RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Adcy3Q8VHH7 1145 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Tgs1Q923W1 853 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 AvenQ9D9K3 342 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Dusp10Q9ESS0 483 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 NagaQ9QWR8 415 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Stat2Q9WVL2 923 aa8.56□□□□□ -1.04
Bdnf-204ENSMUST00000111044 XpcP51612 930 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Ric8aQ3TIR3 530 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Serpinb6Q60854 378 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 EsrrbQ61539 433 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Q66JV7 365 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Mrpl50Q8VDT9 159 aaKnown RBP8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Tpcn1Q9EQJ0 817 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 GclcP97494 637 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Ggnbp2Q5SV77 696 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Snd1Q78PY7 910 aaKnown RBP8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Hpcal4Q8BGZ1 191 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Zswim4Q8C7B8 1101 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Ccdc158Q8CDI6 1109 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Six6os1Q9CTN5 574 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Irgm2A0A140LIF8 407 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Hnrnph2P70333 449 aaKnown RBP8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Wdr60Q8C761 999 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 LgsnQ8CIX8 563 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Ebag9Q9D0V7 213 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Stag1Q9D3E6 1258 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Arhgef28P97433 1693 aa8.55□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Ccdc40Q8BI79 1192 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Zfp317Q8C0Q5 607 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Hgh1Q8C3I8 393 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Fbxo18Q8K2I9 1042 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Tcof1O08784 1320 aaKnown RBP8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Tbc1d2B1AVH7 922 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Nrg3O35181 713 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Slc1a4O35874 532 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Usp5P56399 858 aaKnown RBP8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Top1Q04750 767 aaKnown RBP8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Lrsam1Q80ZI6 727 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Ccdc181Q80ZU5 509 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Epc1Q8C9X6 813 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Rsph6aQ8CDR2 708 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 CactinQ9CS00 772 aaKnown RBP8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Naa16Q9DBB4 864 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Ccdc152E9PX14 254 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 AppP12023 770 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Stim1P70302 685 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Q3UJC8 639 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Mybpc2Q5XKE0 1136 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Gnl3lQ6PGG6 577 aaKnown RBP8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 IqcgQ80W32 419 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Ddx42Q810A7 929 aaKnown RBP8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Traf3ip3Q8C0G2 513 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Rhot2Q8JZN7 620 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Arhgef6Q8K4I3 771 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Cdc45Q9Z1X9 566 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 NktrP30415 1453 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Abca14E9Q8F8 1683 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Gm15262A0A140LIQ5 728 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Ier5O89113 308 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Slc7a3P70423 618 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Chpf2Q3UU43 768 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Tsr1Q5SWD9 803 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Fam83gQ5SWY7 812 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 LnpkQ7TQ95 425 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Znf526Q8BI66 675 aa8.54□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Uhrf1bp1lA2RSJ4 1457 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 IntuQ059U7 942 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Tax1bp1Q3UKC1 814 aaKnown RBP8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Baiap3Q80TT2 1134 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Vipas39Q8BGQ1 491 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Gle1Q8R322 699 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 NapgQ9CWZ7 312 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Armc9Q9D2I5 817 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Klhl40Q9D783 621 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 C2cd2E9Q3C1 696 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 LyarQ08288 388 aaKnown RBP8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Iws1Q8C1D8 766 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Rufy2Q8R4C2 606 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 SnrkQ8VDU5 748 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Trap1Q9CQN1 706 aaKnown RBP8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 SelenooQ9DBC0 667 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Nfu1Q9QZ23 255 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Magi2Q9WVQ1 1275 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Fsd1Q7TPM6 496 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Erc1Q99MI1 1120 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Ndufab1Q9CR21 156 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 KynuQ9CXF0 464 aa8.53□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Itsn1Q9Z0R4 1714 aa8.52□□□□□ -1.04
Bdnf-204ENSMUST00000111044 Map2k1P31938 393 aa8.52□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Gngt1Q61012 74 aa8.52□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Zc3h6Q8BYK8 1177 aa8.52□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Vps37cQ8R105 352 aa8.52□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Chchd3Q9CRB9 227 aaKnown RBP8.52□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Desi2Q9D291 194 aa8.52□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Uchl5Q9WUP7 329 aa8.52□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Tulp1Q9Z273 543 aa8.52□□□□□ -1.05
Bdnf-204ENSMUST00000111044 MyclP10166 368 aa8.52□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Surf6P70279 355 aaKnown RBP8.52□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Sptlc2P97363 560 aaKnown RBP8.52□□□□□ -1.05
Bdnf-204ENSMUST00000111044 Exoc5Q3TPX4 708 aa8.52□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms