RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 IL25Q9H293 177 aa13.67□□□□□ -0.22
CDKL1-201ENST00000216378 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
CDKL1-201ENST00000216378 NDUFB9Q9Y6M9 179 aa13.67□□□□□ -0.22
CDKL1-201ENST00000216378 SALL3Q9BXA9 1300 aa13.66□□□□□ -0.22
CDKL1-201ENST00000216378 L1TD1Q5T7N2 865 aaKnown RBP13.66□□□□□ -0.22
CDKL1-201ENST00000216378 PI16Q6UXB8 463 aa13.66□□□□□ -0.22
CDKL1-201ENST00000216378 CNKSR2Q8WXI2 1034 aa13.66□□□□□ -0.22
CDKL1-201ENST00000216378 EAF2Q96CJ1 260 aaPredicted RBP13.66□□□□□ -0.22
CDKL1-201ENST00000216378 FAM84BQ96KN1 310 aaPredicted RBP13.66□□□□□ -0.22
CDKL1-201ENST00000216378 CCDC8Q9H0W5 538 aaPredicted RBP13.66□□□□□ -0.22
CDKL1-201ENST00000216378 ZHX1Q9UKY1 873 aaPredicted RBP13.66□□□□□ -0.22
CDKL1-201ENST00000216378 ZBTB12Q9Y330 459 aaPredicted RBP13.66□□□□□ -0.22
CDKL1-201ENST00000216378 MROH5Q6ZUA9 1318 aa13.65□□□□□ -0.22
CDKL1-201ENST00000216378 LTBP3Q9NS15 1303 aa13.65□□□□□ -0.22
CDKL1-201ENST00000216378 CIAO1O76071 339 aa13.65□□□□□ -0.22
CDKL1-201ENST00000216378 DDNO94850 711 aaPredicted RBP13.65□□□□□ -0.22
CDKL1-201ENST00000216378 IL15P40933 162 aaPredicted RBP13.65□□□□□ -0.22
CDKL1-201ENST00000216378 KCNJ4P48050 445 aa13.65□□□□□ -0.22
CDKL1-201ENST00000216378 G3BP1Q13283 466 aaKnown RBP eCLIP13.65□□□□□ -0.22
CDKL1-201ENST00000216378 TMC4Q7Z404 712 aa13.65□□□□□ -0.22
CDKL1-201ENST00000216378 A0A1B0GUL7 405 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 ECE2O60344 883 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 PHKA1P46020 1223 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 GRIK5Q16478 980 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 SOGA3Q5TF21 947 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 CC2D2BQ6DHV5 1058 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 PLCD3Q8N3E9 789 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 MAP7D2Q96T17 732 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 DBNDD2Q9BQY9 259 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 CEP126Q9P2H0 1117 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 ATP2B4P23634 1241 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 CXCL9Q07325 125 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 SCARF1Q14162 830 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 ATP2B3Q16720 1220 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 NEUROD6Q96NK8 337 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 ZC3H12CQ9C0D7 883 aaKnown RBP13.64□□□□□ -0.23
CDKL1-201ENST00000216378 ANKRD2Q9GZV1 360 aa13.64□□□□□ -0.23
CDKL1-201ENST00000216378 DBNLQ9UJU6 430 aaKnown RBP13.64□□□□□ -0.23
CDKL1-201ENST00000216378 COL1A1P02452 1464 aaPredicted RBP13.64□□□□□ -0.23
CDKL1-201ENST00000216378 TMX4Q9H1E5 349 aaPredicted RBP13.63□□□□□ -0.23
CDKL1-201ENST00000216378 HDAC5Q9UQL6 1122 aa13.63□□□□□ -0.23
CDKL1-201ENST00000216378 FZD9O00144 591 aa13.63□□□□□ -0.23
CDKL1-201ENST00000216378 DMTNQ08495 405 aa13.63□□□□□ -0.23
CDKL1-201ENST00000216378 PUM3Q15397 648 aaKnown RBP13.63□□□□□ -0.23
CDKL1-201ENST00000216378 TNNI3KQ59H18 835 aa13.63□□□□□ -0.23
CDKL1-201ENST00000216378 AACSQ86V21 672 aa13.63□□□□□ -0.23
CDKL1-201ENST00000216378 XAGE2Q96GT9 111 aa13.63□□□□□ -0.23
CDKL1-201ENST00000216378 LEMD3Q9Y2U8 911 aa13.63□□□□□ -0.23
CDKL1-201ENST00000216378 FPGT-TNNI3KV9GXZ4 949 aa13.63□□□□□ -0.23
CDKL1-201ENST00000216378 TIAM2Q8IVF5 1701 aa13.62□□□□□ -0.23
CDKL1-201ENST00000216378 EGFRP00533 1210 aa13.62□□□□□ -0.23
CDKL1-201ENST00000216378 BECN1Q14457 450 aa13.62□□□□□ -0.23
CDKL1-201ENST00000216378 KIF1BPQ96EK5 621 aa13.62□□□□□ -0.23
CDKL1-201ENST00000216378 CD209Q9NNX6 404 aa13.62□□□□□ -0.23
CDKL1-201ENST00000216378 MED23Q9ULK4 1368 aa13.62□□□□□ -0.23
CDKL1-201ENST00000216378 ZNF609O15014 1411 aa13.62□□□□□ -0.23
CDKL1-201ENST00000216378 POTECB2RU33 542 aa13.62□□□□□ -0.23
CDKL1-201ENST00000216378 PSMD14O00487 310 aa13.62□□□□□ -0.23
CDKL1-201ENST00000216378 FRAT2O75474 233 aaPredicted RBP13.62□□□□□ -0.23
CDKL1-201ENST00000216378 RBM25P49756 843 aaKnown RBP13.62□□□□□ -0.23
CDKL1-201ENST00000216378 CERS5Q8N5B7 392 aa13.62□□□□□ -0.23
CDKL1-201ENST00000216378 PI4K2BQ8TCG2 481 aa13.62□□□□□ -0.23
CDKL1-201ENST00000216378 USP26Q9BXU7 913 aa13.62□□□□□ -0.23
CDKL1-201ENST00000216378 PCDHAC2Q9Y5I4 1007 aa13.62□□□□□ -0.23
CDKL1-201ENST00000216378 GJA3Q9Y6H8 435 aa13.62□□□□□ -0.23
CDKL1-201ENST00000216378 UBE4AQ14139 1066 aa13.61□□□□□ -0.23
CDKL1-201ENST00000216378 PPP4R3BQ5MIZ7 849 aa13.61□□□□□ -0.23
CDKL1-201ENST00000216378 EDC3Q96F86 508 aaKnown RBP13.61□□□□□ -0.23
CDKL1-201ENST00000216378 OSBPL3Q9H4L5 887 aa13.61□□□□□ -0.23
CDKL1-201ENST00000216378 DCAF8L1A6NGE4 600 aa13.6□□□□□ -0.23
CDKL1-201ENST00000216378 FBXO33Q7Z6M2 555 aa13.6□□□□□ -0.23
CDKL1-201ENST00000216378 NIM1KQ8IY84 436 aa13.6□□□□□ -0.23
CDKL1-201ENST00000216378 LPIN2Q92539 896 aa13.6□□□□□ -0.23
CDKL1-201ENST00000216378 FBXW7Q969H0 707 aa13.6□□□□□ -0.23
CDKL1-201ENST00000216378 NMRK2Q9NPI5 230 aa13.6□□□□□ -0.23
CDKL1-201ENST00000216378 ZNRF3Q9ULT6 936 aa13.6□□□□□ -0.23
CDKL1-201ENST00000216378 DICER1Q9UPY3 1922 aaKnown RBP13.6□□□□□ -0.23
CDKL1-201ENST00000216378 RAB11FIP3O75154 756 aa13.6□□□□□ -0.23
CDKL1-201ENST00000216378 CHGBP05060 677 aa13.6□□□□□ -0.23
CDKL1-201ENST00000216378 GTF2IP78347 998 aa13.6□□□□□ -0.23
CDKL1-201ENST00000216378 CCDC102BQ68D86 513 aa13.6□□□□□ -0.23
CDKL1-201ENST00000216378 JDP2Q8WYK2 163 aa13.6□□□□□ -0.23
CDKL1-201ENST00000216378 SNRKQ9NRH2 765 aa13.6□□□□□ -0.23
CDKL1-201ENST00000216378 POTEIP0CG38 1075 aa13.59□□□□□ -0.23
CDKL1-201ENST00000216378 POTEJP0CG39 1038 aa13.59□□□□□ -0.23
CDKL1-201ENST00000216378 YY1P25490 414 aa13.59□□□□□ -0.23
CDKL1-201ENST00000216378 CHMLP26374 656 aa13.59□□□□□ -0.23
CDKL1-201ENST00000216378 HIBADHP31937 336 aaKnown RBP13.59□□□□□ -0.23
CDKL1-201ENST00000216378 NOL8Q76FK4 1167 aaKnown RBP13.59□□□□□ -0.23
CDKL1-201ENST00000216378 SCAF8Q9UPN6 1271 aaKnown RBP13.59□□□□□ -0.23
CDKL1-201ENST00000216378 AOX1Q06278 1338 aa13.59□□□□□ -0.23
CDKL1-201ENST00000216378 ZNF646O15015 1829 aaPredicted RBP13.59□□□□□ -0.23
CDKL1-201ENST00000216378 CHAF1AQ13111 956 aaPredicted RBP13.59□□□□□ -0.23
CDKL1-201ENST00000216378 ANO2Q9NQ90 1003 aa13.59□□□□□ -0.23
CDKL1-201ENST00000216378 STAP2Q9UGK3 403 aa13.59□□□□□ -0.23
CDKL1-201ENST00000216378 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
CDKL1-201ENST00000216378 PALD1Q9ULE6 856 aa13.59□□□□□ -0.23
CDKL1-201ENST00000216378 DTNBO60941 627 aa13.58□□□□□ -0.24
CDKL1-201ENST00000216378 IFIT2P09913 472 aaKnown RBP13.58□□□□□ -0.24
CDKL1-201ENST00000216378 SCNN1DP51172 638 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms