RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 ZBTB1Q9Y2K1 713 aa18.62■□□□□ 0.57
SF3A2-201ENST00000221494 PALLDQ8WX93 1383 aa18.62■□□□□ 0.57
SF3A2-201ENST00000221494 HMGB1P09429 215 aaKnown RBP18.61■□□□□ 0.57
SF3A2-201ENST00000221494 SEPT12Q8IYM1 358 aa18.61■□□□□ 0.57
SF3A2-201ENST00000221494 SMARCC2Q8TAQ2 1214 aa18.61■□□□□ 0.57
SF3A2-201ENST00000221494 FSD1Q9BTV5 496 aa18.61■□□□□ 0.57
SF3A2-201ENST00000221494 U3KPZ7 1027 aaPredicted RBP18.61■□□□□ 0.57
SF3A2-201ENST00000221494 ATP6V1AP38606 617 aa18.61■□□□□ 0.57
SF3A2-201ENST00000221494 FAM182BQ5T319 152 aa18.61■□□□□ 0.57
SF3A2-201ENST00000221494 NAT10Q9H0A0 1025 aaKnown RBP18.61■□□□□ 0.57
SF3A2-201ENST00000221494 TFIP11Q9UBB9 837 aaKnown RBP18.61■□□□□ 0.57
SF3A2-201ENST00000221494 A0A0D9SFI3 127 aa18.6■□□□□ 0.57
SF3A2-201ENST00000221494 TAF5LO75529 589 aa18.6■□□□□ 0.57
SF3A2-201ENST00000221494 ITPK1Q13572 414 aa18.6■□□□□ 0.57
SF3A2-201ENST00000221494 CCDC144BQ3MJ40 725 aa18.6■□□□□ 0.57
SF3A2-201ENST00000221494 CCDC144CPQ8IYA2 1237 aa18.6■□□□□ 0.57
SF3A2-201ENST00000221494 OSBPL5Q9H0X9 879 aaPredicted RBP18.6■□□□□ 0.57
SF3A2-201ENST00000221494 CHMP3Q9Y3E7 222 aa18.6■□□□□ 0.57
SF3A2-201ENST00000221494 ZNF330Q9Y3S2 320 aaPredicted RBP18.6■□□□□ 0.57
SF3A2-201ENST00000221494 H3BQV1 296 aa18.59■□□□□ 0.57
SF3A2-201ENST00000221494 SASH1O94885 1247 aa18.59■□□□□ 0.57
SF3A2-201ENST00000221494 IFFO2Q5TF58 517 aa18.59■□□□□ 0.57
SF3A2-201ENST00000221494 FAM173BQ6P4H8 233 aa18.59■□□□□ 0.57
SF3A2-201ENST00000221494 INTS5Q6P9B9 1019 aaKnown RBP18.59■□□□□ 0.57
SF3A2-201ENST00000221494 BRF1Q92994 677 aa18.59■□□□□ 0.57
SF3A2-201ENST00000221494 ZNF396Q96N95 335 aaPredicted RBP18.59■□□□□ 0.57
SF3A2-201ENST00000221494 LAMA4Q16363 1823 aa18.59■□□□□ 0.57
SF3A2-201ENST00000221494 KAT6BQ8WYB5 2073 aa18.59■□□□□ 0.57
SF3A2-201ENST00000221494 CCDC66A2RUB6 948 aa18.59■□□□□ 0.57
SF3A2-201ENST00000221494 IL6STP40189 918 aaPredicted RBP18.59■□□□□ 0.57
SF3A2-201ENST00000221494 CCDC73Q6ZRK6 1079 aa18.59■□□□□ 0.57
SF3A2-201ENST00000221494 ZNF771Q7L3S4 317 aaPredicted RBP18.59■□□□□ 0.57
SF3A2-201ENST00000221494 EAF2Q96CJ1 260 aaPredicted RBP18.59■□□□□ 0.57
SF3A2-201ENST00000221494 NEK1Q96PY6 1258 aa18.59■□□□□ 0.57
SF3A2-201ENST00000221494 SLFN14P0C7P3 912 aa18.58■□□□□ 0.56
SF3A2-201ENST00000221494 SKILP12757 684 aa18.58■□□□□ 0.56
SF3A2-201ENST00000221494 CASP7P55210 303 aa18.58■□□□□ 0.56
SF3A2-201ENST00000221494 CEP57L1Q8IYX8 460 aa18.58■□□□□ 0.56
SF3A2-201ENST00000221494 BPIFA3Q9BQP9 254 aa18.58■□□□□ 0.56
SF3A2-201ENST00000221494 BICC1Q9H694 974 aaKnown RBP18.58■□□□□ 0.56
SF3A2-201ENST00000221494 COL15A1P39059 1388 aa18.58■□□□□ 0.56
SF3A2-201ENST00000221494 A0A087WZG4 1122 aa18.57■□□□□ 0.56
SF3A2-201ENST00000221494 BECN2A8MW95 431 aa18.57■□□□□ 0.56
SF3A2-201ENST00000221494 CCZ1BP86790 482 aa18.57■□□□□ 0.56
SF3A2-201ENST00000221494 CCZ1P86791 482 aaPredicted RBP18.57■□□□□ 0.56
SF3A2-201ENST00000221494 FAM160A1Q05DH4 1040 aa18.57■□□□□ 0.56
SF3A2-201ENST00000221494 TCIRG1Q13488 830 aa18.57■□□□□ 0.56
SF3A2-201ENST00000221494 KIF6Q6ZMV9 814 aa18.57■□□□□ 0.56
SF3A2-201ENST00000221494 CCAR2Q8N163 923 aaKnown RBP18.57■□□□□ 0.56
SF3A2-201ENST00000221494 BBXQ8WY36 941 aaPredicted RBP18.57■□□□□ 0.56
SF3A2-201ENST00000221494 ISCA1Q9BUE6 129 aa18.57■□□□□ 0.56
SF3A2-201ENST00000221494 MAP3K15Q6ZN16 1313 aa18.57■□□□□ 0.56
SF3A2-201ENST00000221494 H7C1W4 665 aa18.57■□□□□ 0.56
SF3A2-201ENST00000221494 PFKFB2O60825 505 aa18.57■□□□□ 0.56
SF3A2-201ENST00000221494 SLU7O95391 586 aaKnown RBP18.57■□□□□ 0.56
SF3A2-201ENST00000221494 ATP5JP18859 108 aa18.57■□□□□ 0.56
SF3A2-201ENST00000221494 CRKLP46109 303 aaKnown RBP18.57■□□□□ 0.56
SF3A2-201ENST00000221494 CCDC191Q8NCU4 936 aa18.57■□□□□ 0.56
SF3A2-201ENST00000221494 CCDC150Q8NCX0 1101 aa18.57■□□□□ 0.56
SF3A2-201ENST00000221494 CCDC87Q9NVE4 849 aa18.57■□□□□ 0.56
SF3A2-201ENST00000221494 TJP1Q07157 1748 aa18.57■□□□□ 0.56
SF3A2-201ENST00000221494 PSDA5PKW4 1024 aaPredicted RBP18.56■□□□□ 0.56
SF3A2-201ENST00000221494 CCDC69A6NI79 296 aa18.56■□□□□ 0.56
SF3A2-201ENST00000221494 KINO60870 393 aaKnown RBP18.56■□□□□ 0.56
SF3A2-201ENST00000221494 EIF5P55010 431 aaKnown RBP18.56■□□□□ 0.56
SF3A2-201ENST00000221494 TRIM28Q13263 835 aaKnown RBP18.56■□□□□ 0.56
SF3A2-201ENST00000221494 EPHA10Q5JZY3 1008 aa18.56■□□□□ 0.56
SF3A2-201ENST00000221494 UBE3BQ7Z3V4 1068 aa18.56■□□□□ 0.56
SF3A2-201ENST00000221494 L2HGDHQ9H9P8 463 aa18.56■□□□□ 0.56
SF3A2-201ENST00000221494 CWC25Q9NXE8 425 aaPredicted RBP18.56■□□□□ 0.56
SF3A2-201ENST00000221494 ARFGEF2Q9Y6D5 1785 aa18.56■□□□□ 0.56
SF3A2-201ENST00000221494 ADD1P35611 737 aaKnown RBP18.55■□□□□ 0.56
SF3A2-201ENST00000221494 TERF2Q15554 542 aa18.55■□□□□ 0.56
SF3A2-201ENST00000221494 RGS22Q8NE09 1264 aa18.55■□□□□ 0.56
SF3A2-201ENST00000221494 PA2G4Q9UQ80 394 aaKnown RBP18.55■□□□□ 0.56
SF3A2-201ENST00000221494 CCP110O43303 1012 aa18.55■□□□□ 0.56
SF3A2-201ENST00000221494 NRDCO43847 1150 aa18.55■□□□□ 0.56
SF3A2-201ENST00000221494 CHRM1P11229 460 aaPredicted RBP18.55■□□□□ 0.56
SF3A2-201ENST00000221494 GIGYF2Q6Y7W6 1299 aaKnown RBP18.55■□□□□ 0.56
SF3A2-201ENST00000221494 TEX2Q8IWB9 1127 aa18.55■□□□□ 0.56
SF3A2-201ENST00000221494 CCAR1Q8IX12 1150 aaKnown RBP18.55■□□□□ 0.56
SF3A2-201ENST00000221494 ENGASEQ8NFI3 743 aa18.55■□□□□ 0.56
SF3A2-201ENST00000221494 HLFQ16534 295 aa18.54■□□□□ 0.56
SF3A2-201ENST00000221494 C11orf57Q6ZUT1 292 aaPredicted RBP18.54■□□□□ 0.56
SF3A2-201ENST00000221494 DHX40Q8IX18 779 aaKnown RBP18.54■□□□□ 0.56
SF3A2-201ENST00000221494 ZNF215Q9UL58 517 aaPredicted RBP18.54■□□□□ 0.56
SF3A2-201ENST00000221494 A0A1W2PQ27 194 aa18.53■□□□□ 0.56
SF3A2-201ENST00000221494 A0A1W2PQ64 194 aa18.53■□□□□ 0.56
SF3A2-201ENST00000221494 A0A1W2PQD8 194 aa18.53■□□□□ 0.56
SF3A2-201ENST00000221494 KMT5BQ4FZB7 885 aa18.53■□□□□ 0.56
SF3A2-201ENST00000221494 AGXT2Q9BYV1 514 aa18.53■□□□□ 0.56
SF3A2-201ENST00000221494 NUP188Q5SRE5 1749 aa18.53■□□□□ 0.56
SF3A2-201ENST00000221494 SPEF2Q9C093 1822 aa18.53■□□□□ 0.56
SF3A2-201ENST00000221494 SNW1Q13573 536 aaKnown RBP18.53■□□□□ 0.56
SF3A2-201ENST00000221494 RABL6Q3YEC7 729 aaPredicted RBP18.53■□□□□ 0.56
SF3A2-201ENST00000221494 ERVV-1B6SEH8 477 aa18.52■□□□□ 0.56
SF3A2-201ENST00000221494 JAK2O60674 1132 aa18.52■□□□□ 0.56
SF3A2-201ENST00000221494 Q6ZUG5 572 aa18.52■□□□□ 0.56
SF3A2-201ENST00000221494 ZNF589Q86UQ0 364 aaPredicted RBP18.52■□□□□ 0.56
SF3A2-201ENST00000221494 DZIP3Q86Y13 1208 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms