RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 PUM3Q15397 648 aaKnown RBP11.32□□□□□ -0.6
CRX-201ENST00000221996 RTN1Q16799 776 aa11.32□□□□□ -0.6
CRX-201ENST00000221996 NBPF5PQ86XG9 351 aaPredicted RBP11.32□□□□□ -0.6
CRX-201ENST00000221996 FAM177A1Q8N128 213 aaPredicted RBP11.32□□□□□ -0.6
CRX-201ENST00000221996 ZBTB38Q8NAP3 1195 aaPredicted RBP11.32□□□□□ -0.6
CRX-201ENST00000221996 IL25Q9H293 177 aa11.32□□□□□ -0.6
CRX-201ENST00000221996 MKNK2Q9HBH9 465 aa11.32□□□□□ -0.6
CRX-201ENST00000221996 A0A1B0GVL5 298 aa11.32□□□□□ -0.6
CRX-201ENST00000221996 PCCAP05165 728 aaPredicted RBP11.32□□□□□ -0.6
CRX-201ENST00000221996 TRMT1Q9NXH9 659 aaKnown RBP11.32□□□□□ -0.6
CRX-201ENST00000221996 IPO7O95373 1038 aaKnown RBP11.31□□□□□ -0.6
CRX-201ENST00000221996 KLHL10Q6JEL2 608 aa11.31□□□□□ -0.6
CRX-201ENST00000221996 ATP2B2Q01814 1243 aa11.31□□□□□ -0.6
CRX-201ENST00000221996 AOPEPQ8N6M6 819 aa11.31□□□□□ -0.6
CRX-201ENST00000221996 SMARCC1Q92922 1105 aaPredicted RBP11.31□□□□□ -0.6
CRX-201ENST00000221996 ZKSCAN3Q9BRR0 538 aa11.31□□□□□ -0.6
CRX-201ENST00000221996 CTSWP56202 376 aa11.31□□□□□ -0.6
CRX-201ENST00000221996 PTPN14Q15678 1187 aa11.31□□□□□ -0.6
CRX-201ENST00000221996 CCDC102BQ68D86 513 aa11.31□□□□□ -0.6
CRX-201ENST00000221996 ESR2Q92731 530 aa11.31□□□□□ -0.6
CRX-201ENST00000221996 GREM2Q9H772 168 aa11.31□□□□□ -0.6
CRX-201ENST00000221996 ARMT1Q9H993 441 aa11.31□□□□□ -0.6
CRX-201ENST00000221996 C1orf167Q5SNV9 1468 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 ZNF532Q9HCE3 1301 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 H7C1W4 665 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 TNNT1P13805 278 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 PTGS1P23219 599 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 NAA16Q6N069 864 aaPredicted RBP11.3□□□□□ -0.6
CRX-201ENST00000221996 CLEC17AQ6ZS10 378 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 ANGEL1Q9UNK9 670 aaKnown RBP11.3□□□□□ -0.6
CRX-201ENST00000221996 ZMYM1Q5SVZ6 1142 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 TMC6Q7Z403 805 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 LPIN2Q92539 896 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 NLRP3Q96P20 1036 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 CLSTN2Q9H4D0 955 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 FGAP02671 866 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 DHX8Q14562 1220 aaKnown RBP11.3□□□□□ -0.6
CRX-201ENST00000221996 SLFNL1Q499Z3 407 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 TTC14Q96N46 770 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 SETDB2Q96T68 719 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 GPR108Q9NPR9 543 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 MAP3K15Q6ZN16 1313 aa11.3□□□□□ -0.6
CRX-201ENST00000221996 TSPY2A6NKD2 308 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 CYP2E1P05181 493 aaPredicted RBP11.29□□□□□ -0.6
CRX-201ENST00000221996 GIGYF2Q6Y7W6 1299 aaKnown RBP11.29□□□□□ -0.6
CRX-201ENST00000221996 BRAPQ7Z569 592 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 TMTC2Q8N394 836 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 ZBTB1Q9Y2K1 713 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 REREQ9P2R6 1566 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 MAGEB6P1A0A0J9YX57 407 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 CCP110O43303 1012 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 PFKFB2O60825 505 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 NLRP5P59047 1200 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 FAM160A1Q05DH4 1040 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 SCRN1Q12765 414 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 PPFIBP1Q86W92 1011 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 CCDC87Q9NVE4 849 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 DDIT3P35638 169 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 SOGA3Q5TF21 947 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 ATL3Q6DD88 541 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 SAMD1Q6SPF0 538 aaPredicted RBP11.29□□□□□ -0.6
CRX-201ENST00000221996 PI16Q6UXB8 463 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 MYL10Q9BUA6 226 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 MAST3O60307 1309 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 GNAT2P19087 354 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 C8orf37Q96NL8 207 aa11.29□□□□□ -0.6
CRX-201ENST00000221996 CIAO1O76071 339 aa11.28□□□□□ -0.6
CRX-201ENST00000221996 PARP10Q53GL7 1025 aa11.28□□□□□ -0.6
CRX-201ENST00000221996 IFIT1BQ5T764 474 aaKnown RBP11.28□□□□□ -0.6
CRX-201ENST00000221996 CBX8Q9HC52 389 aa11.28□□□□□ -0.6
CRX-201ENST00000221996 ZNF444Q8N0Y2 327 aaPredicted RBP11.28□□□□□ -0.6
CRX-201ENST00000221996 PIGBQ92521 554 aa11.28□□□□□ -0.6
CRX-201ENST00000221996 ZNF335Q9H4Z2 1342 aaPredicted RBP11.28□□□□□ -0.6
CRX-201ENST00000221996 PXDNLA1KZ92 1463 aa11.28□□□□□ -0.6
CRX-201ENST00000221996 NBPF26B4DH59 902 aa11.28□□□□□ -0.6
CRX-201ENST00000221996 NR1I2O75469 434 aa11.28□□□□□ -0.6
CRX-201ENST00000221996 TOP1P11387 765 aaKnown RBP11.28□□□□□ -0.6
CRX-201ENST00000221996 NBPF14Q5TI25 921 aa11.28□□□□□ -0.6
CRX-201ENST00000221996 NBPF10Q6P3W6 841 aaKnown RBP11.28□□□□□ -0.6
CRX-201ENST00000221996 C17orf53Q8N3J3 647 aaPredicted RBP11.28□□□□□ -0.6
CRX-201ENST00000221996 NBPF15Q8N660 670 aa11.28□□□□□ -0.6
CRX-201ENST00000221996 PHKBQ93100 1093 aa11.28□□□□□ -0.6
CRX-201ENST00000221996 USP28Q96RU2 1077 aa11.28□□□□□ -0.6
CRX-201ENST00000221996 CRNKL1Q9BZJ0 848 aaKnown RBP11.28□□□□□ -0.6
CRX-201ENST00000221996 JAG2Q9Y219 1238 aa11.28□□□□□ -0.6
CRX-201ENST00000221996 NEMFO60524 1076 aa11.27□□□□□ -0.6
CRX-201ENST00000221996 IKQ13123 557 aaPredicted RBP11.27□□□□□ -0.6
CRX-201ENST00000221996 HSP90AA4PQ58FG1 418 aa11.27□□□□□ -0.6
CRX-201ENST00000221996 SPATA5Q8NB90 893 aa11.27□□□□□ -0.6
CRX-201ENST00000221996 ZNF274Q96GC6 653 aaPredicted RBP11.27□□□□□ -0.6
CRX-201ENST00000221996 LMOD1P29536 600 aaPredicted RBP11.27□□□□□ -0.61
CRX-201ENST00000221996 RFC4P35249 363 aa11.27□□□□□ -0.61
CRX-201ENST00000221996 CTDSPL2Q05D32 466 aa11.27□□□□□ -0.61
CRX-201ENST00000221996 CDK5RAP3Q96JB5 506 aa11.27□□□□□ -0.61
CRX-201ENST00000221996 TMEM87BQ96K49 555 aa11.27□□□□□ -0.61
CRX-201ENST00000221996 FBXO3Q9UK99 471 aa11.27□□□□□ -0.61
CRX-201ENST00000221996 PHKA1P46020 1223 aa11.27□□□□□ -0.61
CRX-201ENST00000221996 GSDMDP57764 484 aa11.27□□□□□ -0.61
CRX-201ENST00000221996 PDE4BQ07343 736 aa11.27□□□□□ -0.61
CRX-201ENST00000221996 RPGRQ92834 1020 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms