RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 TRIM44Q96DX7 344 aaPredicted RBP30.78■■■□□ 2.52
RTN4R-201ENST00000043402 GPHNQ9NQX3 736 aaPredicted RBP30.78■■■□□ 2.52
RTN4R-201ENST00000043402 ATRNO75882 1429 aa30.77■■■□□ 2.52
RTN4R-201ENST00000043402 PDIA3P30101 505 aaKnown RBP30.77■■■□□ 2.52
RTN4R-201ENST00000043402 CCDC152Q4G0S7 254 aa30.77■■■□□ 2.52
RTN4R-201ENST00000043402 LINC00116Q8NCU8 138 aa30.77■■■□□ 2.52
RTN4R-201ENST00000043402 NCOA5Q9HCD5 579 aaKnown RBP30.77■■■□□ 2.52
RTN4R-201ENST00000043402 UBE3CQ15386 1083 aa30.76■■■□□ 2.52
RTN4R-201ENST00000043402 ZNF274Q96GC6 653 aaPredicted RBP30.76■■■□□ 2.52
RTN4R-201ENST00000043402 WWC3Q9ULE0 1092 aa30.76■■■□□ 2.52
RTN4R-201ENST00000043402 KCNQ4P56696 695 aa30.76■■■□□ 2.51
RTN4R-201ENST00000043402 BCL9LQ86UU0 1499 aa30.76■■■□□ 2.51
RTN4R-201ENST00000043402 ZNF532Q9HCE3 1301 aa30.75■■■□□ 2.51
RTN4R-201ENST00000043402 SLC5A1P13866 664 aa30.75■■■□□ 2.51
RTN4R-201ENST00000043402 PDE6AP16499 860 aa30.75■■■□□ 2.51
RTN4R-201ENST00000043402 LAMB2P55268 1798 aa30.75■■■□□ 2.51
RTN4R-201ENST00000043402 TCRBV5S4A2TA0A5A2 114 aa30.75■■■□□ 2.51
RTN4R-201ENST00000043402 RESTQ13127 1097 aa30.75■■■□□ 2.51
RTN4R-201ENST00000043402 MB21D2Q8IYB1 491 aaPredicted RBP30.75■■■□□ 2.51
RTN4R-201ENST00000043402 C8orf37Q96NL8 207 aa30.75■■■□□ 2.51
RTN4R-201ENST00000043402 RTL9Q8NET4 1388 aa30.74■■■□□ 2.51
RTN4R-201ENST00000043402 ELP1O95163 1332 aa30.74■■■□□ 2.51
RTN4R-201ENST00000043402 PTPDC1A2A3K4 754 aa30.74■■■□□ 2.51
RTN4R-201ENST00000043402 EVCP57679 992 aa30.74■■■□□ 2.51
RTN4R-201ENST00000043402 RASGRF1Q13972 1273 aa30.74■■■□□ 2.51
RTN4R-201ENST00000043402 FAM184AQ8NB25 1140 aa30.74■■■□□ 2.51
RTN4R-201ENST00000043402 SPATA5Q8NB90 893 aa30.74■■■□□ 2.51
RTN4R-201ENST00000043402 TFIP11Q9UBB9 837 aaKnown RBP30.74■■■□□ 2.51
RTN4R-201ENST00000043402 BCORQ6W2J9 1755 aa30.74■■■□□ 2.51
RTN4R-201ENST00000043402 COL4A1P02462 1669 aa30.74■■■□□ 2.51
RTN4R-201ENST00000043402 PTF1AQ7RTS3 328 aa30.73■■■□□ 2.51
RTN4R-201ENST00000043402 PDLIM2Q96JY6 352 aa30.73■■■□□ 2.51
RTN4R-201ENST00000043402 SALL1Q9NSC2 1324 aa30.73■■■□□ 2.51
RTN4R-201ENST00000043402 ZNF213O14771 459 aa30.73■■■□□ 2.51
RTN4R-201ENST00000043402 NBPF3Q9H094 633 aa30.73■■■□□ 2.51
RTN4R-201ENST00000043402 NAP1L2Q9ULW6 460 aaPredicted RBP30.73■■■□□ 2.51
RTN4R-201ENST00000043402 VPS72Q15906 364 aa30.72■■■□□ 2.51
RTN4R-201ENST00000043402 NGLY1Q96IV0 654 aa30.72■■■□□ 2.51
RTN4R-201ENST00000043402 H3BQV1 296 aa30.72■■■□□ 2.51
RTN4R-201ENST00000043402 ANTXR2P58335 489 aa30.72■■■□□ 2.51
RTN4R-201ENST00000043402 IFFO2Q5TF58 517 aa30.72■■■□□ 2.51
RTN4R-201ENST00000043402 ZNF652Q9Y2D9 606 aa30.72■■■□□ 2.51
RTN4R-201ENST00000043402 ZNF831Q5JPB2 1677 aa30.71■■■□□ 2.51
RTN4R-201ENST00000043402 ESPNB1AK53 854 aa30.71■■■□□ 2.51
RTN4R-201ENST00000043402 IGHMBP2P38935 993 aaKnown RBP30.71■■■□□ 2.51
RTN4R-201ENST00000043402 PRC1O43663 620 aa30.71■■■□□ 2.51
RTN4R-201ENST00000043402 HMGN5P82970 282 aaKnown RBP30.71■■■□□ 2.51
RTN4R-201ENST00000043402 CLEC4GQ6UXB4 293 aa30.71■■■□□ 2.51
RTN4R-201ENST00000043402 NCOA7Q8NI08 942 aa30.71■■■□□ 2.51
RTN4R-201ENST00000043402 SCAND2PQ9GZW5 306 aaPredicted RBP30.71■■■□□ 2.51
RTN4R-201ENST00000043402 PPFIA3O75145 1194 aa30.7■■■□□ 2.51
RTN4R-201ENST00000043402 LETM1O95202 739 aaPredicted RBP30.7■■■□□ 2.51
RTN4R-201ENST00000043402 MCM5P33992 734 aa30.7■■■□□ 2.51
RTN4R-201ENST00000043402 ANO8Q9HCE9 1232 aaPredicted RBP30.7■■■□□ 2.51
RTN4R-201ENST00000043402 SMIM5Q71RC9 77 aa30.69■■■□□ 2.5
RTN4R-201ENST00000043402 LEO1Q8WVC0 666 aaPredicted RBP30.69■■■□□ 2.5
RTN4R-201ENST00000043402 DENND2AQ9ULE3 1009 aa30.69■■■□□ 2.5
RTN4R-201ENST00000043402 DOCK2Q92608 1830 aa30.68■■■□□ 2.5
RTN4R-201ENST00000043402 BCAMP50895 628 aa30.68■■■□□ 2.5
RTN4R-201ENST00000043402 CHRNDQ07001 517 aa30.68■■■□□ 2.5
RTN4R-201ENST00000043402 NKX2-3Q8TAU0 364 aa30.68■■■□□ 2.5
RTN4R-201ENST00000043402 SPATA32Q96LK8 384 aa30.68■■■□□ 2.5
RTN4R-201ENST00000043402 ERFEQ4G0M1 354 aa30.68■■■□□ 2.5
RTN4R-201ENST00000043402 C3orf67Q6ZVT6 689 aa30.68■■■□□ 2.5
RTN4R-201ENST00000043402 STRBPQ96SI9 672 aaKnown RBP30.68■■■□□ 2.5
RTN4R-201ENST00000043402 FOSBP53539 338 aa30.67■■■□□ 2.5
RTN4R-201ENST00000043402 GIMAP6Q6P9H5 292 aa30.67■■■□□ 2.5
RTN4R-201ENST00000043402 TBC1D10CQ8IV04 446 aa30.67■■■□□ 2.5
RTN4R-201ENST00000043402 ZSCAN16Q9H4T2 348 aaPredicted RBP30.67■■■□□ 2.5
RTN4R-201ENST00000043402 NAA16Q6N069 864 aaPredicted RBP30.66■■■□□ 2.5
RTN4R-201ENST00000043402 RALYLQ86SE5 291 aaKnown RBP30.66■■■□□ 2.5
RTN4R-201ENST00000043402 APPP05067 770 aa30.66■■■□□ 2.5
RTN4R-201ENST00000043402 LIG1P18858 919 aa30.66■■■□□ 2.5
RTN4R-201ENST00000043402 MAGEB6Q8N7X4 407 aa30.66■■■□□ 2.5
RTN4R-201ENST00000043402 FUCA2Q9BTY2 467 aa30.66■■■□□ 2.5
RTN4R-201ENST00000043402 FDPSP14324 419 aaKnown RBP30.65■■■□□ 2.5
RTN4R-201ENST00000043402 CLCN1P35523 988 aa30.65■■■□□ 2.5
RTN4R-201ENST00000043402 HPS5Q9UPZ3 1129 aa30.65■■■□□ 2.5
RTN4R-201ENST00000043402 UBAP1LF5GYI3 381 aa30.65■■■□□ 2.5
RTN4R-201ENST00000043402 AIDAQ96BJ3 306 aa30.65■■■□□ 2.5
RTN4R-201ENST00000043402 MAP3K12Q12852 859 aa30.64■■■□□ 2.5
RTN4R-201ENST00000043402 TAF1P21675 1872 aa30.64■■■□□ 2.5
RTN4R-201ENST00000043402 CNTNAP4Q9C0A0 1308 aa30.64■■■□□ 2.49
RTN4R-201ENST00000043402 KLF18A0A0U1RQI7 1052 aa30.64■■■□□ 2.49
RTN4R-201ENST00000043402 ADD1P35611 737 aaKnown RBP30.64■■■□□ 2.49
RTN4R-201ENST00000043402 CARMIL3Q8ND23 1372 aa30.63■■■□□ 2.49
RTN4R-201ENST00000043402 WDR19Q8NEZ3 1342 aa30.63■■■□□ 2.49
RTN4R-201ENST00000043402 KIF3AQ9Y496 699 aa30.63■■■□□ 2.49
RTN4R-201ENST00000043402 FNBP4Q8N3X1 1017 aaPredicted RBP30.62■■■□□ 2.49
RTN4R-201ENST00000043402 PGBD1Q96JS3 809 aa30.62■■■□□ 2.49
RTN4R-201ENST00000043402 BCL2L12Q9HB09 334 aa30.62■■■□□ 2.49
RTN4R-201ENST00000043402 CDC5LQ99459 802 aaKnown RBP30.62■■■□□ 2.49
RTN4R-201ENST00000043402 EPB41L4AQ9HCS5 686 aaPredicted RBP30.62■■■□□ 2.49
RTN4R-201ENST00000043402 MYH15Q9Y2K3 1946 aa30.61■■■□□ 2.49
RTN4R-201ENST00000043402 BICDL1Q6ZP65 573 aa30.61■■■□□ 2.49
RTN4R-201ENST00000043402 CYB5R4Q7L1T6 521 aa30.61■■■□□ 2.49
RTN4R-201ENST00000043402 WTIPA6NIX2 430 aaPredicted RBP30.61■■■□□ 2.49
RTN4R-201ENST00000043402 SF3B3Q15393 1217 aaKnown RBP30.61■■■□□ 2.49
RTN4R-201ENST00000043402 TBC1D9BQ66K14 1250 aa30.61■■■□□ 2.49
RTN4R-201ENST00000043402 RAB11FIP4Q86YS3 637 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms