RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.01■□□□□ 0.31
RTFDC1-201ENST00000023939 SNAP23O00161 211 aa17.01■□□□□ 0.31
RTFDC1-201ENST00000023939 TM4SF1P30408 202 aa17.01■□□□□ 0.31
RTFDC1-201ENST00000023939 MAP3K12Q12852 859 aa17.01■□□□□ 0.31
RTFDC1-201ENST00000023939 AGXT2Q9BYV1 514 aa17.01■□□□□ 0.31
RTFDC1-201ENST00000023939 IDH1O75874 414 aaKnown RBP17.01■□□□□ 0.31
RTFDC1-201ENST00000023939 BCAMP50895 628 aa17.01■□□□□ 0.31
RTFDC1-201ENST00000023939 EXOSC10Q01780 885 aaKnown RBP17.01■□□□□ 0.31
RTFDC1-201ENST00000023939 CCDC83Q8IWF9 413 aa17.01■□□□□ 0.31
RTFDC1-201ENST00000023939 LARP6Q9BRS8 491 aaKnown RBP17.01■□□□□ 0.31
RTFDC1-201ENST00000023939 ANKRD2Q9GZV1 360 aa17.01■□□□□ 0.31
RTFDC1-201ENST00000023939 GNL3LQ9NVN8 582 aaKnown RBP17.01■□□□□ 0.31
RTFDC1-201ENST00000023939 ZNF532Q9HCE3 1301 aa17.01■□□□□ 0.31
RTFDC1-201ENST00000023939 E7EWF7 191 aa17■□□□□ 0.31
RTFDC1-201ENST00000023939 PHF14O94880 888 aa17■□□□□ 0.31
RTFDC1-201ENST00000023939 IMMTQ16891 758 aaKnown RBP17■□□□□ 0.31
RTFDC1-201ENST00000023939 ZMYM6O95789 1325 aa17■□□□□ 0.31
RTFDC1-201ENST00000023939 TRIM37O94972 964 aa16.99■□□□□ 0.31
RTFDC1-201ENST00000023939 FGAP02671 866 aa16.99■□□□□ 0.31
RTFDC1-201ENST00000023939 ALX1Q15699 326 aa16.99■□□□□ 0.31
RTFDC1-201ENST00000023939 WWC3Q9ULE0 1092 aa16.99■□□□□ 0.31
RTFDC1-201ENST00000023939 PDS5AQ29RF7 1337 aaKnown RBP16.99■□□□□ 0.31
RTFDC1-201ENST00000023939 SEMA3EO15041 775 aa16.99■□□□□ 0.31
RTFDC1-201ENST00000023939 GYS1P13807 737 aa16.98■□□□□ 0.31
RTFDC1-201ENST00000023939 CAVIN4Q5BKX8 364 aa16.98■□□□□ 0.31
RTFDC1-201ENST00000023939 TTLL5Q6EMB2 1281 aa16.98■□□□□ 0.31
RTFDC1-201ENST00000023939 Q6ZUG5 572 aa16.98■□□□□ 0.31
RTFDC1-201ENST00000023939 FBXO33Q7Z6M2 555 aa16.98■□□□□ 0.31
RTFDC1-201ENST00000023939 CNBD1Q8NA66 436 aa16.98■□□□□ 0.31
RTFDC1-201ENST00000023939 TCEANC2Q96MN5 208 aa16.98■□□□□ 0.31
RTFDC1-201ENST00000023939 STRBPQ96SI9 672 aaKnown RBP16.98■□□□□ 0.31
RTFDC1-201ENST00000023939 WDR19Q8NEZ3 1342 aa16.98■□□□□ 0.31
RTFDC1-201ENST00000023939 TNRC6CQ9HCJ0 1690 aaKnown RBP16.97■□□□□ 0.31
RTFDC1-201ENST00000023939 SOCS7O14512 581 aa16.97■□□□□ 0.31
RTFDC1-201ENST00000023939 STX6O43752 255 aa16.97■□□□□ 0.31
RTFDC1-201ENST00000023939 ZSCAN22P10073 491 aaPredicted RBP16.97■□□□□ 0.31
RTFDC1-201ENST00000023939 SYT1P21579 422 aa16.97■□□□□ 0.31
RTFDC1-201ENST00000023939 GJB2P29033 226 aa16.97■□□□□ 0.31
RTFDC1-201ENST00000023939 MCTP1Q6DN14 999 aa16.97■□□□□ 0.31
RTFDC1-201ENST00000023939 NECAB1Q8N987 351 aa16.97■□□□□ 0.31
RTFDC1-201ENST00000023939 LMBRD1Q9NUN5 540 aa16.97■□□□□ 0.31
RTFDC1-201ENST00000023939 LAMA4Q16363 1823 aa16.97■□□□□ 0.31
RTFDC1-201ENST00000023939 A0A0G2JLW4 131 aa16.96■□□□□ 0.31
RTFDC1-201ENST00000023939 PLSCR1O15162 318 aa16.96■□□□□ 0.31
RTFDC1-201ENST00000023939 TAF1P21675 1872 aa16.96■□□□□ 0.31
RTFDC1-201ENST00000023939 EVCP57679 992 aa16.96■□□□□ 0.31
RTFDC1-201ENST00000023939 TXNRD1Q16881 649 aa16.96■□□□□ 0.31
RTFDC1-201ENST00000023939 KLHL40Q2TBA0 621 aa16.96■□□□□ 0.31
RTFDC1-201ENST00000023939 PNPLA7Q6ZV29 1317 aa16.96■□□□□ 0.31
RTFDC1-201ENST00000023939 GTF3C6Q969F1 213 aa16.96■□□□□ 0.31
RTFDC1-201ENST00000023939 FAM84BQ96KN1 310 aaPredicted RBP16.96■□□□□ 0.31
RTFDC1-201ENST00000023939 DENND2AQ9ULE3 1009 aa16.96■□□□□ 0.31
RTFDC1-201ENST00000023939 MYO5AQ9Y4I1 1855 aaKnown RBP16.96■□□□□ 0.31
RTFDC1-201ENST00000023939 PDCP20941 246 aa16.96■□□□□ 0.3
RTFDC1-201ENST00000023939 PRR5LQ6MZQ0 368 aa16.96■□□□□ 0.3
RTFDC1-201ENST00000023939 PROM2Q8N271 834 aa16.96■□□□□ 0.3
RTFDC1-201ENST00000023939 MAGEB6Q8N7X4 407 aa16.96■□□□□ 0.3
RTFDC1-201ENST00000023939 AIDAQ96BJ3 306 aa16.96■□□□□ 0.3
RTFDC1-201ENST00000023939 CHMP4CQ96CF2 233 aa16.96■□□□□ 0.3
RTFDC1-201ENST00000023939 ZNF213O14771 459 aa16.95■□□□□ 0.3
RTFDC1-201ENST00000023939 PFKFB2O60825 505 aa16.95■□□□□ 0.3
RTFDC1-201ENST00000023939 GNAT2P19087 354 aa16.95■□□□□ 0.3
RTFDC1-201ENST00000023939 GYG1P46976 350 aa16.95■□□□□ 0.3
RTFDC1-201ENST00000023939 GRAPQ13588 217 aa16.95■□□□□ 0.3
RTFDC1-201ENST00000023939 CRY2Q49AN0 593 aa16.95■□□□□ 0.3
RTFDC1-201ENST00000023939 TMED8Q6PL24 325 aaPredicted RBP16.95■□□□□ 0.3
RTFDC1-201ENST00000023939 GRAPLQ8TC17 118 aaPredicted RBP16.95■□□□□ 0.3
RTFDC1-201ENST00000023939 LLPHQ9BRT6 129 aaKnown RBP16.95■□□□□ 0.3
RTFDC1-201ENST00000023939 PATL2C9JE40 543 aaKnown RBP16.94■□□□□ 0.3
RTFDC1-201ENST00000023939 IGSF3O75054 1194 aa16.94■□□□□ 0.3
RTFDC1-201ENST00000023939 MB21D2Q8IYB1 491 aaPredicted RBP16.94■□□□□ 0.3
RTFDC1-201ENST00000023939 BRF1Q92994 677 aa16.94■□□□□ 0.3
RTFDC1-201ENST00000023939 ATP6V1DQ9Y5K8 247 aa16.94■□□□□ 0.3
RTFDC1-201ENST00000023939 COL1A1P02452 1464 aaPredicted RBP16.94■□□□□ 0.3
RTFDC1-201ENST00000023939 IRS2Q9Y4H2 1338 aa16.93■□□□□ 0.3
RTFDC1-201ENST00000023939 NPHP1O15259 732 aa16.93■□□□□ 0.3
RTFDC1-201ENST00000023939 NCOA7Q8NI08 942 aa16.93■□□□□ 0.3
RTFDC1-201ENST00000023939 ZNF274Q96GC6 653 aaPredicted RBP16.93■□□□□ 0.3
RTFDC1-201ENST00000023939 MTMR6Q9Y217 621 aa16.93■□□□□ 0.3
RTFDC1-201ENST00000023939 F13A1P00488 732 aa16.93■□□□□ 0.3
RTFDC1-201ENST00000023939 MCM5P33992 734 aa16.93■□□□□ 0.3
RTFDC1-201ENST00000023939 FGD1P98174 961 aa16.93■□□□□ 0.3
RTFDC1-201ENST00000023939 CCDC24Q8N4L8 307 aa16.93■□□□□ 0.3
RTFDC1-201ENST00000023939 LRP2BPQ9P2M1 347 aa16.93■□□□□ 0.3
RTFDC1-201ENST00000023939 ISY1Q9ULR0 285 aaKnown RBP16.93■□□□□ 0.3
RTFDC1-201ENST00000023939 WTIPA6NIX2 430 aaPredicted RBP16.92■□□□□ 0.3
RTFDC1-201ENST00000023939 MBD4O95243 580 aa16.92■□□□□ 0.3
RTFDC1-201ENST00000023939 SERPINB2P05120 415 aa16.92■□□□□ 0.3
RTFDC1-201ENST00000023939 ST5P78524 1137 aa16.92■□□□□ 0.3
RTFDC1-201ENST00000023939 C15orf52Q6ZUT6 534 aaKnown RBP16.92■□□□□ 0.3
RTFDC1-201ENST00000023939 VPS37DQ86XT2 251 aa16.92■□□□□ 0.3
RTFDC1-201ENST00000023939 TMEM87AQ8NBN3 555 aa16.92■□□□□ 0.3
RTFDC1-201ENST00000023939 NBPF3Q9H094 633 aa16.92■□□□□ 0.3
RTFDC1-201ENST00000023939 LEMD3Q9Y2U8 911 aa16.92■□□□□ 0.3
RTFDC1-201ENST00000023939 KLRG2A4D1S0 409 aaPredicted RBP16.91■□□□□ 0.3
RTFDC1-201ENST00000023939 HIBADHP31937 336 aaKnown RBP16.91■□□□□ 0.3
RTFDC1-201ENST00000023939 HAND2P61296 217 aa16.91■□□□□ 0.3
RTFDC1-201ENST00000023939 FOXD4L5Q5VV16 416 aaPredicted RBP16.91■□□□□ 0.3
RTFDC1-201ENST00000023939 IFNL3Q8IZI9 196 aa16.91■□□□□ 0.3
RTFDC1-201ENST00000023939 SMARCC2Q8TAQ2 1214 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms