RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 SASH1O94885 1247 aa20.25■□□□□ 0.83
LIM2-201ENST00000221973 VIL1P09327 827 aaKnown RBP20.25■□□□□ 0.83
LIM2-201ENST00000221973 RPS12P25398 132 aaKnown RBP20.25■□□□□ 0.83
LIM2-201ENST00000221973 ECE1P42892 770 aa20.25■□□□□ 0.83
LIM2-201ENST00000221973 TBC1D10BQ4KMP7 808 aaPredicted RBP20.25■□□□□ 0.83
LIM2-201ENST00000221973 B4GALNT3Q6L9W6 998 aa20.25■□□□□ 0.83
LIM2-201ENST00000221973 ZC3H12CQ9C0D7 883 aaKnown RBP20.25■□□□□ 0.83
LIM2-201ENST00000221973 POLR2AP24928 1970 aaKnown RBP20.25■□□□□ 0.83
LIM2-201ENST00000221973 TAF5LO75529 589 aa20.24■□□□□ 0.83
LIM2-201ENST00000221973 TFCP2Q12800 502 aa20.24■□□□□ 0.83
LIM2-201ENST00000221973 GRM1Q13255 1194 aa20.24■□□□□ 0.83
LIM2-201ENST00000221973 PAXIP1Q6ZW49 1069 aaPredicted RBP20.24■□□□□ 0.83
LIM2-201ENST00000221973 USP48Q86UV5 1035 aa20.24■□□□□ 0.83
LIM2-201ENST00000221973 HHIPL1Q96JK4 782 aa20.24■□□□□ 0.83
LIM2-201ENST00000221973 ANKRD2Q9GZV1 360 aa20.24■□□□□ 0.83
LIM2-201ENST00000221973 ANKIB1Q9P2G1 1089 aa20.24■□□□□ 0.83
LIM2-201ENST00000221973 CEP126Q9P2H0 1117 aa20.24■□□□□ 0.83
LIM2-201ENST00000221973 GGA1Q9UJY5 639 aa20.24■□□□□ 0.83
LIM2-201ENST00000221973 RAB11FIP3O75154 756 aa20.23■□□□□ 0.83
LIM2-201ENST00000221973 ERC1Q8IUD2 1116 aa20.23■□□□□ 0.83
LIM2-201ENST00000221973 GCC1Q96CN9 775 aa20.23■□□□□ 0.83
LIM2-201ENST00000221973 BCL11AQ9H165 835 aa20.23■□□□□ 0.83
LIM2-201ENST00000221973 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.23■□□□□ 0.83
LIM2-201ENST00000221973 ZNF609O15014 1411 aa20.22■□□□□ 0.83
LIM2-201ENST00000221973 MAP2K2P36507 400 aa20.22■□□□□ 0.83
LIM2-201ENST00000221973 VGLL2Q8N8G2 317 aa20.22■□□□□ 0.83
LIM2-201ENST00000221973 RHPN1Q8TCX5 695 aa20.22■□□□□ 0.83
LIM2-201ENST00000221973 KIF1BPQ96EK5 621 aa20.22■□□□□ 0.83
LIM2-201ENST00000221973 ZNF408Q9H9D4 720 aa20.22■□□□□ 0.83
LIM2-201ENST00000221973 GTF3C3Q9Y5Q9 886 aa20.22■□□□□ 0.83
LIM2-201ENST00000221973 PSME4Q14997 1843 aa20.22■□□□□ 0.83
LIM2-201ENST00000221973 XDHP47989 1333 aa20.22■□□□□ 0.83
LIM2-201ENST00000221973 SPEF2Q9C093 1822 aa20.21■□□□□ 0.83
LIM2-201ENST00000221973 SNAP23O00161 211 aa20.21■□□□□ 0.83
LIM2-201ENST00000221973 PDE8BO95263 885 aa20.21■□□□□ 0.83
LIM2-201ENST00000221973 SMC5Q8IY18 1101 aa20.21■□□□□ 0.83
LIM2-201ENST00000221973 IL1RAPL2Q9NP60 686 aa20.21■□□□□ 0.83
LIM2-201ENST00000221973 ASTN2O75129 1339 aaPredicted RBP20.21■□□□□ 0.83
LIM2-201ENST00000221973 SMARCA5O60264 1052 aaPredicted RBP20.2■□□□□ 0.82
LIM2-201ENST00000221973 KCNJ4P48050 445 aa20.2■□□□□ 0.82
LIM2-201ENST00000221973 RBM26Q5T8P6 1007 aaKnown RBP20.2■□□□□ 0.82
LIM2-201ENST00000221973 KRT26Q7Z3Y9 468 aa20.2■□□□□ 0.82
LIM2-201ENST00000221973 GMLQ99445 158 aa20.2■□□□□ 0.82
LIM2-201ENST00000221973 LRRCC1Q9C099 1032 aa20.2■□□□□ 0.82
LIM2-201ENST00000221973 ADM5C9JUS6 153 aa20.19■□□□□ 0.82
LIM2-201ENST00000221973 ATP2B4P23634 1241 aa20.19■□□□□ 0.82
LIM2-201ENST00000221973 ZNF280AP59817 542 aaPredicted RBP20.19■□□□□ 0.82
LIM2-201ENST00000221973 ANKRD45Q5TZF3 282 aa20.19■□□□□ 0.82
LIM2-201ENST00000221973 ZIC5Q96T25 663 aa20.19■□□□□ 0.82
LIM2-201ENST00000221973 LEMD3Q9Y2U8 911 aa20.19■□□□□ 0.82
LIM2-201ENST00000221973 ZNF646O15015 1829 aaPredicted RBP20.18■□□□□ 0.82
LIM2-201ENST00000221973 PUM3Q15397 648 aaKnown RBP20.18■□□□□ 0.82
LIM2-201ENST00000221973 KIF4BQ2VIQ3 1234 aa20.18■□□□□ 0.82
LIM2-201ENST00000221973 RSBN1LQ6PCB5 846 aaPredicted RBP20.18■□□□□ 0.82
LIM2-201ENST00000221973 ZNF804BA4D1E1 1349 aa20.18■□□□□ 0.82
LIM2-201ENST00000221973 TIMM10P62072 90 aa20.17■□□□□ 0.82
LIM2-201ENST00000221973 ATP2B3Q16720 1220 aa20.17■□□□□ 0.82
LIM2-201ENST00000221973 TNNI3KQ59H18 835 aa20.17■□□□□ 0.82
LIM2-201ENST00000221973 CENPQQ7L2Z9 268 aaPredicted RBP20.17■□□□□ 0.82
LIM2-201ENST00000221973 ZBTB47Q9UFB7 747 aaPredicted RBP20.17■□□□□ 0.82
LIM2-201ENST00000221973 TSKSQ9UJT2 592 aa20.17■□□□□ 0.82
LIM2-201ENST00000221973 AKAP2Q9Y2D5 859 aa20.17■□□□□ 0.82
LIM2-201ENST00000221973 FPGT-TNNI3KV9GXZ4 949 aa20.17■□□□□ 0.82
LIM2-201ENST00000221973 FGFR2P21802 821 aa20.16■□□□□ 0.82
LIM2-201ENST00000221973 HUNKP57058 714 aa20.16■□□□□ 0.82
LIM2-201ENST00000221973 UBE4AQ14139 1066 aa20.16■□□□□ 0.82
LIM2-201ENST00000221973 CLASRPQ8N2M8 674 aaKnown RBP20.16■□□□□ 0.82
LIM2-201ENST00000221973 AGBL3Q8NEM8 1001 aa20.16■□□□□ 0.82
LIM2-201ENST00000221973 NEUROD6Q96NK8 337 aa20.16■□□□□ 0.82
LIM2-201ENST00000221973 GGA3Q9NZ52 723 aa20.16■□□□□ 0.82
LIM2-201ENST00000221973 A0A1B0GUL7 405 aa20.15■□□□□ 0.82
LIM2-201ENST00000221973 FAM155AB1AL88 458 aaPredicted RBP20.15■□□□□ 0.82
LIM2-201ENST00000221973 G3V3G9 751 aa20.15■□□□□ 0.82
LIM2-201ENST00000221973 IFIT1P09914 478 aaKnown RBP20.15■□□□□ 0.82
LIM2-201ENST00000221973 SLC5A1P13866 664 aa20.15■□□□□ 0.82
LIM2-201ENST00000221973 DCAF8Q5TAQ9 597 aa20.15■□□□□ 0.82
LIM2-201ENST00000221973 AACSQ86V21 672 aa20.15■□□□□ 0.82
LIM2-201ENST00000221973 TXNRD3Q86VQ6 643 aa20.15■□□□□ 0.82
LIM2-201ENST00000221973 LPIN2Q92539 896 aa20.15■□□□□ 0.82
LIM2-201ENST00000221973 DCPSQ96C86 337 aaKnown RBP20.15■□□□□ 0.82
LIM2-201ENST00000221973 EAF2Q96CJ1 260 aaPredicted RBP20.15■□□□□ 0.82
LIM2-201ENST00000221973 GPR108Q9NPR9 543 aa20.15■□□□□ 0.82
LIM2-201ENST00000221973 MED23Q9ULK4 1368 aa20.15■□□□□ 0.82
LIM2-201ENST00000221973 KLRK1P26718 216 aa20.14■□□□□ 0.81
LIM2-201ENST00000221973 NUCB1Q02818 461 aa20.14■□□□□ 0.81
LIM2-201ENST00000221973 PODNQ7Z5L7 613 aa20.14■□□□□ 0.81
LIM2-201ENST00000221973 BEGAINQ9BUH8 593 aa20.14■□□□□ 0.81
LIM2-201ENST00000221973 LNPKQ9C0E8 428 aa20.14■□□□□ 0.81
LIM2-201ENST00000221973 CCDC8Q9H0W5 538 aaPredicted RBP20.14■□□□□ 0.81
LIM2-201ENST00000221973 GBA2Q9HCG7 927 aaPredicted RBP20.14■□□□□ 0.81
LIM2-201ENST00000221973 USP17L3A6NCW0 530 aa20.13■□□□□ 0.81
LIM2-201ENST00000221973 USP17L4A6NCW7 530 aa20.13■□□□□ 0.81
LIM2-201ENST00000221973 ADORA1P30542 326 aa20.13■□□□□ 0.81
LIM2-201ENST00000221973 SCARF1Q14162 830 aa20.13■□□□□ 0.81
LIM2-201ENST00000221973 USP17L1Q7RTZ2 530 aa20.13■□□□□ 0.81
LIM2-201ENST00000221973 CHD1LQ86WJ1 897 aa20.13■□□□□ 0.81
LIM2-201ENST00000221973 IFIT2P09913 472 aaKnown RBP20.12■□□□□ 0.81
LIM2-201ENST00000221973 NOGQ13253 232 aa20.12■□□□□ 0.81
LIM2-201ENST00000221973 XAGE2Q96GT9 111 aa20.12■□□□□ 0.81
LIM2-201ENST00000221973 ABHD8Q96I13 439 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms