPATA5Q8NB90 893 aa17.68■□□□□ 0.42
SUPT4H1-201ENST00000225504 SMC1BQ8NDV3 1235 aa17.68■□□□□ 0.42
SUPT4H1-201ENST00000225504 WDR66Q8TBY9 1149 aa17.68■□□□□ 0.42
SUPT4H1-201ENST00000225504 TBC1D22AQ8WUA7 517 aa17.68■□□□□ 0.42
SUPT4H1-201ENST00000225504 TTF2Q9UNY4 1162 aaKnown RBP17.68■□□□□ 0.42
SUPT4H1-201ENST00000225504 ZBTB22O15209 634 aa17.67■□□□□ 0.42
SUPT4H1-201ENST00000225504 UQCRFS1P1P0C7P4 283 aa17.67■□□□□ 0.42
SUPT4H1-201ENST00000225504 FMR1Q06787 632 aaKnown RBP eCLIP17.67■□□□□ 0.42
SUPT4H1-201ENST00000225504 DLK2Q6UY11 383 aa17.67■□□□□ 0.42
SUPT4H1-201ENST00000225504 MYH13Q9UKX3 1938 aa17.67■□□□□ 0.42
SUPT4H1-201ENST00000225504 AOX1Q06278 1338 aa17.67■□□□□ 0.42
SUPT4H1-201ENST00000225504 ITGBL1O95965 494 aaPredicted RBP17.66■□□□□ 0.42
SUPT4H1-201ENST00000225504 IFIT2P09913 472 aaKnown RBP17.66■□□□□ 0.42
SUPT4H1-201ENST00000225504 PRDX5P30044 214 aa17.66■□□□□ 0.42
SUPT4H1-201ENST00000225504 CNTROBQ8N137 903 aa17.66■□□□□ 0.42
SUPT4H1-201ENST00000225504 ZBED3Q96IU2 234 aaPredicted RBP17.66■□□□□ 0.42
SUPT4H1-201ENST00000225504 PRMT6Q96LA8 375 aaPredicted RBP17.66■□□□□ 0.42
SUPT4H1-201ENST00000225504 RWDD1Q9H446 243 aaPredicted RBP17.66■□□□□ 0.42
SUPT4H1-201ENST00000225504 HDAC9Q9UKV0 1011 aa17.66■□□□□ 0.42
SUPT4H1-201ENST00000225504 SCAF8Q9UPN6 1271 aaKnown RBP17.66■□□□□ 0.42
SUPT4H1-201ENST00000225504 NDUFB9Q9Y6M9 179 aa17.66■□□□□ 0.42
SUPT4H1-201ENST00000225504 WNT10BO00744 389 aa17.65■□□□□ 0.42
SUPT4H1-201ENST00000225504 FSTL1Q12841 308 aa17.65■□□□□ 0.42
SUPT4H1-201ENST00000225504 CFAP100Q494V2 611 aa17.65■□□□□ 0.42
SUPT4H1-201ENST00000225504 ZNF512BQ96KM6 892 aaPredicted RBP17.65■□□□□ 0.42
SUPT4H1-201ENST00000225504 POLR2AP24928 1970 aaKnown RBP17.65■□□□□ 0.42
SUPT4H1-201ENST00000225504 AKAP11Q9UKA4 1901 aa17.65■□□□□ 0.42
SUPT4H1-201ENST00000225504 ZAP70P43403 619 aa17.64■□□□□ 0.41
SUPT4H1-201ENST00000225504 DLGAP5Q15398 846 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms